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Report for CCDS6792.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6792.1 Public Homo sapiens 9 WDR31 24 110 108 CCDS HistoryNCBI Gene:114987Re-query CCDS DB by CCDS ID:6792.1Re-query CCDS DB by GeneID:114987See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6792.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000341761.8 ENSP00000345027.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000341761.8Link to Ensembl Protein Viewer:ENSP00000345027.3Re-query CCDS DB by Nucleotide ID:ENST00000341761Re-query CCDS DB by Protein ID:ENSP00000345027
Original member Current member EBI ENST00000374195.7 ENSP00000363310.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000374195.7Link to Ensembl Protein Viewer:ENSP00000363310.4Re-query CCDS DB by Nucleotide ID:ENST00000374195Re-query CCDS DB by Protein ID:ENSP00000363310
Original member Current member NCBI NM_145241.5 NP_660284.1 Accepted alive Link to Nucleotide Sequence:NM_145241.5Link to Protein Sequence:NP_660284.1Re-query CCDS DB by Nucleotide ID:NM_145241Re-query CCDS DB by Protein ID:NP_660284Link to BLAST:NP_660284.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_660284.1 366 Q8NA23-2 366 100% 0 0

Chromosomal Locations for CCDS 6792.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 113316749 113316909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 113318475 113318637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 113320357 113320498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 113321511 113321578 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 113322811 113322911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 113323011 113323155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 113328881 113328955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 113330984 113331113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 113331907 113332022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1101 nt):
ATGCTGCTACTCAGGTGCCAACTGAAACAAGCTCCTCCACAGAAGGTTTCGTTTAGGTTTTGTGTCGTGA
TGGGGAAACAGCAAAGCAAACTCAAACACAGCACTTATAAATACGGGCCTGATGAAATTATAGAAGAGAG
AATTCAAACTAAAGCTTTTCAAGAGTATAGCCCAGCTCACATGGATACCGTCTCTGTCGTGGCTGCTTTG
AACTCAGACCTTTGTGTCTCTGGAGGGAAAGATAAGACAGTTGTGGCCTATAATTGGAAAACTGGAAATG
TGGTGAAAAGGTTCAAAGGACATGAACATGAGATCACCAAGGTAGCCTGTATTCCCAAATCCAGCCAGTT
CTTCAGTGCCTCTCGTGACAGGATGGTCATGATGTGGGACTTGCACGGTTCCTCACAACCAAGGCAGCAA
TTGTGTGGCCATGCCATGGTGGTCACCGGATTGGCTGTGAGTCCAGACTCATCACAGCTGTGCACTGGCT
CTCGGGACAACACCCTGCTTCTGTGGGATGTGGTGACAGGACAGAGTGTGGAAAGAGCATCTGTCTCCAG
GAACGTGGTCACTCACCTGTGCTGGGTCCCCAGAGAACCATACATACTACAGACCTCTGAAGATAAAACC
CTCAGATTATGGGACAGTCGGGGGCTGCAGGTAGCTCATATGTTTCCTGCAAAGCAGCACATTCAGACCT
ACTGTGAAGTCAGTGTGGATGGACACAAGTGTATCTCCTGCAGCAATGGCTTTGGAGGAGAAGGCTGTGA
AGCCACGTTGTGGGACCTAAGACAGACTCGAAACAGAATATGTGAGTATAAGGGGCATTTCCAGACTGTC
GCATCCTGCGTCTTTCTACCAAGAGCATTGGCCTTGATGCCTTTAATTGCTACCTCATCACATGATTGCA
AGGTGAAGATTTGGAACCAAGATACTGGAGCCTGCCTTTTCACCTTGTCTCTGGATGGATCAGGACCCTT
GACTTCTCTGGCTGTTGGTGACGCCATCTCCTTATTGTGTGCAAGTTTTAACAGAGGAATTCACTTACTC
AGAATGGACCACAGCCAAGGGCTGGAACTGCAGGAAGTGGCAGCATTCTGA

Translation (366 aa):
MLLLRCQLKQAPPQKVSFRFCVVMGKQQSKLKHSTYKYGPDEIIEERIQTKAFQEYSPAHMDTVSVVAAL
NSDLCVSGGKDKTVVAYNWKTGNVVKRFKGHEHEITKVACIPKSSQFFSASRDRMVMMWDLHGSSQPRQQ
LCGHAMVVTGLAVSPDSSQLCTGSRDNTLLLWDVVTGQSVERASVSRNVVTHLCWVPREPYILQTSEDKT
LRLWDSRGLQVAHMFPAKQHIQTYCEVSVDGHKCISCSNGFGGEGCEATLWDLRQTRNRICEYKGHFQTV
ASCVFLPRALALMPLIATSSHDCKVKIWNQDTGACLFTLSLDGSGPLTSLAVGDAISLLCASFNRGIHLL
RMDHSQGLELQEVAAF


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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