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Report for CCDS49226.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49226.1 Public Mus musculus 13 Serpinb9c 23 108 98 CCDS HistoryNCBI Gene:20707Re-query CCDS DB by CCDS ID:49226.1Re-query CCDS DB by GeneID:20707See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49226.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000021837.9 ENSMUSP00000021837.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000021837.9Link to Ensembl Protein Viewer:ENSMUSP00000021837.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000021837Re-query CCDS DB by Protein ID:ENSMUSP00000021837
Original member Current member NCBI NM_001164524.1 NP_001157996.1 Accepted alive Link to Nucleotide Sequence:NM_001164524.1Link to Protein Sequence:NP_001157996.1Re-query CCDS DB by Nucleotide ID:NM_001164524Re-query CCDS DB by Protein ID:NP_001157996Link to BLAST:NP_001157996.1

Chromosomal Locations for CCDS 49226.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 33149978 33150385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33151796 33151951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33154399 33154541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33156360 33156477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33156859 33156996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33157708 33157885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33159685 33159707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1164 nt):
ATGGGAGGCCACAAAGTTGGAAGACCACCCTTCCTGAATATTGTGTATGAAGCAAATGGCACCTTTGCCG
TCAATCTTTTAAGGATGTTATGTAATAACAACCCTTCCAAAAATGTATGCTATTCTCCCATCAACATCTC
CTCTGCTCTAGCTATGTTCCTTTTGGGAGTGAAAGGAAACACCGAAATCCAGATATCTGAGGCAATTGGC
TTAAACACAGCAATAGACATTCATCAGAGCTTCCTGTGGATTCTCAATATCCTGAAGAAGCCAACCAGAA
AGTACACCTTCAGAATGGCCAATAGGCTCTTTGCAGAGAACACTTGTGAATTCCTCCCAACATTTAAGGA
GCCCTGTCTTCAGTTCTATCACTGGGAGATGGAGCACCTCCCCTTCACCAAGGCTCCAGAGGAGGCCAGG
AATCACATAAACACATGGGTCTGCAAAAATACAAAAGGGAAAATTCCAGAATTGTTGTCAAGTGGCTCGG
TTGATTCAGAGACCAGGCTTGTACTTGTCAATGCCTTATATTTCAAAGGAAGATGGCATCACCAGTTTGA
CATAAAGTCCACCAGGAAAATGCCCTTTAAAATAAACAAGGATGAGGAAAGACCAGTGCAGATGATGTTT
CAGGAAGACATGTTTAAGCTCGCCTATGTGAATGAGGTGCAGGTTCAAGTGCTGGTGCTGCCCTATAAGG
GCAAGGAGCTGAGCTTGGTGGTCCTGCTCCCGGATGATGGTGTGGAACTCAGCAAGGTGGAAGGCAATCT
CACTTTTGAGAAGTTATCAGCTTGGACCAAACCAGACTATTTGAAGACCACTAAAGTTTTGGTTTTCCTT
CCAAAATTTAAACTGGAAGATTATTATGACATGGAGTCCATCTTTCAGGACTTGGGAGTGGGGGATATTT
TCCAAGGGGGCAAGGCTGACTTATCAGAAATGTCTCCAGAGAGAGGCCTGTGTGTGTCCAAGTTCATTCA
AAAGTGTGTTGTGGAAGTTAATGAAGAAGGCACAGAAGCTACAGCAGCCACAGCTGATGATACTGTATGT
TCAGCTGAAACTCATGATGGCCAGACTTTCTGTGCTGACCACCCTTTCCTTTTCTTTATCAGGCACAACA
AAACCAACAGCATCCTGTTCTGTGGCAGGTTCTCATTTCCATAA

Translation (387 aa):
MGGHKVGRPPFLNIVYEANGTFAVNLLRMLCNNNPSKNVCYSPINISSALAMFLLGVKGNTEIQISEAIG
LNTAIDIHQSFLWILNILKKPTRKYTFRMANRLFAENTCEFLPTFKEPCLQFYHWEMEHLPFTKAPEEAR
NHINTWVCKNTKGKIPELLSSGSVDSETRLVLVNALYFKGRWHHQFDIKSTRKMPFKINKDEERPVQMMF
QEDMFKLAYVNEVQVQVLVLPYKGKELSLVVLLPDDGVELSKVEGNLTFEKLSAWTKPDYLKTTKVLVFL
PKFKLEDYYDMESIFQDLGVGDIFQGGKADLSEMSPERGLCVSKFIQKCVVEVNEEGTEATAATADDTVC
SAETHDGQTFCADHPFLFFIRHNKTNSILFCGRFSFP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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