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Report for CCDS7157.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7157.1 Public Homo sapiens 10 ODAD2 24 110 108 CCDS HistoryNCBI Gene:55130Re-query CCDS DB by CCDS ID:7157.1Re-query CCDS DB by GeneID:55130See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7157.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000305242.10 ENSP00000306410.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000305242.10Link to Ensembl Protein Viewer:ENSP00000306410.5Re-query CCDS DB by Nucleotide ID:ENST00000305242Re-query CCDS DB by Protein ID:ENSP00000306410
Original member Current member EBI ENST00000673439.1 ENSP00000500782.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000673439.1Link to Ensembl Protein Viewer:ENSP00000500782.1Re-query CCDS DB by Nucleotide ID:ENST00000673439Re-query CCDS DB by Protein ID:ENSP00000500782
Original member Current member NCBI NM_001290020.2 NP_001276949.1 Accepted alive Link to Nucleotide Sequence:NM_001290020.2Link to Protein Sequence:NP_001276949.1Re-query CCDS DB by Nucleotide ID:NM_001290020Re-query CCDS DB by Protein ID:NP_001276949Link to BLAST:NP_001276949.1
Original member Current member NCBI NM_018076.5 NP_060546.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018076.5Link to Protein Sequence:NP_060546.2Re-query CCDS DB by Nucleotide ID:NM_018076Re-query CCDS DB by Protein ID:NP_060546Link to BLAST:NP_060546.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001276949.1 1044 Q5T2S8-1 1044 100% 0 0
NP_060546.2 1044 Q5T2S8-1 1044 100% 0 0

Chromosomal Locations for CCDS 7157.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 27812512 27812625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 27860625 27860846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 27862434 27862622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 27907663 27907777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 27935010 27935252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 27936726 27936880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 27939897 27940007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 27940563 27940805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 27944222 27944431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 27944816 27944962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 27961568 27961715 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 27968923 