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Report for CCDS69888.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
69888.1 Public Mus musculus 1 Asnsd1 23 108 98 CCDS HistoryNCBI Gene:70396Re-query CCDS DB by CCDS ID:69888.1Re-query CCDS DB by GeneID:70396See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 69888.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000123519.8 ENSMUSP00000139025.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000123519.8Link to Ensembl Protein Viewer:ENSMUSP00000139025.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000123519Re-query CCDS DB by Protein ID:ENSMUSP00000139025
Original member Current member NCBI NM_001290984.1 NP_001277913.1 Accepted alive Link to Nucleotide Sequence:NM_001290984.1Link to Protein Sequence:NP_001277913.1Re-query CCDS DB by Nucleotide ID:NM_001290984Re-query CCDS DB by Protein ID:NP_001277913Link to BLAST:NP_001277913.1

Chromosomal Locations for CCDS 69888.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 53344730 53344979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 53346580 53346761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 53348446 53348466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (453 nt):
ATGTGTGGCATTTGCTGTTCTGTGATTCTTACTGGGATTGGTGCAGATGAGCAGTTGGCAGGTTATTCCC
GTCATCGTGCCCGCTTTCAGTCTCTTGGCCTAGAAGGACTGAACGAGGAAATAGCAATGGAATTGGGTCG
CATTTCTTCTAGAAACCTTGGTCGTGATGACAGAGTTATTGGTGATCATGGAAAGGAAGCAAGATTTCCT
TTCCTGGATGAAAATGTTGTGTCTTTCCTAAATTCTCTGCCAGTTTGGGAAAAGGTAGACCTCACTCTGC
CCCGTGGAGTTGGTGAGAAGCTTATTTTACGCCTTGCAGCTATGGAACTTGGTCTCCCAGCCTCTGCCCT
TCTGCCAAAACGAGCCATACAATTTGGATCTAGAATTGCAAAACTGGAAAAATCTAATGAGAAGGCATCT
GATAAGTGTGGAAGGCTCCAAATCCTACCTTAG

Translation (150 aa):
MCGICCSVILTGIGADEQLAGYSRHRARFQSLGLEGLNEEIAMELGRISSRNLGRDDRVIGDHGKEARFP
FLDENVVSFLNSLPVWEKVDLTLPRGVGEKLILRLAAMELGLPASALLPKRAIQFGSRIAKLEKSNEKAS
DKCGRLQILP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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