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Report for CCDS51761.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51761.1 Public Mus musculus 6 Zfp212 23 108 98 CCDS HistoryNCBI Gene:232784Re-query CCDS DB by CCDS ID:51761.1Re-query CCDS DB by GeneID:232784See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51761.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000009411.8 ENSMUSP00000009411.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000009411.8Link to Ensembl Protein Viewer:ENSMUSP00000009411.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000009411Re-query CCDS DB by Protein ID:ENSMUSP00000009411
Original member Current member NCBI NM_145576.2 NP_663551.2 Accepted alive Link to Nucleotide Sequence:NM_145576.2Link to Protein Sequence:NP_663551.2Re-query CCDS DB by Nucleotide ID:NM_145576Re-query CCDS DB by Protein ID:NP_663551Link to BLAST:NP_663551.2

Chromosomal Locations for CCDS 51761.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 47920726 47920749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 47926507 47926896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 47927020 47927146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 47929050 47929130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 47930711 47931567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1479 nt):
ATGGCGGAGTCGACGCCTACTCGGCACAGGAGGAAACGGCGCGCCACGCCATTAGCTCCAGCCACACCAC
CTTCACAGACAACAGAGAAAAGCCCGTACTTTCAGACCACAGAAATCTCACTTTGGACAGTGGTGGCTGC
TATTCAAGCCGTGGAGAAGAAGATGGAATCACAGGCTGCCCGACTGCAGAGCCTGGAGGGGCGTGCAGGG
TCAGCGGAGAAGAAGCTGGCTGACTTCGAGAAGACAGCTGTGGAGTTCAGCAACCAGCTGGAGGGCAAGT
GGGCCGTGCTGGGGACCCTGCTGCAGGAGTACGGCCTGCTGCAGCGGCGGCTGGAGAATGTGGAGAACCT
GCTTCGAAACAAGAACTTCTGGGTCCTTCGTCTGCCTCCCGGCAGCAAGGGGGAGACCCCAAAGGTATCT
GGGTCCCTTGAGAATGATGGAGTCTGTTTCTCGGAGCAGGAGTGGGAGAACCTGGAGGACTGGCAGAAGG
AGCTCTACAGAAATGTTATGGAAAGCAACTATGAGACGCTGGTGTCTCTGAAGGTCCTTGGCCAGCCAGA
GGAAGAAGTGGAGTTGGGTGCAGAGATGGTGGGTGACTTGGTGGAAGAAGGTACCCACCTGGCAGATAGG
GCCATGGTCAAACAGGAGATGCTGTACAAGCAGGAAGGCCCTGCAGGTCTTCCCAACATGTTTTCCAGTG
CAGTTGAACAGCAGGCTTTCTTTGGCGCGGAGCAGGCTATGTTCTGGAATAGTCCAGGAGATTCTGCCCT
CTTGGAATCAGGCCCTGGGGACTCAAACCCTGAGTCTGTTGAGACCAGTAGAGACCCTGCCCCTGGTAGA
AATCTGGACTGTCCCCGAAAACAGAAGTCTCACAGACAGGTGCAACTGGGTCAGGAGTGTGGACAGGGTC
TGAAGGTGAAGAGGGACTCCAGCCCGTACAAATGTCCCGAGTGCCAGATCAGCTTTCGCTACAAGCAGCA
GCTGACTGCACATTTGCAGAGCCACGCGGGCAGGGAGTCTTACTCTGCCACAGAACCAGAGGAGAGCCTT
AGACCCAGGCCCCGGCTGAAACCACAGGCCAAAAGGTCGAAGCTGCATCAGTGTGATGTGTGCCACAGGA
GCTTCAGCTGCAAGGTCAGCCTGGTGACCCACCAGCGGTGCCATCAGCAGGAAGGCCCCAGCACCAGCCC
ACAAATCCAGGAGAGATTCTCACCGAACAGCTTAGTTGCTTTACCTGGCCACATCCCTTGGAGGAAAAGC
CGGAGTTCTCTCATCTGTGGGTATTGTGGCAAGAGTTTCAGCCACCCATCAGACTTGGTTCGGCACCAGC
GCATTCACACGGGTGAGCGACCCTACAGTTGCCCTGAGTGTGAGAAGAGCTTTGTCCAGAAGCAGCACCT
CCTGCAGCACCAGAAAATTCACCAGCGGGAGCGGGGTGGGCTGGCTTCAGAGTCTGCCAGACCCAATGGC
CTGCTTTAA

Translation (492 aa):
MAESTPTRHRRKRRATPLAPATPPSQTTEKSPYFQTTEISLWTVVAAIQAVEKKMESQAARLQSLEGRAG
SAEKKLADFEKTAVEFSNQLEGKWAVLGTLLQEYGLLQRRLENVENLLRNKNFWVLRLPPGSKGETPKVS
GSLENDGVCFSEQEWENLEDWQKELYRNVMESNYETLVSLKVLGQPEEEVELGAEMVGDLVEEGTHLADR
AMVKQEMLYKQEGPAGLPNMFSSAVEQQAFFGAEQAMFWNSPGDSALLESGPGDSNPESVETSRDPAPGR
NLDCPRKQKSHRQVQLGQECGQGLKVKRDSSPYKCPECQISFRYKQQLTAHLQSHAGRESYSATEPEESL
RPRPRLKPQAKRSKLHQCDVCHRSFSCKVSLVTHQRCHQQEGPSTSPQIQERFSPNSLVALPGHIPWRKS
RSSLICGYCGKSFSHPSDLVRHQRIHTGERPYSCPECEKSFVQKQHLLQHQKIHQRERGGLASESARPNG
LL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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