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Report for CCDS73083.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73083.1 Public Homo sapiens 10 EPC1 24 110 108 CCDS HistoryNCBI Gene:80314Re-query CCDS DB by CCDS ID:73083.1Re-query CCDS DB by GeneID:80314See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73083.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000375110.6 ENSP00000364251.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000375110.6Link to Ensembl Protein Viewer:ENSP00000364251.2Re-query CCDS DB by Nucleotide ID:ENST00000375110Re-query CCDS DB by Protein ID:ENSP00000364251
Original member Current member NCBI NM_001282391.3 NP_001269320.1 Accepted alive Link to Nucleotide Sequence:NM_001282391.3Link to Protein Sequence:NP_001269320.1Re-query CCDS DB by Nucleotide ID:NM_001282391Re-query CCDS DB by Protein ID:NP_001269320Link to BLAST:NP_001269320.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269320.1 763 Q9H2F5-3 763 100% 0 0

Chromosomal Locations for CCDS 73083.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 32269063 32269135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 32271554 32271917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 32272026 32272167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 32273163 32273281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 32284698 32285050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 32286694 32286842 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 32286926 32287015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 32287098 32287274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 32291163 32291322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 32292496 32292644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 32292988 32293194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 32293592 32293737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 32305772 32305931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 32378491 32378493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2292 nt):
ATGGAACATCATCTTCAGCGGGCTATTTCAGCACAGCAGGTGTATGGCGAGAAGAGGGATAATATGGTTA
TACCGGTCCCAGAGGCAGAAAGTAATATTGCTTACTATGAGTCTATATATCCTGGGGAATTTAAGATGCC
AAAGCAGCTCATTCACATACAGCCTTTTAGTTTGGATGCTGAACAGCCTGATTATGATTTGGATTCTGAA
GATGAAGTATTTGTGAATAAACTGAAAAAGAAAATGGACATCTGCCCATTGCAATTTGAGGAGATGATTG
ACCGCCTAGAAAAAGGCAGTGGTCAGCAGCCAGTCAGTCTGCAGGAAGCCAAACTACTGCTAAAAGAAGA
TGATGAACTAATTAGAGAAGTTTATGAATATTGGATTAAAAAGAGAAAAAACTGTCGAGGGCCATCTCTT
ATTCCATCAGTAAAACAAGAGAAGCGAGATGGTTCCAGCACAAATGATCCTTATGTGGCTTTTAGAAGGC
GTACTGAAAAAATGCAGACTCGAAAAAATCGCAAAAATGATGAAGCCTCTTACGAAAAAATGCTTAAGCT