27969018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 27971108 27971313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 27981466 27981582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 27983843 27983979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 27984184 27984290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 27985019 27985211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 27987386 27987543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 27994919 27995142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3135 nt):
ATGGGTGTGGCTCTGAGGAAATTGACGCAGTGGACTGCTGCCGGACATGGAACTGGAATCCTCGAAATCA
CCCCTCTAAATGAAGCGATATTGAAAGAAATTATTGTGTTTGTGGAGAGTTTTATCTATAAACATCCTCA
AGAGGCAAAATTTGTTTTTGTGGAACCACTTGAATGGAACACAAGTTTGGCGCCCTCAGCATTTGAATCA
GGTTATGTTGTCAGTGAAACAACAGTCAAATCAGAAGAAGTTGATAAAAATGGACAGCCTTTGCTATTTC
TCTCTGTACCACAAATTAAAATTAGGAGCTTTGGGCAGCTGTCACGCTTGTTACTTATTGCCAAAACTGG
GAAGTTGAAGGAAGCCCAAGCATGTGTTGAAGCTAACAGAGACCCCATAGTAAAAATCCTGGGCTCTGAT
TATAATACAATGAAAGAAAACTCAATTGCATTAAATATTCTTGGCAAAATTACCAGAGATGATGATCCTG
AAAGTGAAATTAAGATGAAGATTGCTATGCTGCTTAAGCAATTGGATCTGCACCTCCTCAATCATTCTCT
AAAACATATTTCATTAGAAATAAGTTTAAGTCCCATGACGGTGAAGAAGGATATAGAACTGCTCAAACGT
TTCTCAGGAAAAGGAAACCAAACAGTCTTGGAATCTATTGAATATACCTCAGATTATGAATTTTCAAATG
GATGTCGAGCCCCACCGTGGAGACAAATTCGTGGGGAAATTTGTTATGTGCTGGTGAAACCTCACGATGG
TGAGACTCTGTGCATTACTTGCAGTGCAGGAGGAGTATTTTTAAATGGTGGCAAAACAGATGATGAAGGG
GACGTTAATTATGAGAGAAAAGGTTCAATTTATAAAAACCTTGTCACATTTTTAAGAGAAAAATCACCAA
AATTTTCAGAAAATATGTCTAAATTGGGAATTAGCTTCAGTGAAGACCAGCAAAAGGAAAAGGATCAGCT
TGGCAAAGCCCCCAAGAAGGAAGAAGCAGCTGCCCTCCGCAAAGACATTTCTGGTTCAGACAAAAGGTCA
CTGGAGAAGAACCAAATTAATTTTTGGAGGAATCAAATGACCAAGAGATGGGAACCAAGCTTAAACTGGA
AGACCACTGTTAATTACAAAGGCAAAGGCTCAGCAAAAGAAATCCAAGAGGACAAACACACAGGAAAACT
TGAAAAACCAAGACCATCTGTTTCACACGGAAGAGCACAATTACTTCGGAAGAGTGCTGAAAAGATTGAG
GAAACTGTTAGCGATAGCTCCTCAGAAAGTGAGGAAGATGAAGAACCACCTGACCATCGTCAGGAAGCAA
GTGCAGATTTGCCATCAGAATATTGGCAAATTCAGAAGCTGGTGAAATATTTAAAGGGAGGAAATCAAAC
AGCTACAGTGATTGCGTTGTGTTCAATGAGGGATTTCAGCTTAGCTCAAGAAACCTGCCAGTTGGCCATC
AGAGATGTTGGAGGCCTGGAAGTGCTGATAAATTTGCTTGAAACCGATGAAGTCAAATGTAAGATTGGTT
CATTAAAAATACTGAAGGAAATCAGTCATAATCCTCAAATCAGACAGAATATTGTTGACCTTGGGGGCTT
ACCAATTATGGTGAATATACTTGATTCTCCACACAAGAGTCTAAAATGTTTGGCAGCCGAGACTATCGCG
AATGTTGCCAAGTTTAAAAGAGCACGGCGGGTGGTGAGGCAGCACGGGGGTATCACCAAACTGGTTGCTC
TACTAGACTGTGCACATGATTCCACAAAACCTGCCCAATCGAGTCTGTATGAGGCCAGAGACGTGGAAGT
GGCTCGCTGTGGGGCACTGGCCCTGTGGAGCTGCAGTAAGAGTCATACGAATAAAGAAGCCATCCGCAAA
