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Report for CCDS50631.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50631.1 Under review, update Mus musculus 2 Mybpc3 23 108 98 CCDS HistoryNCBI Gene:17868Re-query CCDS DB by CCDS ID:50631.1Re-query CCDS DB by GeneID:17868See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 50631.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000169776.1 ENSMUSP00000127070.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000169776.1Link to Ensembl Protein Viewer:ENSMUSP00000127070.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000169776Re-query CCDS DB by Protein ID:ENSMUSP00000127070
Original member NCBI NM_008653.2 NP_032679.2 Updated not alive Link to Nucleotide Sequence:NM_008653.2Link to Protein Sequence:NP_032679.2Re-query CCDS DB by Nucleotide ID:NM_008653Re-query CCDS DB by Protein ID:NP_032679
Current member NCBI NM_008653.3 NP_032679.3 Pending alive Link to Nucleotide Sequence:NM_008653.3Link to Protein Sequence:NP_032679.3Re-query CCDS DB by Nucleotide ID:NM_008653Re-query CCDS DB by Protein ID:NP_032679Link to BLAST:NP_032679.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032679.3 1270 O70468 1270 99.0551% 0 12

Chromosomal Locations for CCDS 50631.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 91118169 91118217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91119163 91119429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91119978 91120076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91120156 91120263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91120352 91120500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91121025 91121142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91121520 91121568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91121732 91121761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91121902 91121955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91122340 91122342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91122636 91122647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91122855 91123018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91123886 91124018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91124275 91124277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91124384 91124508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91124587 91124692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91124777 91124943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91125259 91125424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91125946 91126052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91126264 91126293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91128653 91128792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91129000 91129080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91130787 91130946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91131373 91131477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91131564 