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Report for CCDS50360.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50360.1 Public Mus musculus 19 Ehbp1l1 23 108 98 CCDS HistoryNCBI Gene:114601Re-query CCDS DB by CCDS ID:50360.1Re-query CCDS DB by GeneID:114601See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 50360.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000075606.5 ENSMUSP00000126740.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000075606.5Link to Ensembl Protein Viewer:ENSMUSP00000126740.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000075606Re-query CCDS DB by Protein ID:ENSMUSP00000126740
Original member Current member NCBI NM_001114596.1 NP_001108068.1 Accepted alive Link to Nucleotide Sequence:NM_001114596.1Link to Protein Sequence:NP_001108068.1Re-query CCDS DB by Nucleotide ID:NM_001114596Re-query CCDS DB by Protein ID:NP_001108068Link to BLAST:NP_001108068.1

Chromosomal Locations for CCDS 50360.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 5708326 5708425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5708556 5708670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5708758 5708831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5710211 5710310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5710574 5710697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5710793 5710848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5710969 5711038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5715796 5716494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5716896 5716944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5717039 5717196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5720686 5720726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5720809 5720877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5720972 5721007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5721442 5721584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5721667 5721845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5721957 5722010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5722646 5722741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5722950 5723007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5725917 5726020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2325 nt):
ATGACTTCAGTGTGGAAGCGCCTGCAGCGGGTTGGCAAGCGGGCCGCCAAGTTCCAGTTTGTGGCGTGTT
ACCATGAACTGGTGTTGGAGTGCACCAAGAAGTGGCAGCCTGACAAGCTGGTGGTGGTATGGACTCGGCG
GAACCGAAGGATCTGCTCCAAGGCCCACAGCTGGCAGCCTGGCATCCAGAACCCATACCGTGGCACCGTG
GTATGGATGGTTCCTGAGAACGTGGACATCTCGGTGACCTTGTACAGGGACCCTCATGTGGACCAGTATG
AAACCAAAGAGTGGACTTTTATTATTGAAAATGAGTCCAAGGGACAGCGGAAGGTACTGGCCACAGTTGA
TGTGAACCTAGCCCACCATGCAGGGCCTGTGCCTGCTCAGGTTCCACTTCGACTGCGGCTGAAGCCCAAA
TCTGTGAAGGTGGTGCATGCCGAACTGAGCCTCACCCTTTCTGGGGTGCTGCTGCGAGAAGGCCGTGCCA
