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Report for CCDS51650.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51650.1 Public Mus musculus 5 Tmem132c 23 108 98 CCDS HistoryNCBI Gene:208213Re-query CCDS DB by CCDS ID:51650.1Re-query CCDS DB by GeneID:208213See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51650.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000119026.7 ENSMUSP00000113090.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000119026.7Link to Ensembl Protein Viewer:ENSMUSP00000113090.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000119026Re-query CCDS DB by Protein ID:ENSMUSP00000113090
Original member Current member NCBI NM_175432.3 NP_780641.2 Accepted alive Link to Nucleotide Sequence:NM_175432.3Link to Protein Sequence:NP_780641.2Re-query CCDS DB by Nucleotide ID:NM_175432Re-query CCDS DB by Protein ID:NP_780641Link to BLAST:NP_780641.2

Chromosomal Locations for CCDS 51650.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 127241915 127242020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 127359555 127360440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 127462904 127463050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 127504862 127505045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 127536358 127536501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 127551503 127551708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 127553074 127553347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 127554626 127554817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 127562906 127564090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3324 nt):
ATGGATGGCGTGACAGCGGCCACGATGCGCTCCGAGGGCGCGGCCCCGAGGCGGGCGGCGCGGTACGGGG
CGCTGAGCCTGGTCCTAGCCACGCTACTGGGCCAAGTGACCGAAAGCCGAGGGGTCATGGATAATATACA
GAGATTCTCTTCATTGCCGCCGTACCTGCCCGTGAGCTTCCACGTCCTCAGAGCCGAGACTGCATTCTTC
CTAAAGGAGGCCAACCCCGACCCGCTGCGGAATGCCAGCCTGCAGTCCAGGGTGGAGTCTTTCTTCATCT
ACAAGGCCCAGCAGCCCCCGGTATTAAACGTCAGCTATGGGCCTTACTCTGCAGAAAAGGTCATCCCTCT
GGACTTGATGTTGAACCCCAACTTTTTAGGCCCAACCAGTAAGTTTCCCTTTGACTGGAGGCTGAAGGCC
TACATCCTTCAAGAGAAAGTCTACCTGAGCCATCCCAAAGTACAGGTGCTCTTCCACATCGTGGGCCGAG
ACTGGGATGACCACAGGGACGAGAAACTGCCCTGCCTGCGGGTCTTTGCGTTCAGAGACAGCCGGGAGGT
TCGAGGCAGCTGTCGTCTGGGTGGGCCCCTGGGACTGTGCGTGGCCCAGCTGGAGATGCTGCCTGGCTGG
TTCAGTCCCCCAGCGGTTGTATCTGGGCGCAGGAGGCCAGCAGAGCGGCCAGAGGGGAGTCCGGTGGAAC
TGTATTATGCTGTACAGCCAGGGGACGAGCGTGGTGACTGCACTGGAGGTGACACCAGGAAGGACAATGC
TATTCGTCCAGGAAAGGATGGACAGGAGGGCAGGACATCCCACCTACAGAAGATTGGCACCATTAGCCTT
TACCGCGCCCAGGACAGCACCCAGCTCAGCGAACTGCGCCTGGATGGCAATGTGGTCATCTGGCTGCCCT
CCCAGCCCGTCAAGCAGGGAGACATAGTCACCGCATCTGTCACCATCGCCAATAACTCTACTGTGGACCA
TTTCATCCTAAGAGCCAAGGTGAAGAAGGGGGTGAACATCCTGACCGTGCAGACCAGCGAGCCTCGGCAG
TGGGATGTGAGGCAAGAGGTGGGCAATGGAGGGAAGCACACCACCACCTCGGTGGCCTGCCAGCGCCTGG
GCCCTGGGGCACGAAATAGGAGCAGCAATTTATTCAGCGAGGTCATGCAGATGAATTTTGAAATCGCCAG
CTTCAGCAGCCTCTCGGGGACACAGCCTATCACATGGCAGGTGGAGTACCCGAGGAAGGGGGCCACGGAC
ATTGCTGTGTCGGAGATCTTCATCAGCCAGAAGGACCTAGTTGCCATCGTCCCCCTTGCTATGGACACTG
AACTCCTGAACACAGCCATCCTCACAGGGAAGACGGTGGCCATGCCTGTCAGGGTGGTGTCGGTGGAAGA
GAATAGCACCCTGAGGGACATCTCGGAGTTGGTGGAGTGCAAGGCCACAGACGAGAATGTCATCAAGGTC