91131752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91132639 91132773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91132853 91133020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91134171 91134259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91134414 91134609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91134790 91134929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91135092 91135251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91135347 91135483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91135736 91135922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 91136104 91136114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3837 nt):
ATGCCTGGTGTGACTGTTCTCAAGATGCCGGAGCCAGGGAAGAAACCAGTGTCAGCCTTCAACAAGAAGC
CAAGGTCAGCGGAGGTGACCGCTGGCAGTGCTGCCGTGTTCGAGGCTGAGACGGAGCGGTCAGGCGTGAA
GGTGCGGTGGCAGCGGGATGGCAGCGACATCACCGCCAATGACAAGTATGGTTTGGCAGCAGAGGGCAAG
CGACACACACTGACAGTGCGGGATGCGAGCCCTGATGACCAGGGTTCCTACGCGGTCATTGCAGGCTCCT
CAAAGGTCAAGTTTGACCTCAAGGTCACAGAGCCAGCCCCTCCAGAGAAGGCAGAATCTGAAGTTGCTCC
AGGAGCCCCCAAAGAAGTCCCTGCTCCAGCCACTGAGTTGGAAGAAAGTGTCTCAAGTCCTGAAGGGTCA
GTCTCGGTAACCCAGGATGGCTCAGCTGCAGAGCATCAGGGAGCCCCTGATGACCCTATTGGCCTCTTTC
TGATGCGACCACAGGATGGTGAGGTGACCGTGGGCGGCAGCATTGTCTTCTCAGCCCGAGTGGCTGGGGC
CAGCCTCCTGAAACCGCCTGTGGTCAAGTGGTTCAAGGGCAAGTGGGTGGACCTGAGCAGCAAAGTGGGC
CAGCACCTGCAGCTGCATGACAGCTATGACAGAGCCAGCAAGGTCTACTTGTTTGAGTTGCACATCACAG
ATGCTCAGACCACTTCTGCTGGGGGCTACCGCTGTGAGGTGTCTACCAAGGACAAATTTGACAGCTGTAA
CTTCAACCTCACTGTCCATGAGGCCATTGGTTCTGGAGACCTGGACCTCAGATCAGCTTTCCGACGCACG
AGCCTGGCGGGAGCAGGTCGGAGAACCAGTGACAGCCATGAAGATGCTGGGACTCTGGACTTTAGTTCCC
TGCTGAAGAAGAGAGACAGTTTCCGGAGGGACTCAAAGCTGGAGGCACCTGCTGAAGAAGACGTGTGGGA
GATCCTGAGACAGGCACCGCCGTCAGAATATGAGCGCATCGCCTTCCAGCACGGAGTCACAGACCTTCGA
GGCATGCTGAAGAGGCTCAAGGGCATGAAGCAGGATGAAAAGAAGAGCACAGCCTTTCAGAAGAAGCTGG
AGCCTGCCTACCAGGTAAACAAGGGCCACAAGATTCGGCTTACTGTGGAACTGGCTGATCCGGACGCCGA
AGTCAAGTGGCTTAAGAATGGACAGGAGATCCAGATGAGTGGCAGCAAGTACATCTTCGAGTCCGTCGGT
GCCAAGCGCACCCTGACCATCAGCCAGTGCTCACTGGCTGACGACGCAGCCTACCAGTGTGTGGTGGGGG
GCGAGAAGTGCAGCACGGAGCTCTTTGTCAAAGAGCCCCCGGTGCTGATCACTCGGTCCCTGGAAGACCA
GCTGGTGATGGTGGGTCAGCGGGTGGAGTTTGAGTGTGAGGTCTCAGAAGAAGGGGCCCAAGTCAAATGG
CTGAAGGATGGGGTTGAGCTGACACGTGAGGAGACCTTCAAATACCGGTTCAAGAAAGATGGGCGGAAAC
ACCACTTGATCATCAATGAAGCAACCCTGGAGGATGCAGGACACTATGCAGTACGCACAAGTGGAGGCCA
GTCACTGGCTGAGCTCATTGTGCAAGAGAAGAAGTTGGAGGTATACCAAAGCATCGCGGACCTGGCAGTG
GGAGCCAAGGACCAGGCTGTGTTTAAGTGTGAGGTTTCAGATGAGAATGTACGCGGCGTGTGGCTGAAGA
ATGGGAAGGAACTGGTGCCTGACAACCGCATAAAGGTGTCCCATATAGGCCGGGTCCACAAACTGACCAT
TGACGATGTCACACCTGCTGATGAGGCTGACTACAGCTTTGTCCCTGAAGGGTTTGCCTGCAACCTGTCT
GCCAAGCTCCACTTCATGGAGGTCAAGATTGACTTTGTGCCTAGGCAGGAACCTCCCAAGATCCACTTGG
ATTGTCCCGGCAGCACACCAGACACCATTGTGGTTGTTGCTGGGAACAAGTTACGCCTGGATGTCCCTAT
TTCTGGAGACCCTGCTCCCACTGTGGTCTGGCAGAAGACTGTAACACAGGGGAAGAAGGCCTCAACTGGG
CCACACCCTGATGCCCCAGAAGATGCTGGTGCTGATGAGGAGTGGGTGTTTGATAAGAAGCTGTTGTGTG
AGACTGAGGGCCGGGTCCGGGTGGAGACCACCAAAGACCGCAGCGTCTTTACAGTCGAAGGGGCAGAGAA
GGAAGATGAAGGTGTCTACACAGTCACAGTAAAGAACCCCGTGGGCGAGGACCAGGTCAACCTCACAGTC