CGGATGATGACATGCAGAGTCTGGCCAGCCTCATGAGTGTGAAGCCTAGTGACGTGGGAAACCTGGATGA
CTTTGCTGAGAGTGATGAGGAGGAAGCTAATGGCCCTGGGGCTCCTGAGGTCCGGACTCGAGGCCCCCAG
TCAGGCCGGGGCTGTGCCCCAAGACTGGGACGTTTCCCAGATCTGTCTCGAGAGCTGAAGACACTCTGTG
AAGAAGAAGATGAAGGCCACATACGGCCCCAGCAGGCAGCTGCCAGACCCTCTAGTGCTGAAGACACCAG
CCCTGCCCCAGCACCACCTACCCTGGTCAGCTCCAGCCAGTCCCTGTTGGAGTGGTGCCAAGAGGTCACC
AACGGCTACCGTGGTGTCTGCATCACCAACTTCACCACGTCCTGGCGCAATGGCCTGGCCTTCTGTGCTA
TTTTACATCGATTCTACCCAGACAAGATCGATTATTTCTCCCTTGATCCCCTCAACATCAAACAGAACAA
CAAGCAGGCTTTTGATGGCTTCGCTGCCCTGGGTGTGTCTCGGCTGCTCGAGCCGGCGGACATGGTACTT
CTGTCCGTACCTGACAAGCTCATCGTCATGACGTACCTGTGCCAGATCCGTGCCTTCTGCACTGGGCAGG
AGCTGCAGCTGGTGCAACTGGAGGGCGGCGGTGGCTCTGGCACTTATCGTGTGGGCAACGCCCAGCCGAG
CCTGCCCGACTGTCTGGACGCAGGAGACCTGGCGCAGCGATTACGCGAGCATGGGGCTGAAGTGCCCACA
GAACCTAAGGAGGCTGTGAACCGCGGGACTGGGGCAATACCAAAGGTGGCCTCCAGGGACACGGACCTGA
GCTGCTCCTCTAAGGATGGGGAGGCAGAGGTTGCCCAGGAAGCAATCCCTCAAGAGGCGCCCACCGACGG
CCCTAGAGCCAGGTCGTCCACAACCCCGGTGGTCCCTGCAGAGGGGCTGGTGAACGGAGTGGGGGCGTCA
GGTGGTGTGAGTGGTGTGAGACTGAGACGGTCCTCTGTCAATGGGGAGGCTGGGCCAGTACCTCCACCCC
GAGCACATGGCTCTTTCTCCCACGTGCGGGACGCCGATTTGCTAAAGAAGAGGCGATCGAGGTTAAGGAA
TAGCAACTCTTTCTCTGTGGATGACCAGGACTCTGGAGCTGCAGTTGGAGCAGGGCCTGCAGGGCCTGGA
GCTGTGGAAGGTCCAAACCCTGCCTCCAGCCCTGACGCTAACCCACTCCCAGCCCCAGCCCCACAGCAGC
CGCCCGGTGGGCCCCCTCCTACTGAGGAGTCATCACCCAGCCTGGGGGAAGAGACAGGCCTGCAACGGTT
CCAGGACACAAGTCAGTACGTGTGCGCAGAGCTGCAAGCCCTGGAGCAGGAACAGGGACAGATAGATGGG
AGGGCCGCTGAGGTGGAGAAGCAGCTGAGGAGCCTCATGGAATCAGGTGCCAACAGGCTGCAGGAGGAGG
TGCTGATTCAGGAATGGTTCACCCTGGTCAACAAGAAGAATGCGCTCATCCGGAGGCAGGACCAGCTGCA
GCTGCTCATCGAGGAGCAGGACTTGGAGCGGAGGTTTGAACTGCTGAGCCGAGAGTTGCGGGCCATGCTG
GCCATTGAAGAGTGGCAGAAAACAGTTGCGCAGCAGCACCGCGAGCAACTCCTGTTGGAGGAGCTGGTGT
CTCTGGTGAACCAGAGGGATGAACTGGTCCGGGACCTGGACCAGAAGGAACGGATCGCTCTGGAGGAAGA
TGAGCGCCTAGAACGAGGCCTGGAGCAGAGACGTCGCAAGGTGAGCCGGCAGCTGAGCAGGCGGGAACGC
TGTACCCTGAGCTGA

Translation (774 aa):
MTSVWKRLQRVGKRAAKFQFVACYHELVLECTKKWQPDKLVVVWTRRNRRICSKAHSWQPGIQNPYRGTV
VWMVPENVDISVTLYRDPHVDQYETKEWTFIIENESKGQRKVLATVDVNLAHHAGPVPAQVPLRLRLKPK
SVKVVHAELSLTLSGVLLREGRATDDDMQSLASLMSVKPSDVGNLDDFAESDEEEANGPGAPEVRTRGPQ
SGRGCAPRLGRFPDLSRELKTLCEEEDEGHIRPQQAAARPSSAEDTSPAPAPPTLVSSSQSLLEWCQEVT
NGYRGVCITNFTTSWRNGLAFCAILHRFYPDKIDYFSLDPLNIKQNNKQAFDGFAALGVSRLLEPADMVL
LSVPDKLIVMTYLCQIRAFCTGQELQLVQLEGGGGSGTYRVGNAQPSLPDCLDAGDLAQRLREHGAEVPT
EPKEAVNRGTGAIPKVASRDTDLSCSSKDGEAEVAQEAIPQEAPTDGPRARSSTTPVVPAEGLVNGVGAS
GGVSGVRLRRSSVNGEAGPVPPPRAHGSFSHVRDADLLKKRRSRLRNSNSFSVDDQDSGAAVGAGPAGPG
AVEGPNPASSPDANPLPAPAPQQPPGGPPPTEESSPSLGEETGLQRFQDTSQYVCAELQALEQEQGQIDG
RAAEVEKQLRSLMESGANRLQEEVLIQEWFTLVNKKNALIRRQDQLQLLIEEQDLERRFELLSRELRAML
AIEEWQKTVAQQHREQLLLEELVSLVNQRDELVRDLDQKERIALEEDERLERGLEQRRRKVSRQLSRRER
CTLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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