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Report for CCDS72060.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
72060.1 Public Mus musculus 7 Dhx32 23 108 98 CCDS HistoryNCBI Gene:101437Re-query CCDS DB by CCDS ID:72060.1Re-query CCDS DB by GeneID:101437See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 72060.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000106139.7 ENSMUSP00000101745.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000106139.7Link to Ensembl Protein Viewer:ENSMUSP00000101745.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000106139Re-query CCDS DB by Protein ID:ENSMUSP00000101745
Original member NCBI NM_001286032.1 NP_001272961.1 Updated not alive Link to Nucleotide Sequence:NM_001286032.1Link to Protein Sequence:NP_001272961.1Re-query CCDS DB by Nucleotide ID:NM_001286032Re-query CCDS DB by Protein ID:NP_001272961
Current member NCBI NM_001286032.2 NP_001272961.1 Accepted alive Link to Nucleotide Sequence:NM_001286032.2Link to Protein Sequence:NP_001272961.1Re-query CCDS DB by Nucleotide ID:NM_001286032Re-query CCDS DB by Protein ID:NP_001272961Link to BLAST:NP_001272961.1

Chromosomal Locations for CCDS 72060.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 133721228 133721396 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 133722149 133722330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 133723042 133723229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 133724400 133724549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 133725204 133725395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 133733968 133734126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 133734209 133734308 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 133737189 133737434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 133742429 133742801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 133748843 133748919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1836 nt):
ATGGATGTGAATATCGGGCACGAAGTCGGCTATGTGATTCCTTTTGAGAACTGCTGCACCACTGAAACAA
TCCTGAGGTACTGTACTGATGACATGCTGCAGAGAGAGATGATGTCCAACCCTTTCCTGGGTAGCTATGG
CGTCATCATCTTGGACGATGTCCACGAGAGAAGCCTGGCGACTGACGTGCTGCTCGGACTCCTTAAAGAT
GTGCTGCTGGCAAGACCAGAGCTGAAGCTCATAGTTAACTGCTCGCCTCTCCTCACCAGTAAACTCAGTT
CCTACTATGGAGACGTGCCTGTCATAGAAGTGAGAAATAAGCACCCGGTGGAGGTGGTGTACCTTAGTGG
GGCTCAGAAGGATTCCTTCGAGTCTGTCATACGCCTTATCTTTGAAATCCACCGCTCGGGTGAGAAGGGT
GACGTTGTGGTCTTCCTGGCCTGTGAACAAGATATTGAAAAAACCTATGAACTTGTGTGTCAGGAAGGAT
CCAACTTAAACCCAGATGTGGGCGACCTGGTGGTCATCCCTTTGTATCCCAAAGAGAAGTGCAGCCTGTT
CAGGCCAGTGGACGAAACCGAGAAAAGATGCCAAGTGTATCAGAGACGGGTGGTGCTGACCACCAGCTGC
GGGGAGTCTCTGATCTGGAGCCACACGGTCAAATTTGTCATTGATGTTGGTCTGGAAAGAAGACAGGTAT
ATAACCCCCGGATCAGAGCCAACTCCCTCGTCCTGCAGCCCATCAGCCAAAGCCAAGCAGAGATCCGGAA
GCAGCTCCTCGGGTCTTCTCCCTCAGGAAAACTTTTCTGTCTGTACACTGAAGAATTTGCCTCCAAAGAC
ATGAGGCCCCTTAAGCCAGCGGAAATGCAGGAAGCCAACCTGACTAGCATGGTGCTCTTCATGAAGAGGG
TGGACATTGCAGGCCTGGGCCGCTGCGACTTCATGAACAGGCCAGCTCCAGAAAGCCTGATGCAGGCACT
GGAAGATTTAGATTACCTGGCAGCCCTGGACAACGATGGGAATCTCTCTGAGTTTGGAATCATCATGTCT
GAGTTTCCTCTGGATCCACAGCTCTCAAAGTCTATCTTAGCATCCTGTGAATTTGACTGTGTAGACGAAA
TGCTAACCATCGCTGCCATGGTAACAGCTCCCAGTTGCTTTTTGCACGTGCCTCATGGTGCTGAGGAGGC
TGCAGTGACTTGCTGGAAAACGTTCTTGCACCCTGAAGGTGATCACTTTACGCTCATCAATGTCTACAAT
GCCTACCAAGATACAGTTCTGAACTCTGCCAATGAACACTGTGTGGAGATGTGGTGTCACGATTGCTTCC
TCAGCTGCTCTGCTCTCAGGATGGCAGACGTTATCCGAGCAGAACTCTTAGAGATCATCAAGCGGATCGA
GCTTCCCTATGCAGAGCCTGCCTTTGGCTCCAAGGAAAACGGGTTGAACATCAAGAAAGCGCTGCTCTCT
GGGTACTTCATGCAGATTGCTCGGGATGTTGACGGGTCAGGTAACTACTTGATGCTTACACATAAGCAGG
TTGCTCAGCTGCATCCCTTATCAAGCTATTCCATCACCAAGAAGATGCCCGAGTGGGTCCTCTTCCACCA
GTTCAGCATATCTGAGAACAACTACATCAGGGTCGCCTCCGCAGTCTCCCCTGAGCTATTTATGCAGCTG
GTACCACAGTACTATTTCAGTAACCTGCCTCCTAGTGAAAGCAAGGACATCCTACAGCAAGCTGCAGGCC
ACCTACCCACAGAAACTGTGAACAAGGACCAGGATGTGTGTGACAAGTGCCCAGATGCTACTGAGCAGAG
ATGCACAATCCAGTGA

Translation (611 aa):
MDVNIGHEVGYVIPFENCCTTETILRYCTDDMLQREMMSNPFLGSYGVIILDDVHERSLATDVLLGLLKD
VLLARPELKLIVNCSPLLTSKLSSYYGDVPVIEVRNKHPVEVVYLSGAQKDSFESVIRLIFEIHRSGEKG
DVVVFLACEQDIEKTYELVCQEGSNLNPDVGDLVVIPLYPKEKCSLFRPVDETEKRCQVYQRRVVLTTSC
GESLIWSHTVKFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIRKQLLGSSPSGKLFCLYTEEFASKD
MRPLKPAEMQEANLTSMVLFMKRVDIAGLGRCDFMNRPAPESLMQALEDLDYLAALDNDGNLSEFGIIMS
EFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPSCFLHVPHGAEEAAVTCWKTFLHPEGDHFTLINVYN
AYQDTVLNSANEHCVEMWCHDCFLSCSALRMADVIRAELLEIIKRIELPYAEPAFGSKENGLNIKKALLS
GYFMQIARDVDGSGNYLMLTHKQVAQLHPLSSYSITKKMPEWVLFHQFSISENNYIRVASAVSPELFMQL
VPQYYFSNLPPSESKDILQQAAGHLPTETVNKDQDVCDKCPDATEQRCTIQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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