AAGGTCATCGATGTCCCAGATGCTCCTGCGGCCCCTAAGATCAGCAACGTGGGCGAGGACTCCTGCACTG
TGCAGTGGGAACCGCCTGCCTATGATGGCGGGCAGCCGGTCCTGGGATACATCCTGGAGCGCAAGAAGAA
AAAGAGCTACAGGTGGATGAGGCTCAACTTTGATCTGCTGCGGGAGCTGAGCCACGAGGCGAGGCGCATG
ATCGAGGGTGTAGCCTATGAGATGCGAGTCTACGCAGTCAATGCCGTGGGAATGTCCAGGCCCAGCCCTG
CCTCTCAGCCCTTCATGCCTATTGGGCCCCCTGGCGAACCAACCCACTTGGCTGTGGAGGATGTGTCAGA
CACCACTGTCTCACTCAAGTGGCGGCCCCCAGAGCGCGTGGGGGCCGGTGGCCTGGACGGATACAGCGTG
GAGTACTGCCAGGAGGGATGCTCCGAGTGGACACCTGCTCTGCAGGGGCTGACAGAGCGCACATCGATGC
TGGTGAAGGACCTACCCACTGGGGCACGGCTGCTGTTCCGAGTACGGGCACACAATGTGGCAGGTCCTGG
AGGCCCTATCGTCACCAAGGAGCCTGTGACAGTGCAGGAGATACTGCAACGACCACGGCTCCAACTGCCC
AGACACCTGCGCCAGACCATCCAGAAGAAAGTTGGGGAGCCTGTGAACCTCCTCATCCCTTTCCAGGGCA
AACCCCGGCCTCAGGTGACCTGGACCAAAGAGGGGCAGCCCCTGGCAGGTGAGGAGGTGAGCATCCGGAA
CAGCCCCACAGACACGATCTTGTTCATCCGAGCTGCCCGCCGCACCCACTCGGGCACCTACCAGGTGACA
GTTCGCATTGAGAACATGGAGGACAAGGCAACGCTGATCCTGCAGATTGTGGACAAGCCAAGTCCTCCCC
AGGATATCCGGATCGTTGAGACTTGGGGTTTCAATGTGGCTCTGGAGTGGAAGCCACCCCAAGATGATGG
CAATACAGAGATCTGGGGTTATACTGTACAGAAAGCTGACAAGAAGACCATGGAGTGGTTCACGGTTTTG
GAACACTACCGACGCACTCACTGTGTGGTATCAGAGCTTATCATTGGCAATGGCTACTACTTCCGGGTCT
TCAGCCATAACATGGTGGGTTCCAGTGACAAAGCTGCCGCCACCAAGGAGCCAGTCTTTATTCCAAGACC
AGGCATCACATATGAGCCACCCAAATACAAGGCCCTGGACTTCTCTGAGGCCCCAAGCTTCACCCAGCCC
TTGGCAAATCGCTCCATCATTGCAGGCTATAATGCCATCCTCTGCTGTGCTGTCCGAGGTAGTCCTAAGC
CCAAGATTTCCTGGTTCAAGAATGGCCTGGATCTGGGAGAAGATGCTCGCTTCCGCATGTTCTGCAAGCA
GGGAGTATTGACCCTGGAGATCAGGAAACCCTGCCCCTATGATGGTGGTGTCTATGTCTGCAGGGCCACC
AACTTGCAGGGCGAGGCACAGTGTGAGTGCCGCCTGGAGGTGCGAGTTCCTCAGTGA

Translation (1278 aa):
MPGVTVLKMPEPGKKPVSAFNKKPRSAEVTAGSAAVFEAETERSGVKVRWQRDGSDITANDKYGLAAEGK
RHTLTVRDASPDDQGSYAVIAGSSKVKFDLKVTEPAPPEKAESEVAPGAPKEVPAPATELEESVSSPEGS
VSVTQDGSAAEHQGAPDDPIGLFLMRPQDGEVTVGGSIVFSARVAGASLLKPPVVKWFKGKWVDLSSKVG
QHLQLHDSYDRASKVYLFELHITDAQTTSAGGYRCEVSTKDKFDSCNFNLTVHEAIGSGDLDLRSAFRRT
SLAGAGRRTSDSHEDAGTLDFSSLLKKRDSFRRDSKLEAPAEEDVWEILRQAPPSEYERIAFQHGVTDLR
GMLKRLKGMKQDEKKSTAFQKKLEPAYQVNKGHKIRLTVELADPDAEVKWLKNGQEIQMSGSKYIFESVG
AKRTLTISQCSLADDAAYQCVVGGEKCSTELFVKEPPVLITRSLEDQLVMVGQRVEFECEVSEEGAQVKW
LKDGVELTREETFKYRFKKDGRKHHLIINEATLEDAGHYAVRTSGGQSLAELIVQEKKLEVYQSIADLAV
GAKDQAVFKCEVSDENVRGVWLKNGKELVPDNRIKVSHIGRVHKLTIDDVTPADEADYSFVPEGFACNLS
AKLHFMEVKIDFVPRQEPPKIHLDCPGSTPDTIVVVAGNKLRLDVPISGDPAPTVVWQKTVTQGKKASTG
PHPDAPEDAGADEEWVFDKKLLCETEGRVRVETTKDRSVFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTV
KVIDVPDAPAAPKISNVGEDSCTVQWEPPAYDGGQPVLGYILERKKKKSYRWMRLNFDLLRELSHEARRM
IEGVAYEMRVYAVNAVGMSRPSPASQPFMPIGPPGEPTHLAVEDVSDTTVSLKWRPPERVGAGGLDGYSV
EYCQEGCSEWTPALQGLTERTSMLVKDLPTGARLLFRVRAHNVAGPGGPIVTKEPVTVQEILQRPRLQLP
RHLRQTIQKKVGEPVNLLIPFQGKPRPQVTWTKEGQPLAGEEVSIRNSPTDTILFIRAARRTHSGTYQVT
VRIENMEDKATLILQIVDKPSPPQDIRIVETWGFNVALEWKPPQDDGNTEIWGYTVQKADKKTMEWFTVL
EHYRRTHCVVSELIIGNGYYFRVFSHNMVGSSDKAAATKEPVFIPRPGITYEPPKYKALDFSEAPSFTQP
LANRSIIAGYNAILCCAVRGSPKPKISWFKNGLDLGEDARFRMFCKQGVLTLEIRKPCPYDGGVYVCRAT
NLQGEAQCECRLEVRVPQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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