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Report for CCDS70849.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
70849.1 Public Mus musculus 17 Abcg8 23 108 98 CCDS HistoryNCBI Gene:67470Re-query CCDS DB by CCDS ID:70849.1Re-query CCDS DB by GeneID:67470See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 70849.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000170725.7 ENSMUSP00000127785.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000170725.7Link to Ensembl Protein Viewer:ENSMUSP00000127785.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000170725Re-query CCDS DB by Protein ID:ENSMUSP00000127785
Original member Current member NCBI NM_001286005.1 NP_001272934.1 Accepted alive Link to Nucleotide Sequence:NM_001286005.1Link to Protein Sequence:NP_001272934.1Re-query CCDS DB by Nucleotide ID:NM_001286005Re-query CCDS DB by Protein ID:NP_001272934Link to BLAST:NP_001272934.1

Chromosomal Locations for CCDS 70849.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 84691856 84692038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 84692484 84692616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 84692711 84692980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 84694992 84695154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 84695242 84695322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 84695952 84696151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 84696674 84696750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 84697295 84697562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 84698449 84698576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 84698662 84698799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1641 nt):
ATGAAATCAGGACAAATTTGGATAAATGGGCAACCCAGTACGCCTCAGCTGGTGAGGAAGTGCGTTGCGC
ATGTGCGGCAGCATGACCAACTGCTGCCCAACCTGACCGTCAGAGAGACCCTGGCTTTCATTGCCCAGAT
GCGCCTGCCCAGGACCTTCTCCCAGGCCCAGCGTGACAAACGGGTGGAAGACGTAATCGCCGAGCTGCGG
CTGCGGCAGTGCGCCAACACCAGAGTGGGCAACACGTATGTACGTGGGGTGTCCGGGGGTGAGCGCCGAC
GAGTGAGCATTGGGGTGCAGCTCCTGTGGAACCCAGGAATCCTCATTCTGGATGAACCCACTTCTGGCCT
CGACAGCTTCACAGCCCACAATCTGGTGACAACCTTGTCCCGCCTGGCCAAGGGCAACAGGCTGGTGCTC
ATCTCCCTCCACCAGCCTCGCTCTGACATCTTCAGGCTATTTGACCTGGTCCTTCTGATGACATCTGGCA
CCCCTATCTACCTGGGGGCGGCGCAGCAAATGGTGCAGTACTTCACATCCATTGGCCACCCTTGTCCTCG
CTATAGCAACCCTGCGGACTTCTACGTGGACTTGACCAGCATCGACAGACGCAGCAAAGAACGGGAGGTG
GCCACCGTGGAGAAGGCACAGTCTCTTGCAGCCCTGTTCCTAGAAAAAGTACAAGGCTTTGATGACTTTC
TGTGGAAAGCTGAGGCAAAGGAACTCAACACAAGCACCCACACAGTCAGCCTGACCCTCACACAGGACAC
TGACTGTGGGACTGCTGTTGAGCTGCCCGGGATGATAGAGCAGTTTTCCACCCTGATCCGTCGTCAGATT
TCCAATGACTTCCGGGACCTGCCCACGCTGCTCATTCATGGGTCGGAAGCCTGCCTGATGTCCCTCATCA
TTGGCTTCCTTTACTACGGCCATGGGGCCAAGCAGCTCTCCTTCATGGACACAGCAGCCCTCCTCTTCAT
GATAGGGGCGCTCATTCCTTTCAATGTCATCCTGGATGTCGTCTCCAAATGTCACTCGGAGAGGTCAATG
CTGTACTATGAGCTGGAAGACGGGCTGTACACTGCTGGTCCTTATTTCTTTGCCAAGATCCTAGGAGAAT
TGCCGGAGCACTGTGCCTACGTCATCATCTACGCGATGCCCATCTACTGGCTGACAAACCTGCGGCCCGT
GCCTGAGCTCTTCCTTCTACACTTCCTGCTCGTGTGGTTGGTGGTCTTCTGCTGCAGGACCATGGCCCTG
GCTGCCTCTGCCATGCTGCCCACCTTCCACATGTCCTCCTTCTTCTGCAATGCCCTCTACAACTCCTTCT
ACCTTACTGCCGGCTTCATGATAAACTTGGACAACCTGTGGATAGTGCCTGCATGGATCTCCAAGCTGTC
GTTCCTCCGGTGGTGCTTCTCGGGGCTGATGCAGATTCAATTTAATGGACACCTTTACACCACACAAATC
GGCAACTTCACCTTCTCCATCCTCGGAGACACGATGATCAGTGCCATGGACCTGAACTCGCATCCACTCT
ATGCGATCTACCTCATTGTCATCGGCATCAGCTACGGCTTCCTGTTCCTGTACTATCTATCCTTGAAGCT
CATCAAACAGAAGTCAATTCAAGACTGGTGA

Translation (546 aa):
MKSGQIWINGQPSTPQLVRKCVAHVRQHDQLLPNLTVRETLAFIAQMRLPRTFSQAQRDKRVEDVIAELR
LRQCANTRVGNTYVRGVSGGERRRVSIGVQLLWNPGILILDEPTSGLDSFTAHNLVTTLSRLAKGNRLVL
ISLHQPRSDIFRLFDLVLLMTSGTPIYLGAAQQMVQYFTSIGHPCPRYSNPADFYVDLTSIDRRSKEREV
ATVEKAQSLAALFLEKVQGFDDFLWKAEAKELNTSTHTVSLTLTQDTDCGTAVELPGMIEQFSTLIRRQI
SNDFRDLPTLLIHGSEACLMSLIIGFLYYGHGAKQLSFMDTAALLFMIGALIPFNVILDVVSKCHSERSM
LYYELEDGLYTAGPYFFAKILGELPEHCAYVIIYAMPIYWLTNLRPVPELFLLHFLLVWLVVFCCRTMAL
AASAMLPTFHMSSFFCNALYNSFYLTAGFMINLDNLWIVPAWISKLSFLRWCFSGLMQIQFNGHLYTTQI
GNFTFSILGDTMISAMDLNSHPLYAIYLIVIGISYGFLFLYYLSLKLIKQKSIQDW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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