TCGGACCACTGTGACTATGTCTTTGTCAATGGTAAAGAGATCAAGGGCAAGATGGACTCTGTGGTGAACT
TCACCTACCAGCACCTGAGCGCACCGCTGCATGTCACTGTGTGGGTGCCACGGCTTCCCCTGCAGATCGA
GGTCTCTGACACAGAACTCAGCCAGGTTAAGGGCTGGAGAGTCCCCATCGTGGCCAGCAAGAGGCCCACT
CGGGACAGTGAGGAGGAAGAAGAGGAAGAACAGAAAGGCCGGGGTTGTACCCTGCAGTTCCAGCATGCCA
CAGTGCGCGTCCTCACCCAATTTGTATCAGAGGGTGCTGGGCCCTGGGGCCAGCTGAGCCACCTTCTCAG
TCCAGACTGGCAGTTTGACATCACCCACCTGGTGGCTGACTTTATGAAGCTGGAGTCCCCACACATAGCC
ACCCTGCAGGACAGCAGGGTCTTGGTTGGGCGGGAAGTCGGAATGACCACCATCCAGGTGTTGTCTCCCC
TGTCCGACTCCATCTTGGCCGAGAAGACAGTAACTGTGCTGGATGACAAAGTATCTGTGACAGACTTAGC
TGTCCAGGTGGTGGCTGGGCTGTCTGTCACCCTACACCCCATCTCAGAGAACAACAAGGCCACCTCAGCT
GTGGCCATGGCAGAAGAGCTGCTACGTGCCCCAAAAAAGGAAGCTATAATCAGCACATGGCTCCAGTTCA
GTGATGGCTCAGTGACACCCCTGGATATCTACGACTCCAAGGACTTCTCCTTGACTGCCATCTCTTTGGA
CGAGGCTGTCGTGTCCATCCCCCAACCCCTCTCGCCTTGGTGGCCCACCGTGGTAGCTGAAGGAGAAGGC
CAGGGCCCACTGCTCCGGGTCGATATGTCCATTGCCGAAGCCTGTCAGAAATCCAAGCGCAAGAGTGTGC
TGGCTGTTGGCATTGGCCACGTGGGGGTCAAGTTTGGATGGGATGACGCTGACTCCAGCCAGACTGGAGA
AAAGGATGAGGAGGAGATCAAGAACCATGCCAGTGACCGTCGGCAGAAGATTCAGGACCTGGAACGCCCA
GGCCAGGATGAACTATACCATGGCAACTTTCCTGGGGATCGTGAAGAAGGAGCGCTGAGTGCTACCACCA
CTACCAAGTCCCTGCTGGATAACAACGTGGGGAAGAGTGGCAGGCGGGACGGGGCTAGGCTACACAGCAT
ACCCATTGACTTCACCAATTTCCCGGCCCATGTGGACCTCCCCAAGGCCAAGACCAGGGGCACACTGGAG
GAGAATGGTCTCATGCAGACAGCCCATGGCCTGAGTGACCTAGAGATTGGGATGTATGCCCTCCTAGGTG
TCTTCTGCCTGGCCATCCTTGTCTTTCTCATTAACTGCGCCACCTTTGCCTTCAAGTACAGGCACAAACA
GGTGCCTCTGGAAGGCCAGGCATCCATGACCCACTCTCATGACTGGGTCTGGCTGGGCAATGAGGCGGAG
CTCTTGGAGAACATTGGGGACCTGTCCCCACCCCAGGATGAGCACACGACCATCATAGACCGAGGGCTGG
GGGGCTGTGAGGAGAACAACCACTTACTTCTCAACGGTGGCTCCCAAAAGCCCACGCAGAGCCAGGTTCA
CAGGCCGCCAGGCTCCGGGGGACGGCAGACCAGGGAGCCCAGGCAGGAGCCTGCAAACTCACCCACCTCC
AAGATGAAGAAGGTCAAGTTTGCCACATTCACCATCCCACCTGAGGAAAGCTGCCCCACGGTGAACTCCA
TCCTCAGTGGGGAAGATGATATCAAGTGGGTTTGTCAAGACCTGGACGTGGGCGCACCCAAGGAACTCAG
AACCTACCTGGAGAAATTCCAAGACAGTGTGTAG

Translation (1107 aa):
MDGVTAATMRSEGAAPRRAARYGALSLVLATLLGQVTESRGVMDNIQRFSSLPPYLPVSFHVLRAETAFF
LKEANPDPLRNASLQSRVESFFIYKAQQPPVLNVSYGPYSAEKVIPLDLMLNPNFLGPTSKFPFDWRLKA
YILQEKVYLSHPKVQVLFHIVGRDWDDHRDEKLPCLRVFAFRDSREVRGSCRLGGPLGLCVAQLEMLPGW
FSPPAVVSGRRRPAERPEGSPVELYYAVQPGDERGDCTGGDTRKDNAIRPGKDGQEGRTSHLQKIGTISL
YRAQDSTQLSELRLDGNVVIWLPSQPVKQGDIVTASVTIANNSTVDHFILRAKVKKGVNILTVQTSEPRQ
WDVRQEVGNGGKHTTTSVACQRLGPGARNRSSNLFSEVMQMNFEIASFSSLSGTQPITWQVEYPRKGATD
IAVSEIFISQKDLVAIVPLAMDTELLNTAILTGKTVAMPVRVVSVEENSTLRDISELVECKATDENVIKV
SDHCDYVFVNGKEIKGKMDSVVNFTYQHLSAPLHVTVWVPRLPLQIEVSDTELSQVKGWRVPIVASKRPT
RDSEEEEEEEQKGRGCTLQFQHATVRVLTQFVSEGAGPWGQLSHLLSPDWQFDITHLVADFMKLESPHIA
TLQDSRVLVGREVGMTTIQVLSPLSDSILAEKTVTVLDDKVSVTDLAVQVVAGLSVTLHPISENNKATSA
VAMAEELLRAPKKEAIISTWLQFSDGSVTPLDIYDSKDFSLTAISLDEAVVSIPQPLSPWWPTVVAEGEG
QGPLLRVDMSIAEACQKSKRKSVLAVGIGHVGVKFGWDDADSSQTGEKDEEEIKNHASDRRQKIQDLERP
GQDELYHGNFPGDREEGALSATTTTKSLLDNNVGKSGRRDGARLHSIPIDFTNFPAHVDLPKAKTRGTLE
ENGLMQTAHGLSDLEIGMYALLGVFCLAILVFLINCATFAFKYRHKQVPLEGQASMTHSHDWVWLGNEAE
LLENIGDLSPPQDEHTTIIDRGLGGCEENNHLLLNGGSQKPTQSQVHRPPGSGGRQTREPRQEPANSPTS
KMKKVKFATFTIPPEESCPTVNSILSGEDDIKWVCQDLDVGAPKELRTYLEKFQDSV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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