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Report for CCDS58063.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58063.1 Public Homo sapiens 1 NVL 24 110 108 CCDS HistoryNCBI Gene:4931Re-query CCDS DB by CCDS ID:58063.1Re-query CCDS DB by GeneID:4931See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58063.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000469075.5 ENSP00000417826.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000469075.5Link to Ensembl Protein Viewer:ENSP00000417826.1Re-query CCDS DB by Nucleotide ID:ENST00000469075Re-query CCDS DB by Protein ID:ENSP00000417826
Original member Current member NCBI NM_001243147.2 NP_001230076.1 Accepted alive Link to Nucleotide Sequence:NM_001243147.2Link to Protein Sequence:NP_001230076.1Re-query CCDS DB by Nucleotide ID:NM_001243147Re-query CCDS DB by Protein ID:NP_001230076Link to BLAST:NP_001230076.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001230076.1 765 O15381-5 765 100% 0 0

Chromosomal Locations for CCDS 58063.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 224227626 224227670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224231226 224231296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224233201 224233289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224236506 224236582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224250212 224250318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224268034 224268133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224275339 224275458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224281123 224281185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224286026 224286130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224287775 224287993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224289484 224289733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224294267 224294411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224296501 224296618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224300562 224300663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224303723 224303857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224304736 224304812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224305034 224305166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224311800 224311857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224317694 224317793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224317878 224317930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224326391 224326464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224330071 224330127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2298 nt):
ATGAAGCCCAGACCTGCAGGGTTCGTGGATAATAAACTCAAGCAGCGAGTCATCCAGTACCTTACCAGTA
ACAAATGTGGCAAATATGTGGACATTGGAGTCTTAGCGTCTGATTTACAAAGAGTGTACAGTATAGACTA
TGGTCGAAGAAAAAGAAATGCTTTTAGGATTCAGGTAGAAAAAGTATTTAGCATAATTAGTAGTGAGAAG
GAACTTAAGAATTTAACAGAATTAGAAGATGAACATTTGGCAAAAAGGGCAAGACAAGGTGAAGAGGATA
ATGAGTATACTGAAAGCTATTCTGATGATGATTCAAGTATGGAAGACTACCCAGATCCACAGGATTCAAA
AGATTCTTCTCTTTTGGAGAGTGATATGAAACGGAAAGGCAAGCTAAAGAATAAAGGAAGCAAAAGGAAG
AAAGAAGATCTTCAGGAAGTAGATGGAGAAATTGAAGCTGTCCTGCAAAAGAAAGCTAAAGCCAGGGGGT
TAGAATTCCAGATCTCCAACGTGAAGTTTGAAGATGTGGGAGGCAATGATATGACATTAAAAGAGGTCTG
CAAGATGCTCATACACATGCGTCACCCGGAGGTGTACCACCACCTGGGCGTCGTGCCCCCTCGTGGAGTT
CTCCTTCATGGACCACCAGGCTGTGGGAAGACATTACTTGCACATGCAATTGCTGGGGAACTTGACCTGC
CAATTTTGAAAGTGGCTGCTCCAGAGATTGTGTCTGGAGTATCCGGAGAGTCTGAGCAGAAGCTGAGAGA
ACTATTTGAGCAAGCTGTGTCAAATGCACCATGTATCATTTTCATTGATGAAATTGATGCTATTACCCCC
AAAAGAGAAGTGGCTTCAAAAGATATGGAACGAAGAATTGTAGCCCAACTCCTAACCTGCATGGATGATC
TGAATAATGTGGCTGCTACAGCCCGGGTCCTAGTTATTGGAGCTACTAATCGACCAGACTCGTTAGACCC
TGCTTTGAGACGTGCGGGAAGGTTCGACCGAGAAATATGCCTAGGTATCCCAGATGAAGCATCCAGGGAA
AGAATACTTCAAACATTGTGCAGAAAACTGAGGCTTCCTCAAGCTTTTGATTTCTGTCACTTAGCACACC
TAACTCCAGGCTTTGTTGGTGCTGATCTCATGGCACTGTGCCGAGAGGCAGCAATGTGTGCAGTCAATAG
AGTCTTAATGAAGCTACAGGAACAGCAGAAGAAAAATCCTGAAATGGAAGATTTGCCATCTAAAGGAGTC
CAGGAGGAAAGGCTGGGAACTGAGCCCACTTCTGAAACACAGGATGAATTACAAAGGCTGCTGGGGTTGC
TAAGAGACCAAGATCCCCTCTCAGAGGAGCAGATGCAAGGACTGTGCATTGAACTGAATGATTTCATTGT
TGCTCTATCCTCAGTCCAACCCTCTGCCAAAAGGGAAGGCTTTGTCACTGTCCCTAATGTGACATGGGCA
GATATTGGTGCCCTGGAAGACATTAGAGAGGAGCTCACCATGGCAATATTGGCACCAGTACGCAACCCAG
ACCAGTTCAAAGCTCTTGGATTGGTGACTCCAGCTGGGGTCCTCCTTGCTGGTCCTCCTGGCTGTGGGAA
GACTCTGCTGGCGAAGGCTGTTGCAAATGAGTCCGGACTAAATTTTATATCTGTCAAGGGCCCCGAATTA
CTAAACATGTATGTTGGTGAGAGTGAACGTGCTGTGCGACAAGTTTTTCAACGAGCCAAGAACTCAGCAC
CCTGTGTGATATTCTTTGATGAAGTGGATGCTTTATGTCCTCGAAGATCAGACCGAGAGACAGGGGCAAG
TGTCCGAGTGGTGAATCAGCTACTTACAGAGATGGATGGTCTGGAAGCACGCCAGCAGGTTTTTATTATG
GCAGCCACTAACAGGCCAGATATAATTGACCCTGCAATCCTGCGCCCGGGCCGCCTGGACAAAACACTGT
TTGTGGGTTTACCGCCCCCTGCAGATCGCCTTGCCATCTTAAAAACTATCACAAAAAATGGTACCAAACC
ACCACTGGATGCAGATGTAAATTTGGAAGCAATTGCTGGTGACCTTCGCTGTGATTGCTATACGGGCGCA
GATCTCTCTGCTTTGGTACGAGAAGCTTCTATCTGTGCCCTGAGACAGGAAATGGCAAGACAGAAGAGTG
GAAATGAAAAAGGTGAACTCAAGGTTAGTCATAAGCATTTTGAAGAAGCTTTCAAGAAAGTAAGATCATC
TATATCAAAAAAGGATCAAATCATGTATGAACGTTTGCAGGAGTCCCTCAGCCGGTGA

Translation (765 aa):
MKPRPAGFVDNKLKQRVIQYLTSNKCGKYVDIGVLASDLQRVYSIDYGRRKRNAFRIQVEKVFSIISSEK
ELKNLTELEDEHLAKRARQGEEDNEYTESYSDDDSSMEDYPDPQDSKDSSLLESDMKRKGKLKNKGSKRK
KEDLQEVDGEIEAVLQKKAKARGLEFQISNVKFEDVGGNDMTLKEVCKMLIHMRHPEVYHHLGVVPPRGV
LLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITP
KREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRE
RILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQKKNPEMEDLPSKGV
QEERLGTEPTSETQDELQRLLGLLRDQDPLSEEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWA
DIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPEL
LNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIM
AATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGA
DLSALVREASICALRQEMARQKSGNEKGELKVSHKHFEEAFKKVRSSISKKDQIMYERLQESLSR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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