GCTGGGGGCATTCCTCTGTTGGCTCGGCTGCTGAAGACTTCTCATGAAAACATGCTAATTCCAGTGGTGG
GGACATTGCAAGAGTGTGCATCAGAGGAAAACTACCGGGCTGCAATCAAAGCAGAAAGGATCATTGAAAA
CCTTGTCAAGAACCTAAATAGTGAGAATGAGCAGCTGCAGGAGCACTGCGCCATGGCCATTTACCAGTGT
GCTGAAGATAAGGAAACCCGGGACCTCGTTAGGCTGCACGGAGGACTTAAGCCCTTGGCCAGTCTACTCA
ATAACACTGACAATAAAGAGCGGTTAGCTGCTGTCACAGGGGCTATATGGAAATGTTCCATCAGCAAAGA
GAATGTTACCAAGTTTCGGGAATACAAAGCCATTGAAACCTTGGTGGGACTTCTAACAGATCAGCCTGAA
GAAGTACTTGTGAATGTGGTTGGGGCCTTGGGAGAATGCTGCCAAGAACGTGAAAACCGAGTCATTGTCC
GGAAATGTGGTGGCATTCAACCACTTGTGAACCTCCTTGTTGGAATAAACCAAGCTCTTCTTGTGAATGT
TACAAAAGCAGTTGGTGCTTGTGCAGTAGAACCTGAAAGTATGATGATAATTGATCGCTTAGATGGAGTT
CGTTTGTTGTGGTCCCTGCTGAAAAATCCTCACCCAGACGTGAAGGCCAGCGCAGCATGGGCACTCTGTC
CATGCATCAAAAATGCAAAGGATGCTGGGGAAATGGTTCGTTCCTTTGTTGGTGGTTTGGAACTTATTGT
CAATTTACTGAAATCAGATAACAAAGAAGTTCTGGCAAGTGTATGTGCTGCCATTACCAACATAGCAAAA
GATCAAGAAAATTTAGCTGTTATCACAGATCATGGAGTTGTTCCTTTATTGTCCAAACTGGCAAATACAA
ATAACAATAAATTGAGACATCATCTAGCAGAAGCTATTTCACGTTGCTGTATGTGGGGCAGGAATAGAGT
GGCCTTCGGTGAGCACAAAGCAGTGGCTCCACTAGTGCGTTATCTGAAATCAAATGACACCAACGTGCAT
CGGGCGACAGCTCAGGCCTTGTACCAACTCTCAGAAGACGCCGATAACTGCATCACCATGCATGAGAATG
GTGCAGTAAAGCTTCTACTGGATATGGTTGGGTCCCCTGACCAGGATCTCCAGGAAGCTGCAGCTGGTTG
TATATCCAATATCCGCAGGCTGGCTCTTGCTACAGAGAAGGCAAGATACACTTGA

Translation (1044 aa):
MGVALRKLTQWTAAGHGTGILEITPLNEAILKEIIVFVESFIYKHPQEAKFVFVEPLEWNTSLAPSAFES
GYVVSETTVKSEEVDKNGQPLLFLSVPQIKIRSFGQLSRLLLIAKTGKLKEAQACVEANRDPIVKILGSD
YNTMKENSIALNILGKITRDDDPESEIKMKIAMLLKQLDLHLLNHSLKHISLEISLSPMTVKKDIELLKR
FSGKGNQTVLESIEYTSDYEFSNGCRAPPWRQIRGEICYVLVKPHDGETLCITCSAGGVFLNGGKTDDEG
DVNYERKGSIYKNLVTFLREKSPKFSENMSKLGISFSEDQQKEKDQLGKAPKKEEAAALRKDISGSDKRS
LEKNQINFWRNQMTKRWEPSLNWKTTVNYKGKGSAKEIQEDKHTGKLEKPRPSVSHGRAQLLRKSAEKIE
ETVSDSSSESEEDEEPPDHRQEASADLPSEYWQIQKLVKYLKGGNQTATVIALCSMRDFSLAQETCQLAI
RDVGGLEVLINLLETDEVKCKIGSLKILKEISHNPQIRQNIVDLGGLPIMVNILDSPHKSLKCLAAETIA
NVAKFKRARRVVRQHGGITKLVALLDCAHDSTKPAQSSLYEARDVEVARCGALALWSCSKSHTNKEAIRK
AGGIPLLARLLKTSHENMLIPVVGTLQECASEENYRAAIKAERIIENLVKNLNSENEQLQEHCAMAIYQC
AEDKETRDLVRLHGGLKPLASLLNNTDNKERLAAVTGAIWKCSISKENVTKFREYKAIETLVGLLTDQPE
EVLVNVVGALGECCQERENRVIVRKCGGIQPLVNLLVGINQALLVNVTKAVGACAVEPESMMIIDRLDGV
RLLWSLLKNPHPDVKASAAWALCPCIKNAKDAGEMVRSFVGGLELIVNLLKSDNKEVLASVCAAITNIAK
DQENLAVITDHGVVPLLSKLANTNNNKLRHHLAEAISRCCMWGRNRVAFGEHKAVAPLVRYLKSNDTNVH
RATAQALYQLSEDADNCITMHENGAVKLLLDMVGSPDQDLQEAAAGCISNIRRLALATEKARYT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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