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Report for CCDS49204.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49204.1 Public Mus musculus 13 Wdr37 23 108 98 CCDS HistoryNCBI Gene:207615Re-query CCDS DB by CCDS ID:49204.1Re-query CCDS DB by GeneID:207615See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49204.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000164183.8 ENSMUSP00000131469.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000164183.8Link to Ensembl Protein Viewer:ENSMUSP00000131469.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000164183Re-query CCDS DB by Protein ID:ENSMUSP00000131469
Original member Current member EBI ENSMUST00000176922.7 ENSMUSP00000135742.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000176922.7Link to Ensembl Protein Viewer:ENSMUSP00000135742.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000176922Re-query CCDS DB by Protein ID:ENSMUSP00000135742
Original member Current member NCBI NM_001039389.2 NP_001034478.1 Accepted alive Link to Nucleotide Sequence:NM_001039389.2Link to Protein Sequence:NP_001034478.1Re-query CCDS DB by Nucleotide ID:NM_001039389Re-query CCDS DB by Protein ID:NP_001034478Link to BLAST:NP_001034478.1

Chromosomal Locations for CCDS 49204.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 8853553 8853734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 8854000 8854095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 8856832 8856928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 8861088 8861225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (513 nt):
ATGCCCACAGAAAGCGGAAGTTGTTCAACTGCTCGCCAAGCAAAACAAAAGCGCAAGTCTCATAGCCTTT
CTATACGAAGAACTAACAGCTCAGAACAAGAGAGGACTGGACTGCCAAGAGAAATGTTAGAAGGACAAGA
TTCTAAACTGCCGTCCTCAGTTCGCAGTACACTGCTGGAATTGTTTGGCCAGATAGAAAGAGAATTTGAA
AATCTTTACATCGAAAACTTAGAATTGCGCAGAGAAATTGATACTCTTAATGAACGTTTAGCTGGTGAAG
GACAAGCGATCGATGGGGCAGAATTGAGTAAGGGCCAACTCAAAACAAAAGCCAGTCACAGTACCAGTCA
GCTTTCTCAGAAGCTTAAGACCACCTACAAGGCTTCCACCAGCAAGGTATGCAAGGCACTGGCTCTGGAA
CCAGTCATGTGGTGCTTGCGGTGTGCAGATGTGTACTTTAATTTGCACATTTTCCAGTTAGAAATGTGTA
ATAGGAAAATGTCTGGTTTCTAG

Translation (170 aa):
MPTESGSCSTARQAKQKRKSHSLSIRRTNSSEQERTGLPREMLEGQDSKLPSSVRSTLLELFGQIEREFE
NLYIENLELRREIDTLNERLAGEGQAIDGAELSKGQLKTKASHSTSQLSQKLKTTYKASTSKVCKALALE
PVMWCLRCADVYFNLHIFQLEMCNRKMSGF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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