NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS45215.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45215.1 Public Homo sapiens 15 CDIN1 24 110 108 CCDS HistoryNCBI Gene:84529Re-query CCDS DB by CCDS ID:45215.1Re-query CCDS DB by GeneID:84529See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45215.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000437989.6 ENSP00000401362.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000437989.6Link to Ensembl Protein Viewer:ENSP00000401362.2Re-query CCDS DB by Nucleotide ID:ENST00000437989Re-query CCDS DB by Protein ID:ENSP00000401362
Original member Current member EBI ENST00000566621.6 ENSP00000455397.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000566621.6Link to Ensembl Protein Viewer:ENSP00000455397.1Re-query CCDS DB by Nucleotide ID:ENST00000566621Re-query CCDS DB by Protein ID:ENSP00000455397
Original member Current member NCBI NM_001130010.3 NP_001123482.1 Accepted alive Link to Nucleotide Sequence:NM_001130010.3Link to Protein Sequence:NP_001123482.1Re-query CCDS DB by Nucleotide ID:NM_001130010Re-query CCDS DB by Protein ID:NP_001123482Link to BLAST:NP_001123482.1
Original member Current member NCBI NM_001321759.2 NP_001308688.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001321759.2Link to Protein Sequence:NP_001308688.1Re-query CCDS DB by Nucleotide ID:NM_001321759Re-query CCDS DB by Protein ID:NP_001308688Link to BLAST:NP_001308688.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001123482.1 281 Q9Y2V0-1 281 100% 0 0
NP_001308688.1 281 Q9Y2V0-1 281 100% 0 0

Chromosomal Locations for CCDS 45215.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 36579861 36579961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 36644278 36644323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 36645223 36645287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 36654098 36654158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 36657833 36657905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 36691685 36691764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 36692126 36692175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 36697323 36697390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 36709223 36709288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 36709856 36709961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 36808324 36808453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (846 nt):
ATGATACTGACCAAAGCTCAGTACGACGAGATAGCCCAGTGCCTAGTGTCTGTGCCGCCTACCAGGCAGA
GCCTGAGGAAGCTGAAGCAGAGGTTTCCCAGTCAATCGCAGGCCACTCTGCTGAGCATCTTCTCCCAGGA
GTACCAGAAACACATTAAAAGAACACATGCCAAACATCATACTTCGGAAGCAATTGAAAGTTATTACCAG
AGGTACCTGAATGGAGTGGTGAAAAATGGAGCTGCCCCAGTGCTCCTGGACCTGGCCAATGAGGTGGACT
ATGCGCCCTCATTAATGGCTCGGCTTATACTGGAGAGGTTTCTACAGGAACACGAGGAAACTCCACCCTC
CAAGTCTATTATAAATAGTATGCTACGGGACCCTTCTCAGATTCCAGATGGAGTTCTAGCAAATCAGGTC
TATCAGTGCATTGTGAACGACTGCTGTTACGGACCACTAGTGGACTGCATCAAGCATGCCATTGGTCATG
AGCATGAGGTCCTGCTGAGAGACTTGCTTCTAGAGAAAAACCTGTCCTTCCTAGATGAAGATCAGCTTCG
TGCAAAGGGTTATGACAAAACACCAGACTTCATTTTACAAGTACCAGTTGCTGTAGAAGGGCACATAATT
CACTGGATTGAAAGCAAAGCCTCATTTGGTGATGAATGTAGCCACCACGCCTACCTGCATGACCAGTTCT
GGAGCTACTGGAATAGATTTGGGCCAGGCTTAGTCATCTATTGGTATGGATTTATCCAGGAGCTGGACTG
CAACCGGGAAAGGGGCATCCTGCTCAAAGCCTGTTTCCCCACGAACATTGTCACCTTATGCCACAGCATA
GCTTGA

Translation (281 aa):
MILTKAQYDEIAQCLVSVPPTRQSLRKLKQRFPSQSQATLLSIFSQEYQKHIKRTHAKHHTSEAIESYYQ
RYLNGVVKNGAAPVLLDLANEVDYAPSLMARLILERFLQEHEETPPSKSIINSMLRDPSQIPDGVLANQV
YQCIVNDCCYGPLVDCIKHAIGHEHEVLLRDLLLEKNLSFLDEDQLRAKGYDKTPDFILQVPVAVEGHII
HWIESKASFGDECSHHAYLHDQFWSYWNRFGPGLVIYWYGFIQELDCNRERGILLKACFPTNIVTLCHSI
A


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH