NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS43153.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43153.1 Public Homo sapiens 3 CEP63 24 110 108 CCDS HistoryNCBI Gene:80254Re-query CCDS DB by CCDS ID:43153.1Re-query CCDS DB by GeneID:80254See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43153.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000383229.8 ENSP00000372716.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000383229.8Link to Ensembl Protein Viewer:ENSP00000372716.3Re-query CCDS DB by Nucleotide ID:ENST00000383229Re-query CCDS DB by Protein ID:ENSP00000372716
Original member Current member EBI ENST00000684677.1 ENSP00000507217.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000684677.1Link to Ensembl Protein Viewer:ENSP00000507217.1Re-query CCDS DB by Nucleotide ID:ENST00000684677Re-query CCDS DB by Protein ID:ENSP00000507217
Original member Current member EBI ENST00000683608.1 ENSP00000507704.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000683608.1Link to Ensembl Protein Viewer:ENSP00000507704.1Re-query CCDS DB by Nucleotide ID:ENST00000683608Re-query CCDS DB by Protein ID:ENSP00000507704
Original member Current member EBI ENST00000684217.1 ENSP00000508291.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000684217.1Link to Ensembl Protein Viewer:ENSP00000508291.1Re-query CCDS DB by Nucleotide ID:ENST00000684217Re-query CCDS DB by Protein ID:ENSP00000508291
Original member Current member NCBI NM_001042400.3 NP_001035859.1 Accepted alive Link to Nucleotide Sequence:NM_001042400.3Link to Protein Sequence:NP_001035859.1Re-query CCDS DB by Nucleotide ID:NM_001042400Re-query CCDS DB by Protein ID:NP_001035859Link to BLAST:NP_001035859.1
Original member Current member NCBI NM_001353110.1 NP_001340039.1 Accepted alive Link to Nucleotide Sequence:NM_001353110.1Link to Protein Sequence:NP_001340039.1Re-query CCDS DB by Nucleotide ID:NM_001353110Re-query CCDS DB by Protein ID:NP_001340039Link to BLAST:NP_001340039.1
Original member Current member NCBI NM_001353111.2 NP_001340040.1 Accepted alive Link to Nucleotide Sequence:NM_001353111.2Link to Protein Sequence:NP_001340040.1Re-query CCDS DB by Nucleotide ID:NM_001353111Re-query CCDS DB by Protein ID:NP_001340040Link to BLAST:NP_001340040.1
Original member Current member NCBI NM_001353112.2 NP_001340041.1 Accepted alive Link to Nucleotide Sequence:NM_001353112.2Link to Protein Sequence:NP_001340041.1Re-query CCDS DB by Nucleotide ID:NM_001353112Re-query CCDS DB by Protein ID:NP_001340041Link to BLAST:NP_001340041.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001035859.1 541 Q96MT8-2 541 100% 0 0
NP_001340039.1 541 Q96MT8-2 541 100% 0 0
NP_001340040.1 541 Q96MT8-2 541 100% 0 0
NP_001340041.1 541 Q96MT8-2 541 100% 0 0