GCGACGAGATCTAAGTCGAGCTGTTACTATTCTAGAGATGATAAAAAGAAGAGAAAAAAGTAAAAGAGAG
CTATTGCACTTAACACTGGAAATTATGGAAAAGAGGTATAATTTGGGCGACTACAATGGAGAGATCATGT
CTGAGGTTATGGCACAGAGACAGCCAATGAAACCTACTTATGCCATCCCCATCATCCCTATTACTAATAG
CAGTCAATTTAAACACCAGGAAGCAATGGATGTGAAGGAGTTCAAAGTTAATAAGCAAGATAAAGCCGAT
CTTATCCGACCGAAACGGAAATATGAAAAGAAGCCCAAAGTCTTACCATCGTCTGCCGCTGCTACTCCCC
AACAGACGAGTCCTGCTGCACTGCCAGTCTTCAATGCTAAAGATCTGAATCAGTATGACTTTCCCAGCTC
AGACGAAGAACCTCTCTCCCAGGTTTTGTCTGGCTCTTCGGAAGCTGAGGAAGACAATGATCCTGATGGT
CCTTTTGCTTTCCGTAGGAAAGCAGGCTGTCAGTACTATGCTCCTCACTTAGACCAAACTGGCAACTGGC
CTTGGACTAGTCCTAAAGATGGAGGATTAGGGGATGTGCGATATAGATACTGCTTAACTACTCTCACCGT
ACCCCAAAGGTGTATTGGATTTGCACGAAGACGGGTTGGGCGCGGTGGAAGGGTCTTACTGGACAGAGCT
CATTCAGACTATGACAGTGTGTTTCACCATCTGGATTTGGAAATGCTTTCCTCACCACAACATTCTCCAG
TCAATCAGTTTGCCAATACCTCAGAAACAAATACCTCGGACAAATCTTTCTCTAAAGACCTCAGTCAGAT
ACTAGTCAATATCAAATCATGTAGATGGCGGCATTTTAGGCCTCGGACACCATCCCTACATGACAGTGAC
AATGATGAACTCTCCTGTAGAAAATTATATAGGAGTATAAACCGAACAGGAACAGCACAACCTGGGACCC
AGACATGCAGTACCTCTACGCAAAGTAAAAGTAGCAGTGGTTCAGCACACTTTGCATTTACAGCCGAACA
ATACCAGCAACATCAACAGCAACTGGCACTCATGCAGAAACAGCAGCTTGCACAAATTCAGCAACAGCAA
GCAAATAGTAATTCCTCCACCAACACATCACAGGGTTTTGTTTCTAAGACTTTGGATTCTGCTAGTGCAC
AGTTTGCTGCTTCTGCTTTGGTGACATCAGAACAACTGATGGGATTCAAGATGAAGGATGATGTGGTGCT
TGGAATCGGGGTGAATGGCGTCCTTCCAGCCTCAGGAGTATACAAGGGCTTACACCTCAGTAGTACTACA
CCAACAGCACTTGTACATACAAGTCCATCAACGGCAGGTTCAGCTTTGTTACAGCCTTCAAATATTACAC
AGACTTCAAGTTCCCACAGTGCACTGAGTCATCAAGTAACTGCTGCCAATTCTGCAACAACTCAGGTTCT
GATTGGGAACAACATTCGATTAACTGTACCTTCATCAGTTGCCACTGTAAACTCTATTGCCCCAATAAAT
GCACGACATATACCTAGGACTTTAAGTGCTGTTCCATCATCTGCCTTAAAGCTGGCCGCTGCAGCAAACT
GTCAAGTTTCCAAGGTCCCATCTTCATCCTCTGTAGATTCAGTTCCAAGGGAAAATCATGAATCAGAAAA
GCCAGCACTGAACAACATAGCAGACAACACAGTAGCGATGGAGGTGACGTAG

Translation (763 aa):
MEHHLQRAISAQQVYGEKRDNMVIPVPEAESNIAYYESIYPGEFKMPKQLIHIQPFSLDAEQPDYDLDSE
DEVFVNKLKKKMDICPLQFEEMIDRLEKGSGQQPVSLQEAKLLLKEDDELIREVYEYWIKKRKNCRGPSL
IPSVKQEKRDGSSTNDPYVAFRRRTEKMQTRKNRKNDEASYEKMLKLRRDLSRAVTILEMIKRREKSKRE
LLHLTLEIMEKRYNLGDYNGEIMSEVMAQRQPMKPTYAIPIIPITNSSQFKHQEAMDVKEFKVNKQDKAD
LIRPKRKYEKKPKVLPSSAAATPQQTSPAALPVFNAKDLNQYDFPSSDEEPLSQVLSGSSEAEEDNDPDG
PFAFRRKAGCQYYAPHLDQTGNWPWTSPKDGGLGDVRYRYCLTTLTVPQRCIGFARRRVGRGGRVLLDRA
HSDYDSVFHHLDLEMLSSPQHSPVNQFANTSETNTSDKSFSKDLSQILVNIKSCRWRHFRPRTPSLHDSD
NDELSCRKLYRSINRTGTAQPGTQTCSTSTQSKSSSGSAHFAFTAEQYQQHQQQLALMQKQQLAQIQQQQ
ANSNSSTNTSQGFVSKTLDSASAQFAASALVTSEQLMGFKMKDDVVLGIGVNGVLPASGVYKGLHLSSTT
PTALVHTSPSTAGSALLQPSNITQTSSSHSALSHQVTAANSATTQVLIGNNIRLTVPSSVATVNSIAPIN
ARHIPRTLSAVPSSALKLAAAANCQVSKVPSSSSVDSVPRENHESEKPALNNIADNTVAMEVT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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