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Report for CCDS59646.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59646.1 Public Mus musculus 3 Npy2r 23 108 98 CCDS HistoryNCBI Gene:18167Re-query CCDS DB by CCDS ID:59646.1Re-query CCDS DB by GeneID:18167See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 13, NCBI annotation release 103, Ensembl annotation release 72

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59646.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000029633.4 ENSMUSP00000029633.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000029633.4Link to Ensembl Protein Viewer:ENSMUSP00000029633.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000029633Re-query CCDS DB by Protein ID:ENSMUSP00000029633
Original member Current member EBI ENSMUST00000098997.4 ENSMUSP00000096595.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098997.4Link to Ensembl Protein Viewer:ENSMUSP00000096595.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000098997Re-query CCDS DB by Protein ID:ENSMUSP00000096595
Original member Current member EBI ENSMUST00000182831.1 ENSMUSP00000138282.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000182831.1Link to Ensembl Protein Viewer:ENSMUSP00000138282.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000182831Re-query CCDS DB by Protein ID:ENSMUSP00000138282
Original member NCBI NM_008731.3 NP_032757.2 Updated not alive Link to Nucleotide Sequence:NM_008731.3Link to Protein Sequence:NP_032757.2Re-query CCDS DB by Nucleotide ID:NM_008731Re-query CCDS DB by Protein ID:NP_032757
Current member NCBI NM_008731.4 NP_032757.2 Accepted alive Link to Nucleotide Sequence:NM_008731.4Link to Protein Sequence:NP_032757.2Re-query CCDS DB by Nucleotide ID:NM_008731Re-query CCDS DB by Protein ID:NP_032757Link to BLAST:NP_032757.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032757.2 381 P97295 381 100% 0 0

Chromosomal Locations for CCDS 59646.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 82540321 82541466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1146 nt):
ATGGGCCCGGTAGGTGCAGAGGCAGATGAGAATCAAACTGTAGAAGTGAAAGTGGAGCCCTATGGGCCAG
GGCACACTACTCCTAGAGGTGAGTTGCCCCCTGATCCGGAGCCGGAGCTCATAGACAGCACCAAACTGGT
CGAGGTGCAGGTGATCCTCATATTGGCCTACTGCTCCATCATCTTGCTAGGGGTAGTTGGCAACTCCCTG
GTAATCCATGTGGTAATCAAATTCAAGAGCATGCGCACAGTAACCAACTTTTTTATTGCCAACCTGGCTG
TGGCGGATCTTTTGGTGAACACCCTGTGCCTGCCATTCACTCTTACCTATACCTTGATGGGAGAGTGGAA
AATGGGTCCGGTCTTGTGCCATTTGGTGCCCTATGCCCAGGGTCTGGCGGTACAAGTGTCCACAATAACT
TTGACAGTCATTGCTCTGGACCGCCATCGTTGCATTGTCTACCACCTGGAGAGCAAGATCTCCAAGCGAA
TCAGCTTCCTGATCATTGGCCTGGCCTGGGGCATCAGCGCTCTGCTGGCAAGTCCACTGGCCATCTTCCG
GGAATACTCCCTGATTGAGATCATTCCTGACTTTGAGATTGTGGCCTGTACCGAGAAGTGGCCTGGGGAA
GAGAAGAGTGTGTATGGTACAGTCTACAGCCTTTCCACCCTGCTCATCCTGTACGTTTTGCCTCTGGGCA
TCATATCTTTCTCCTACACCCGTATCTGGAGTAAGCTGAGGAACCACGTCAGTCCTGGAGCTGCAAGTGA
CCATTACCATCAGCGAAGGCACAAAATGACCAAAATGCTGGTGTGCGTGGTAGTGGTGTTTGCAGTCAGC
TGGCTACCCCTCCACGCCTTCCAACTCGCTGTGGACATCGACAGCCACGTCCTGGACCTGAAGGAGTACA
AACTCATCTTCACCGTGTTCCACATTATCGCCATGTGCTCCACCTTTGCCAACCCCCTTCTCTATGGTTG
GATGAATAGCAACTACAGAAAAGCTTTCCTCTCGGCCTTCCGCTGTGAGCAGAGGTTGGATGCCATTCAC
TCGGAGGTGTCTATGACCTTCAAGGCTAAAAAGAACCTGGAAGTCAAAAAGAACAATGGCCCCACTGACT
CTTTTTCGGAGGCTACCAATGTGTAA

Translation (381 aa):
MGPVGAEADENQTVEVKVEPYGPGHTTPRGELPPDPEPELIDSTKLVEVQVILILAYCSIILLGVVGNSL
VIHVVIKFKSMRTVTNFFIANLAVADLLVNTLCLPFTLTYTLMGEWKMGPVLCHLVPYAQGLAVQVSTIT
LTVIALDRHRCIVYHLESKISKRISFLIIGLAWGISALLASPLAIFREYSLIEIIPDFEIVACTEKWPGE
EKSVYGTVYSLSTLLILYVLPLGIISFSYTRIWSKLRNHVSPGAASDHYHQRRHKMTKMLVCVVVVFAVS
WLPLHAFQLAVDIDSHVLDLKEYKLIFTVFHIIAMCSTFANPLLYGWMNSNYRKAFLSAFRCEQRLDAIH
SEVSMTFKAKKNLEVKKNNGPTDSFSEATNV


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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