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Report for CCDS54802.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54802.1 Public Homo sapiens 4 ANKRD50 24 110 108 CCDS HistoryNCBI Gene:57182Re-query CCDS DB by CCDS ID:54802.1Re-query CCDS DB by GeneID:57182See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54802.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000515641.1 ENSP00000425355.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000515641.1Link to Ensembl Protein Viewer:ENSP00000425355.1Re-query CCDS DB by Nucleotide ID:ENST00000515641Re-query CCDS DB by Protein ID:ENSP00000425355
Original member Current member NCBI NM_001167882.2 NP_001161354.1 Accepted alive Link to Nucleotide Sequence:NM_001167882.2Link to Protein Sequence:NP_001161354.1Re-query CCDS DB by Nucleotide ID:NM_001167882Re-query CCDS DB by Protein ID:NP_001161354Link to BLAST:NP_001161354.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001161354.1 1250 Q9ULJ7-2 1250 100% 0 0

Chromosomal Locations for CCDS 54802.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 124668987 124672534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 124678676 124678880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3753 nt):
ATGAAGCCTCCCCAGCAAAGCCTATACCTGCTTGTTGATTCTGTTGATGAAGGGTGTAACATTACTGAAG
GTGAACAAACGTCTACCAGCTTATCTGGGACTGTTGCAGCACTTTTAGCTGGTCACCATGAGTTCTTTCC
ACCATGGCTATTGCTTCTCTGTTCTGCCCGAAAGCAGAGTAAGGCTGTTACTAAAATGTTTACTGGTTTT
CGAAAAATAAGTTTAGATGACCTTCGGAAGGCATATATCGTCAAGGATGTTCAGCAGTACATTCTTCATC
GTTTAGATCAAGAAGAAGCTTTGCGACAACACCTCACAAAAGAAACTGCAGAGATGTTAAATCAACTGCA
CATTAAAAGCAGTGGATGCTTTCTTTACCTAGAACGAGTTTTAGATGGAGTTGTAGAAAATTTTATTATG
TTAAGAGAAATTCGTGACATCCCAGGAACTCTAAATGGTTTATATCTCTGGCTGTGCCAAAGACTTTTTG
TAAGAAAACAATTTGCAAAGGTTCAGCCTATTTTGAATGTGATTCTTGCAGCCTGCCGACCTTTGACCAT
AACGGAATTATATCACGCAGTATGGACCAAAAACATGTCGTTAACTTTGGAAGATTTTCAACGCAAGTTA
GATATCCTCTCCAAACTTCTTGTTGATGGACTAGGAAATACAAAAATACTGTTTCATTATAGTTTTGCCG
AGTGGCTTCTGGATGTGAAACACTGTACTCAGAAGTATTTATGTAATGCAGCAGAAGGACACAGAATGTT
GGCTATGAGTTATACCTGTCAAGCCAAGAATTTAACACCATTGGAAGCACAAGAATTTGCATTGCACTTA
ATTAACTCAAACTTACAATTAGAGACAGCGGAGTTAGCTCTGTGGATGATATGGAATGGTACACCTGTCA
