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Report for CCDS51636.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51636.1 Public Mus musculus 5 Oas1h 23 108 98 CCDS HistoryNCBI Gene:246729Re-query CCDS DB by CCDS ID:51636.1Re-query CCDS DB by GeneID:246729See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51636.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000171820.2 ENSMUSP00000132033.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000171820.2Link to Ensembl Protein Viewer:ENSMUSP00000132033.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000171820Re-query CCDS DB by Protein ID:ENSMUSP00000132033
Original member Current member NCBI NM_001159934.1 NP_001153406.1 Accepted alive Link to Nucleotide Sequence:NM_001159934.1Link to Protein Sequence:NP_001153406.1Re-query CCDS DB by Nucleotide ID:NM_001159934Re-query CCDS DB by Protein ID:NP_001153406Link to BLAST:NP_001153406.1

Chromosomal Locations for CCDS 51636.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 120861454 120861657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 120862533 120862821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 120866984 120867180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 120872917 120872946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (720 nt):
ATGGCGAAAAACCTTAGCAGCACTCGGATTGCTCTCTGCAGCACTCCGGCTTGGAGGTTGGATAAGTTCA
TAGAGGGTCACCTCCTTGGTGACATCACCTTCCTTACTGAGCTCAGAACAGACGTGAACTCCATAAGTGC
TTTCCTGAAGGAGAGATGCTTCCAAGGTGCCGCCCACCCTATGAGGGTCTCCAGGGTTGTGATGGGTGGT
TCCTACAATCGATACACTGTGCTCAAGGGCAGGTCAGAGGTCGACCTATTGGTATTCTTTAATAATCTCA
CCTGCTTTGACGATCAGTTCAAGCTACAGAAAGAGGTCATTGAGGAAATTCAGAAACACCTGTGCCAGTT
CCAGCAAGAAAAACGACTGAGAGAGAAGTTTAAGGTCCAGAGCTCAGACCAGCCCAACTTTAGGTCCGTG
AGCTTCAAACTGAGCTACCCCAAGTTTCAGCAGGAGGTGGAATTTCATATGCAGACAGCCTATGATGCCC
TGTATGAAGTGAGAAGAAAAGAGAATCATAACTGTGAAATCTACAACAAAGTATACGCCCGACTCATCCG
TGAGTGCACCATGCTGGGCAAGGAGGGCGAGTTCAACATCTGCTTCATGGAGCTTCAGCAAGACTTTCTG
TGGAAACGTCCATGCGAGCTGAAGAACCTCATTTGTCTGGTCAAGCACTGGTATCAACTGCCAGACAAAA
AAGGATTTGTCTTCCTGTGA

Translation (239 aa):
MAKNLSSTRIALCSTPAWRLDKFIEGHLLGDITFLTELRTDVNSISAFLKERCFQGAAHPMRVSRVVMGG
SYNRYTVLKGRSEVDLLVFFNNLTCFDDQFKLQKEVIEEIQKHLCQFQQEKRLREKFKVQSSDQPNFRSV
SFKLSYPKFQQEVEFHMQTAYDALYEVRRKENHNCEIYNKVYARLIRECTMLGKEGEFNICFMELQQDFL
WKRPCELKNLICLVKHWYQLPDKKGFVFL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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