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Report for CCDS52138.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52138.1 Public Mus musculus 7 Tescl 23 108 98 CCDS HistoryNCBI Gene:69301Re-query CCDS DB by CCDS ID:52138.1Re-query CCDS DB by GeneID:69301See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 52138.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000069562.5 ENSMUSP00000064132.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000069562.5Link to Ensembl Protein Viewer:ENSMUSP00000064132.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000069562Re-query CCDS DB by Protein ID:ENSMUSP00000064132
Original member Current member NCBI NM_001163810.1 NP_001157282.1 Accepted alive Link to Nucleotide Sequence:NM_001163810.1Link to Protein Sequence:NP_001157282.1Re-query CCDS DB by Nucleotide ID:NM_001163810Re-query CCDS DB by Protein ID:NP_001157282Link to BLAST:NP_001157282.1

Chromosomal Locations for CCDS 52138.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 24333203 24333898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (696 nt):
ATGGGCGCCTCCCTTTCGTCCAAGGAGGAGTGGGAGCGCGAGAGCAGGACCGACTTATGGTGGGCGCACA
TCCAGGAGGTGTTGAACAAGTGCGACTTCAGCTGGGAGCAGATCAAGCAGCTGCACCAGAGGTTCAGGCT
GCTGAGCGGGGACCAGCCCACCCTACAGCCAGAGAGCTTCGACAACATCCTGGACTTGGAGTTCAATCCG
ATCCGCTCCAGGATCGTCCGCGCCTTCTTCGACAACCGGAACCTGGGCAAAGGGACCAGCGGTCTGGCGG
AGGAGATCACCTTCCAGGACTTCCTGACCATCATCTCCTACTTCCGGCCGCTGCGGCCCAGTCTCAACAA
AGAGGAGGCGGAGCAGAACCGCAAGGACAAGATGCGGTTCCTCTTCAACATGTACGACCAGGACGGCGAT
GGGATCATTACCCTGCAGGAGTACCGCCGGGTGGTGGAGAGCCTGCTGTCGGCGCACCCGCAAGTGGAGA
GAGACACTGTGCGCTCCGTCGCCAATGCCATCGCCCAGGGCGCCTTGAAGGAGGCGGCCAGGGCGTCGGA
CCAGCCGCTGATGGCGGGCCAGCAGTATGAGGGCATCACCTTCGAGGACTTCGTCAAGACCTGGAAGAGC
CTCGAATTGGAGGTGAAGATGCAAGTCAGCTTCCTGAATCTAGAAGCCACGGTCTTATGCCAGTGA

Translation (231 aa):
MGASLSSKEEWERESRTDLWWAHIQEVLNKCDFSWEQIKQLHQRFRLLSGDQPTLQPESFDNILDLEFNP
IRSRIVRAFFDNRNLGKGTSGLAEEITFQDFLTIISYFRPLRPSLNKEEAEQNRKDKMRFLFNMYDQDGD
GIITLQEYRRVVESLLSAHPQVERDTVRSVANAIAQGALKEAARASDQPLMAGQQYEGITFEDFVKTWKS
LELEVKMQVSFLNLEATVLCQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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