GAGATTCCCTTTCTACTTTGATACCCAAGGAACAAGAAGTGCTACAGCTGTTGGTTAAAGCTGGGGCTCA
TGTCAACAGTGAAGACGATCGCACATCATGCATAGTTCGACAAGCCTTAGAAAGAGAGGATTCCATTCGG
ACATTATTAGATAATGGAGCTTCAGTAAATCAGTGTGATTCAAATGGGAGAACATTATTGGCTAATGCTG
CATATAGTGGCAGTCTTGATGTAGTCAATTTACTTGTCTCTAGGGGAGCAGATTTAGAGATAGAAGATGC
TCATGGACATACACCACTCACTCTAGCGGCTAGACAGGGACATACCAAGGTGGTTAATTGTTTGATTGGG
TGTGGAGCAAATATTAATCATACTGATCAAGATGGTTGGACAGCATTAAGATCTGCTGCTTGGGGTGGCC
ATACTGAGGTAGTTTCTGCACTACTTTATGCTGGCGTAAAAGTGGATTGTGCAGATGCTGATAGCCGAAC
AGCTTTGAGAGCAGCAGCATGGGGAGGACACGAGGATATTGTACTGAATTTGCTACAACATGGCGCTGAA
GTGAACAAAGCTGATAATGAAGGTAGAACTGCTTTGATAGCAGCAGCATACATGGGACATAGAGAGATTG
TGGAACACCTACTGGACCATGGAGCAGAAGTAAATCATGAGGATGTTGATGGCAGGACTGCACTCTCTGT
AGCTGCACTTTGTGTGCCTGCAAGTAAAGGGCACGCATCAGTTGTTAGCCTTTTAATTGATCGAGGTGCT
GAAGTAGATCATTGTGATAAAGATGGCATGACTCCACTGCTGGTAGCTGCCTATGAAGGACATGTTGATG
TGGTTGACTTGCTTCTAGAAGGGGGAGCAGATGTAGATCACACAGATAACAATGGCCGTACACCCCTCTT
AGCAGCAGCGTCTATGGGTCATGCATCAGTTGTAAATACACTTTTGTTTTGGGGTGCAGCTGTGGATAGT
ATTGATAGTGAAGGTAGGACAGTCCTCAGTATAGCTTCAGCACAAGGAAATGTTGAGGTGGTACGTACTC
TACTGGATAGAGGGTTAGATGAAAATCACAGAGATGATGCTGGATGGACACCTTTGCACATGGCAGCTTT
TGAAGGGCACAGATTGATATGTGAAGCACTTATTGAACAAGGTGCTAGAACAAATGAGATTGACAATGAT
GGACGAATCCCTTTCATATTAGCTTCACAAGAGGGTCATTATGATTGTGTTCAAATATTACTGGAAAACA
AATCCAACATTGATCAAAGAGGTTATGATGGAAGAAATGCACTGCGGGTTGCTGCATTAGAAGGGCACAG
GGACATTGTTGAATTGCTTTTTAGCCATGGTGCTGATGTTAACTGCAAAGATGCTGATGGTCGGCCTACA
CTTTATATCTTGGCCTTAGAAAATCAGCTTACAATGGCCGAATATTTTTTAGAAAATGGTGCAAACGTAG
AAGCAAGTGATGCTGAAGGAAGGACAGCACTTCATGTGTCTTGTTGGCAAGGCCATATGGAAATGGTGCA
GGTCCTGATAGCATACCATGCTGACGTCAATGCTGCAGACAATGAAAAGCGCTCTGCTTTGCAGTCTGCA
GCCTGGCAGGGCCATGTAAAAGTGGTTCAGCTTCTGATTGAGCATGGTGCTGTAGTTGACCATACATGTA
ACCAAGGTGCAACTGCACTCTGTATTGCAGCCCAGGAAGGGCACATTGATGTTGTTCAGGTCTTATTAGA
GCATGGTGCTGATCCAAACCATGCTGATCAATTTGGACGCACTGCTATGCGTGTTGCAGCCAAAAATGGA
CATTCTCAGATAATTAAATTATTAGAAAAATATGGTGCATCTAGTTTGAATGGCTGTTCCCCATCTCCTG
TTCACACAATGGAGCAAAAACCTCTACAGTCATTGTCTTCAAAAGTGCAGTCATTAACAATTAAATCAAA
TAGCTCTGGTAGTACTGGTGGAGGGGATATGCAGCCTTCGTTACGTGGTTTACCTAATGGGCCTACTCAT
GCTTTTAGTTCTCCTTCAGAATCTCCAGATTCTACAGTTGACCGGCAGAAGTCATCACTGTCAAATAATT
