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Report for CCDS73242.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73242.1 Public Homo sapiens 11 ART5 24 110 108 CCDS HistoryNCBI Gene:116969Re-query CCDS DB by CCDS ID:73242.1Re-query CCDS DB by GeneID:116969See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73242.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000397067.7 ENSP00000380257.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000397067.7Link to Ensembl Protein Viewer:ENSP00000380257.3Re-query CCDS DB by Nucleotide ID:ENST00000397067Re-query CCDS DB by Protein ID:ENSP00000380257
Original member Current member NCBI NM_001297668.2 NP_001284597.1 Accepted alive Link to Nucleotide Sequence:NM_001297668.2Link to Protein Sequence:NP_001284597.1Re-query CCDS DB by Nucleotide ID:NM_001297668Re-query CCDS DB by Protein ID:NP_001284597Link to BLAST:NP_001284597.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001284597.1 239 Q96L15-2 239 100% 0 0

Chromosomal Locations for CCDS 73242.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 3638816 3638919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3639003 3639035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3639846 3640371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3641806 3641862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (720 nt):
ATGGCGCTGGCGGCTTTGATGATCGCCCTCGGCAGCCTCGGCCTCCACACCTGGCAGGCCCAGGCTGTTC
CCATCCTGCCCCTGGGCCTGGCTCCAGACACCTTTGACGATACCTATGTGGGTTGTGCAGAGGAGATGGA
GGAGAAGGCAGCCCCCCTGCTAAAGGAGGAAATGGCCCACCATGCCCTGCTGCGGGAATCCTGGGAGGCA
GCCCAGGAGACCTGGGAGGACAAGCGTCGAGGGCTTACCTTGCCCCCTGGCTTCAAAGCCCAGAATGGAA
TAGCCATTATGGTCTACACCAACTCATCGAACACCTTGTACTGGGAGTTGAATCAGGCCGTGCGGACGGG
CGGAGGCTCCCGGGAGCTCTACATGAGGCACTTTCCCTTCAAGGCCCTGCATTTCTACCTGATCCGGGCC
CTGCAGCTGCTGCGAGGCAGTGGGGGCTGCAGCAGGGGACCTGGGGAGGTGGTGTTCCGAGGTGTGGGCA
GCCTTCGCTTTGAACCCAAGAGGCTGGGAGACTCTGTCCGCTTGGGCCAGTTTGCCTCCAGCTCCCTGGA
TAAGGCAGTGGCCCACAGATTTGGGGAGAAGAGGCGGGGCTGTGTGTCTGCGCCAGGGGTGCAGCTAGGG
TCACAATCTGAGGGGGCCTCCTCTCTGCCCCCCTGGAAGACTCTGCTCTTGGCCCCTGGAGAGTTCCAGC
TCTCAGGGGTTGGGCCCTGA

Translation (239 aa):
MALAALMIALGSLGLHTWQAQAVPILPLGLAPDTFDDTYVGCAEEMEEKAAPLLKEEMAHHALLRESWEA
AQETWEDKRRGLTLPPGFKAQNGIAIMVYTNSSNTLYWELNQAVRTGGGSRELYMRHFPFKALHFYLIRA
LQLLRGSGGCSRGPGEVVFRGVGSLRFEPKRLGDSVRLGQFASSSLDKAVAHRFGEKRRGCVSAPGVQLG
SQSEGASSLPPWKTLLLAPGEFQLSGVGP


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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