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Report for CCDS49450.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49450.1 Public Mus musculus 14 Nrg3 23 108 98 CCDS HistoryNCBI Gene:18183Re-query CCDS DB by CCDS ID:49450.1Re-query CCDS DB by GeneID:18183See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49450.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000168810.8 ENSMUSP00000129783.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000168810.8Link to Ensembl Protein Viewer:ENSMUSP00000129783.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000168810Re-query CCDS DB by Protein ID:ENSMUSP00000129783
Original member Current member NCBI NM_001190188.1 NP_001177117.1 Accepted alive Link to Nucleotide Sequence:NM_001190188.1Link to Protein Sequence:NP_001177117.1Re-query CCDS DB by Nucleotide ID:NM_001190188Re-query CCDS DB by Protein ID:NP_001177117Link to BLAST:NP_001177117.1

Chromosomal Locations for CCDS 49450.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 38370533 38371040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 38376334 38376507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 38381624 38381751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 38397230 38397350 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 38407114 38407216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 38509330 38509356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 38668218 38668291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 39011969 39012098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 39471972 39472800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2094 nt):
ATGAGTGAAGGGGCGGCCGGTGCCTCGCCACCTGGTGCCGCTTCGGCAGCCGCCGCCTCAGCCGAGGAGG
GCACCGCGGCGGCTGCGGCGGCGGCGGCGGCGGGCGGGGGCCCGGACGGCGGCGGAGAAGGGGCGGCCGA
ACCTCCCCGGGAGTTACGCTGTAGCGACTGCATCGTGTGGAACCGGCAGCAGACGTGGTTGTGCGTGGTG
CCTCTGTTCATCGGCTTCATCGGCCTGGGGCTCAGCCTCATGCTGCTTAAATGGATCGTGGTAGGCTCCG
TCAAGGAGTACGTGCCCACGGACCTGGTGGACTCCAAGGGAATGGGCCAGGACCCCTTCTTCCTCTCCAA
GCCCAGCTCTTTCCCCAAGGCTATGGAAACCACCACAACAACCACTTCTACCACGTCCCCCGCCACCCCC
TCTGCCGGCGGCGCCGCTTCTTCCAGGACGCCTAACCGGATTAGCACCCGCTTGACCACCATCACACGGG
CACCCACCCGCTTCCCTGGGCACCGGGTTCCCATCCGGGCTAGCCCGCGCTCTACCACAGCACGGAACAC
TGCTGCCCCTCCGACGGTCCTGTCCACCACGGCCCCTTTCTTCAGTAGCAGCACGCCCGGCTCCCGACCC
CCGATGCCAGGAGCCCCCAGTACGCAGGCGATGCCTTCCTGGCCCACTGCGGCGTATGCTACCTCCTCCT
ACCTCCACGATTCCACTCCCTCCTGGACCCTGTCACCCTTTCAGGATGCTGCTGCCGCCTCTTCCTCCTC
ACCCTCTTCCACCTCCTCCACTACCACCACCCCAGAAACTAGCACCAGCCCCAAATTTCATACTACAACA
TACTCCACTGAACGATCTGAGCACTTCAAACCCTGTCGAGACAAGGACCTGGCGTATTGTCTCAATGATG
GTGAATGCTTTGTGATTGAGACCCTGACAGGATCCCATAAGCACTGTCGGTGCAAGGAAGGCTACCAAGG
AGTCCGTTGTGATCAATTTCTGCCGAAAACAGACTCCATCTTATCGGATCCAACAGACCACTTGGGGATT
GAATTCATGGAGAGTGAAGACGTTTATCAAAGGCAGGTGCTGTCAATTTCATGTATCATCTTTGGAATTG
TCATCGTGGGCATGTTCTGTGCAGCATTCTACTTCAAAAGCAAGAAACAAGCTAAACAAATTCAGGAGCA
CCTGAAAGAGTCACAGAATGGGAAGAACTACAGCCTCAAGGCATCCAGCACAAAGTCTGAGAGCTTGATG
AAGAGCCATGTCCATCTACAAAATTATTCAAAGGCGGATAGGCATCCTGTGACTGCGCTGGAGAAAATAA
TGGAGTCAAGTTTTTCAGCTCCCCAGTCGTTCCCAGAAGTCACTTCTCCTGACCGAGGAAGCCAGCCTAT
CAAGCACCACAGCAGAAGTATTTCTTCTTGCTGCAGCCCAGGACAAAGGAGTGGGATGTTGCATAGGAAT
ACTTTCAGAAGGGCACCACCCTCACCCCGAAGTCGACTGGGTGGTATTGTAGGACCAGCATATCAACAAC
TTGAAGAATCAAGAATTCCAGACCAGGATACGATACCTTGCCAAGGGTATGTGTCCAATGGCTTAAGAAC
CCAACAAAATGCATCAATAAATATGCAACTGCCTTCAAGAGAGACAAACCCCTATTTTAATAGCTTGGAT
CAAAAGGACCTGGTGGGTTATTTATCCCCAAGGGCCAATTCTGTGCCCATCATCCCGTCGATGGGTCTAG
AAGAAACCTGCATGCAAATGCCAGGGATTTCTGACGTCAAAAGCATTAAATGGTGCAAAAACTCCTACTC
CGCTGACATTGTCAACGCGAGTATGCCAGTCAGTGATTGTCTTCTAGAAGAACAACAGGAAGTGAAAATA
TTACTAGAGACTGTGCAGGAACAGATCCGGATTCTGACTGATGCCAGACGGTCAGAAGACTTCGAACTGG
CCAGCATGGAAACTGAGGACAGTGCGAGCGAAAACACAGCCTTTCTCCCCCTGAGTCCCACGGCCAAATC
AGAACGAGAGGCACAATTTGTCTTAAGAAATGAAATACAAAGAGACTCTGTGCTAACCAAGTGA

Translation (697 aa):
MSEGAAGASPPGAASAAAASAEEGTAAAAAAAAAGGGPDGGGEGAAEPPRELRCSDCIVWNRQQTWLCVV
PLFIGFIGLGLSLMLLKWIVVGSVKEYVPTDLVDSKGMGQDPFFLSKPSSFPKAMETTTTTTSTTSPATP
SAGGAASSRTPNRISTRLTTITRAPTRFPGHRVPIRASPRSTTARNTAAPPTVLSTTAPFFSSSTPGSRP
PMPGAPSTQAMPSWPTAAYATSSYLHDSTPSWTLSPFQDAAAASSSSPSSTSSTTTTPETSTSPKFHTTT
YSTERSEHFKPCRDKDLAYCLNDGECFVIETLTGSHKHCRCKEGYQGVRCDQFLPKTDSILSDPTDHLGI
EFMESEDVYQRQVLSISCIIFGIVIVGMFCAAFYFKSKKQAKQIQEHLKESQNGKNYSLKASSTKSESLM
KSHVHLQNYSKADRHPVTALEKIMESSFSAPQSFPEVTSPDRGSQPIKHHSRSISSCCSPGQRSGMLHRN
TFRRAPPSPRSRLGGIVGPAYQQLEESRIPDQDTIPCQGYVSNGLRTQQNASINMQLPSRETNPYFNSLD
QKDLVGYLSPRANSVPIIPSMGLEETCMQMPGISDVKSIKWCKNSYSADIVNASMPVSDCLLEEQQEVKI
LLETVQEQIRILTDARRSEDFELASMETEDSASENTAFLPLSPTAKSEREAQFVLRNEIQRDSVLTK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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