CCCTGAAAAGCTCAAAAAATTCATCTTTGAGAACTACTTCATCTACAGCAACGGCTCAAACAGTGCCAAT
TGATAGCTTTCATAACTTGTCATTTACAGAACAAATTCAGCAGCATTCATTGCCACGCAGTAGAAGTCGA
CAGTCAATTGTTTCCCCATCTTCCACAACACAGTCCTTAGGACAGAGTCATAATTCACCAAGTAGTGAAT
TTGAGTGGAGTCAAGTAAAGCCCAGTTTGAAGTCAACTAAAGCAAGTAAAGGGGGGAAATCAGAAAATTC
TGCCAAGTCTGGATCAGCTGGGAAAAAAGCGAAACAAAGTAATTCTTCACAGCCAAAGGTTTTAGAATAT
GAAATGACTCAGTTTGATAGAAGAGGACCTATAGCCAAATCCGGGACTGCTGCACCACCTAAACAAATGC
CAGCAGAATCTCAATGCAAAATTATGATACCTTCAGCTCAGCAGGAAATTGGTCGATCTCAACAGCAGTT
TCTTATTCACCAACAAAGTGGGGAACAGAAGAAGAGAAATGGAATAATGACAAATCCAAATTATCATCTT
CAGAGCAACCAGGTTTTTCTTGGTAGGGTTTCAGTCCCACGAACAATGCAAGATAGAGGGCATCAGGAAG
TGTTGGAGGGATACCCTTCCTCAGAGACAGAATTAAGCCTTAAACAAGCTCTGAAGCTTCAGATTGAAGG
TTCTGACCCTAGCTTCAACTATAAAAAGGAAACACCATTATAA

Translation (1250 aa):
MKPPQQSLYLLVDSVDEGCNITEGEQTSTSLSGTVAALLAGHHEFFPPWLLLLCSARKQSKAVTKMFTGF
RKISLDDLRKAYIVKDVQQYILHRLDQEEALRQHLTKETAEMLNQLHIKSSGCFLYLERVLDGVVENFIM
LREIRDIPGTLNGLYLWLCQRLFVRKQFAKVQPILNVILAACRPLTITELYHAVWTKNMSLTLEDFQRKL
DILSKLLVDGLGNTKILFHYSFAEWLLDVKHCTQKYLCNAAEGHRMLAMSYTCQAKNLTPLEAQEFALHL
INSNLQLETAELALWMIWNGTPVRDSLSTLIPKEQEVLQLLVKAGAHVNSEDDRTSCIVRQALEREDSIR
TLLDNGASVNQCDSNGRTLLANAAYSGSLDVVNLLVSRGADLEIEDAHGHTPLTLAARQGHTKVVNCLIG
CGANINHTDQDGWTALRSAAWGGHTEVVSALLYAGVKVDCADADSRTALRAAAWGGHEDIVLNLLQHGAE
VNKADNEGRTALIAAAYMGHREIVEHLLDHGAEVNHEDVDGRTALSVAALCVPASKGHASVVSLLIDRGA
EVDHCDKDGMTPLLVAAYEGHVDVVDLLLEGGADVDHTDNNGRTPLLAAASMGHASVVNTLLFWGAAVDS
IDSEGRTVLSIASAQGNVEVVRTLLDRGLDENHRDDAGWTPLHMAAFEGHRLICEALIEQGARTNEIDND
GRIPFILASQEGHYDCVQILLENKSNIDQRGYDGRNALRVAALEGHRDIVELLFSHGADVNCKDADGRPT
LYILALENQLTMAEYFLENGANVEASDAEGRTALHVSCWQGHMEMVQVLIAYHADVNAADNEKRSALQSA
AWQGHVKVVQLLIEHGAVVDHTCNQGATALCIAAQEGHIDVVQVLLEHGADPNHADQFGRTAMRVAAKNG
HSQIIKLLEKYGASSLNGCSPSPVHTMEQKPLQSLSSKVQSLTIKSNSSGSTGGGDMQPSLRGLPNGPTH
AFSSPSESPDSTVDRQKSSLSNNSLKSSKNSSLRTTSSTATAQTVPIDSFHNLSFTEQIQQHSLPRSRSR
QSIVSPSSTTQSLGQSHNSPSSEFEWSQVKPSLKSTKASKGGKSENSAKSGSAGKKAKQSNSSQPKVLEY
EMTQFDRRGPIAKSGTAAPPKQMPAESQCKIMIPSAQQEIGRSQQQFLIHQQSGEQKKRNGIMTNPNYHL
QSNQVFLGRVSVPRTMQDRGHQEVLEGYPSSETELSLKQALKLQIEGSDPSFNYKKETPL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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