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Report for CCDS56696.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56696.1 Public Mus musculus 10 E030030I06Rik 23 108 98 CCDS HistoryNCBI Gene:319887Re-query CCDS DB by CCDS ID:56696.1Re-query CCDS DB by GeneID:319887See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 56696.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000179054.7 ENSMUSP00000136352.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000179054.7Link to Ensembl Protein Viewer:ENSMUSP00000136352.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000179054Re-query CCDS DB by Protein ID:ENSMUSP00000136352
Original member Current member NCBI NM_001254744.1 NP_001241673.1 Accepted alive Link to Nucleotide Sequence:NM_001254744.1Link to Protein Sequence:NP_001241673.1Re-query CCDS DB by Nucleotide ID:NM_001254744Re-query CCDS DB by Protein ID:NP_001241673Link to BLAST:NP_001241673.1

Chromosomal Locations for CCDS 56696.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 22114132 22114348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 22148489 22149012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (741 nt):
ATGAGGGGAGCTGGTGGAACCCGATGGAAGTCTCCCGGGCAGTCTGATCACACTTTCTCCTTGTCCTCCG
GTCTCCTCCTCCTAGGTGCAGAGATTGTGGGCAGACTACGTAATCGCTGCGGAGGGGGAAGAGGAGGGAT
CTCCGGCGGCGGCGGCAGGGCGCGGAGACTCAGCTGGGCGGAGTTTCGCGGCTGCGCCCGGCTTGCGCCC
GCGGGCGAGAAGGTCGGTCCGTCTAGCCCGGGGGCCCCCGAGGCGTGTAAGTCAGAGAGTACGCACCCCG
GTTCCTCTGTGCCGCACCGACAGCCTGCAGCCAGCAAGGAGAAGGACAGCCTGGGTGGCGCCGATCAGAG
TACGAGTGCTTGGCAGAGATCGGCGAAGGCCCCCGACCTGAAGAATGGCGGCCGCTTCCTGATTCCGAAG
CGCCAGCGAGTACAGACCAGTGAGGAGGACTTGCGGCTCTCCACCGTCCGTGAGGTGGCGGTGCTGAGGC
ACCTGGAGACCTTAGAGCAACCCTACGTGGTCAGAGCATTCATATTGGTTAATTCTTGCGCGCACTGGAC
TCGACCAGCAAGAACGACGCTGCAACAGGATCCTTCTGCACACGTTTATTGGGAGAGCTTGATTGCAGAG
GCGAAAAGACCCCGAGCCCAGAACTGGTGCTGCTTTTATAGGCCTAGGAGAGGCGTGTCTCACACCTGGA
TTGGTTATGCACTACGCCTCATTTGCATGTTCCTCATCTGA

Translation (246 aa):
MRGAGGTRWKSPGQSDHTFSLSSGLLLLGAEIVGRLRNRCGGGRGGISGGGGRARRLSWAEFRGCARLAP
AGEKVGPSSPGAPEACKSESTHPGSSVPHRQPAASKEKDSLGGADQSTSAWQRSAKAPDLKNGGRFLIPK
RQRVQTSEEDLRLSTVREVAVLRHLETLEQPYVVRAFILVNSCAHWTRPARTTLQQDPSAHVYWESLIAE
AKRPRAQNWCCFYRPRRGVSHTWIGYALRLICMFLI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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