Chromosomal Locations for CCDS 43153.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 134495321 134495364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134507109 134507286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134531845 134531940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134532778 134532900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134537155 134537268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134545586 134545819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134546149 134546288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134547335 134547472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134549062 134549176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134550063 134550260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134551926 134552012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134561377 134561535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1626 nt):
ATGGAGGCTTTGTTAGAAGGAATACAAAATCGAGGGCATGGTGGGGGATTTTTGACATCTTGTGAAGCAG
AACTACAGGAGCTCATGAAACAGATTGACATAATGGTGGCTCATAAAAAATCTGAATGGGAAGGACGTAC
ACATGCTCTAGAAACTTGCTTGAAAATCCGTGAACAGGAACTTAAGAGTCTTAGGAGTCAGTTGGATGTG
ACACATAAGGAGGTTGGAATGTTGCATCAGCAGGTAGAAGAACATGAAAAAATCAAGCAAGAGATGACCA
TGGAATATAAGCAGGAGTTGAAGAAACTACATGAAGAATTATGCATACTGAAGAGAAGCTATGAAAAGCT
TCAGAAAAAGCAAATGAGGGAATTCAGAGGAAATACCAAAAATCACAGGGAAGATCGGTCTGAAATTGAG
AGGTTAACTGCAAAAATAGAGGAATTCCGTCAGAAATCGCTGGACTGGGAGAAGCAACGCTTGATTTATC
AGCAACAGGTATCTTCACTGGAGGCACAAAGGAAGGCTCTGGCTGAACAATCAGAGATAATTCAGGCTCA
GCTTGTCAATCGGAAACAGAAATTAGAGTCTGTGGAACTTTCTAGCCAATCAGAAATTCAACACTTAAGC
AGTAAACTGGAGCGGGCTAATGACACTATCTGTGCCAATGAGTTGGAAATAGAGCGCCTCACCATGAGGG
TCAATGACTTGGTTGGAACCAGTATGACTGTCCTACAGGAGCAGCAGCAAAAAGAAGAAAAATTGAGGGA
ATCTGAAAAACTATTAGAGGCTCTGCAGGAAGAAAAGAGAGAATTGAAGGCAGCTCTTCAGTCTCAAGAA
AATCTCATACATGAGGCCAGAATACAAAAGGAGAAGTTACAAGAAAAAGTAAAGGCAACTAACACTCAAC
ATGCTGTAGAAGCTATAAGGCCACGGGAAGAATCTCTGGCAGAAAAGAAGTACACCTCTCAAGGGCAGGG
GGACTTAGACAGTGTGCTCTCCCAGTTGAATTTTACCCATACTAGTGAGGACCTTCTGCAGGCAGAGGTG
ACTTGTCTTGAAGGCAGTTTGGAATCTGTGAGTGCAACGTGTAAACAGCTGAGCCAAGAACTAATGGAAA
AATATGAAGAACTGAAGAGGATGGAAGCACATAACAATGAATACAAAGCAGAGATTAAGAAGTTGAAAGA
ACAGATTTTACAGGGTGAACAAAGTTACAGTTCTGCACTAGAAGGAATGAAGATGGAAATCTCCCATCTA
ACTCAGGAGTTACATCAGCGAGATATCACTATTGCTTCCACCAAAGGTTCTTCCTCAGACATGGAAAAGC
GACTCAGAGCAGAGATGCAAAAGGCAGAAGACAAAGCAGTAGAGCATAAGGAGATTTTGGATCAGCTGGA
GTCACTCAAATTAGAAAATCGTCATCTTTCTGAAATGGTGATGAAATTGGAATTGGGTTTACATGAGTGT
TCCTTGCCTGTATCTCCCCTTGGTTCAATAGCTACCAGATTTTTGGAAGAGGAGGAACTGAGGTCTCATC
ACATTCTAGAGCGCTTGGATGCCCATATTGAAGAACTAAAAAGAGAGAGTGAAAAGACAGTGAGACAATT
CACAGCCTTAAAGTAG

Translation (541 aa):
MEALLEGIQNRGHGGGFLTSCEAELQELMKQIDIMVAHKKSEWEGRTHALETCLKIREQELKSLRSQLDV
THKEVGMLHQQVEEHEKIKQEMTMEYKQELKKLHEELCILKRSYEKLQKKQMREFRGNTKNHREDRSEIE
RLTAKIEEFRQKSLDWEKQRLIYQQQVSSLEAQRKALAEQSEIIQAQLVNRKQKLESVELSSQSEIQHLS
SKLERANDTICANELEIERLTMRVNDLVGTSMTVLQEQQQKEEKLRESEKLLEALQEEKRELKAALQSQE
NLIHEARIQKEKLQEKVKATNTQHAVEAIRPREESLAEKKYTSQGQGDLDSVLSQLNFTHTSEDLLQAEV
TCLEGSLESVSATCKQLSQELMEKYEELKRMEAHNNEYKAEIKKLKEQILQGEQSYSSALEGMKMEISHL
TQELHQRDITIASTKGSSSDMEKRLRAEMQKAEDKAVEHKEILDQLESLKLENRHLSEMVMKLELGLHEC
SLPVSPLGSIATRFLEEEELRSHHILERLDAHIEELKRESEKTVRQFTALK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH