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Report for CCDS47843.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47843.1 Public Homo sapiens 8 PLPP5 24 110 108 CCDS HistoryNCBI Gene:84513Re-query CCDS DB by CCDS ID:47843.1Re-query CCDS DB by GeneID:84513See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47843.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000419686.2 ENSP00000414522.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000419686.2Link to Ensembl Protein Viewer:ENSP00000414522.2Re-query CCDS DB by Nucleotide ID:ENST00000419686Re-query CCDS DB by Protein ID:ENSP00000414522
Original member Current member NCBI NM_001102560.2 NP_001096030.1 Accepted alive Link to Nucleotide Sequence:NM_001102560.2Link to Protein Sequence:NP_001096030.1Re-query CCDS DB by Nucleotide ID:NM_001102560Re-query CCDS DB by Protein ID:NP_001096030Link to BLAST:NP_001096030.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001096030.1 176 Q8NEB5-4 176 100% 0 0

Chromosomal Locations for CCDS 47843.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 38267199 38267391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38267897 38267960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38268371 38268461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38268882 38268990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38269126 38269199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (531 nt):
ATGGGGAAGGCGGCGGCGGCGGTGGCCTTTGGGGCCGAAGTGGGCGTGCGGCTCGCGCTGTTCGCGGCCT
TCCTGGTGACGGAGCTGCTCCCCCCGTTCCAGAGACTCATCCAGCCGGAGGAGATGTGGCTCTACCGGAA
CCCCTACGTGGAGGCGGAGTATTTCCCCACCAAGCCGATGTTTGTTATTGCATTTCTCTCTCCACTGTCT
CTGATCTTCCTGGCCAAATTTCTCAAGAAGGCAGACACAAGAGACAGCAGACAAGCCTGCCTGGCTGCCA
GCCTTGCCCTGGCTCTGAATGGCGTCTTTACCAACACAATAAAACTGATCGTAGGGAGGCCACGCCCAGA
TTTCTTCTACCGCTGCTTCCCTGATGGGCTAGCCCATTCTGACTTGATGTGTACAGGGGATAAGGACGTG
GTGAATGAGGGCCGAAAGAGCTTCCCCAGTGGACATTCTTCCTGTATGAATATCATATGGACTCTACCCT
ATGCTTGTTTTCACATCATTGAATTTAACCTAGAAAGCTAG

Translation (176 aa):
MGKAAAAVAFGAEVGVRLALFAAFLVTELLPPFQRLIQPEEMWLYRNPYVEAEYFPTKPMFVIAFLSPLS
LIFLAKFLKKADTRDSRQACLAASLALALNGVFTNTIKLIVGRPRPDFFYRCFPDGLAHSDLMCTGDKDV
VNEGRKSFPSGHSSCMNIIWTLPYACFHIIEFNLES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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