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Report for CCDS41687.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41687.1 Public Homo sapiens 11 ARAP1 24 110 108 CCDS HistoryNCBI Gene:116985Re-query CCDS DB by CCDS ID:41687.1Re-query CCDS DB by GeneID:116985See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41687.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000393609.8 ENSP00000377233.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000393609.8Link to Ensembl Protein Viewer:ENSP00000377233.3Re-query CCDS DB by Nucleotide ID:ENST00000393609Re-query CCDS DB by Protein ID:ENSP00000377233
Original member Current member NCBI NM_001040118.3 NP_001035207.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001040118.3Link to Protein Sequence:NP_001035207.1Re-query CCDS DB by Nucleotide ID:NM_001040118Re-query CCDS DB by Protein ID:NP_001035207Link to BLAST:NP_001035207.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001035207.1 1450 Q96P48-6 1450 100% 0 0

Chromosomal Locations for CCDS 41687.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 72685664 72685681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72686042 72686191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72687439 72687502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72687688 72687738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72688455 72688537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72692753 72692785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72693325 72693470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72693692 72693805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72694980 72695097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72695387 72695455 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72695542 72695628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72695718 72695865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72696549 72696654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72696983 72697195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72697323 72697486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72697598 72697649 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72697911 72698106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72699005 72699107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72699417 72699552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72701649 72701783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72702905 72703079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72704152 72704334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72705805 72705890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72707175 72707374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72709870 72709976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72710385 72710587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72711021 72711141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72711430 72711499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72712196 72712339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72712438 72712568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72713176 72713243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72714152 72714321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72726620 72727128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4353 nt):
ATGGCAGAGGCTGGGGATGCTGCGCTATCGGTGGCCGAGTGGCTGCGGGCATTGCACCTGGAGCAGTACA
CGGGGCTCTTTGAGCAGCATGGCCTGGTGTGGGCCACTGAGTGCCAAGGCCTCAGCGACACCCGCCTGAT
GGACATGGGCATGCTACTCCCTGGTCACCGCCGCCGCATCCTGGCTGGCCTGCTCCGTGCCCATACCTCA
CCGGCCCCTGCACCCCGCCCCACCCCACGGCCTGTGCCCATGAAGCGCCACATCTTCCGCTCACCACCTG
TGCCTGCCACTCCACCCGAGCCGCTGCCCACCACTACAGAGGATGAGGGGCTCCCCGCTGCCCCACCCAT
CCCGCCCCGGAGGAGCTGCCTTCCGCCCACCTGCTTCACCACCCCATCCACAGCTGCCCCAGACCCTGTG
CTGCCCCCGCTGCCTGCTAAGCGGCATTTGGCAGAGCTGAGCGTTCCACCCGTGCCGCCCCGCACCGGAC
CCCCCCGCCTGCTGGTGAGCCTGCCCACTAAGGAGGAGGAGTCATTGCTGCCATCATTATCATCCCCTCC
CCAGCCACAGTCTGAGGAGCCCCTGTCCACCCTCCCCCAGGGGCCTCCCCAGCCTCCCTCTCCACCTCCC
TGCCCCCCGGAGATACCTCCAAAGCCGGTACGCCTGTTCCCAGAGTTCGATGACTCTGACTACGATGAGG
TCCCAGAGGAGGGGCCGGGGGCCCCAGCCAGAGTGATGACCAAGAAGGAGGAGCCCCCACCGAGCCGAGT
CCCACGGGCCGTGCGCGTGGCCAGTCTGCTGAGCGAGGGAGAGGAACTGTCTGGGGACGACCAAGGGGAT
GAGGAAGAGGATGACCACGCCTATGAGGGCGTCCCCAATGGCGGATGGCATACCAGCAGCCTGAGCTTGT
CCTTGCCCAGCACAATAGCTGCGCCACACCCCATGGACGGGCCGCCTGGGGGCTCCACCCCCGTCACACC
AGTCATCAAGGCTGGCTGGCTGGACAAGAACCCACCGCAGGGATCTTACATCTATCAGAAACGATGGGTG
AGACTGGATACTGATCACCTGCGATACTTTGACAGTAACAAGGACGCTTACTCTAAGCGCTTTATCTCTG
TGGCCTGCATCTCCCACGTGGCTGCCATCGGGGACCAGAAGTTTGAAGTGATCACAAACAACCGAACCTT
TGCCTTCCGGGCAGAGAGTGATGTGGAGCGGAAGGAGTGGATGCAGGCCCTGCAGCAGGCCATGGCTGAG
CAGCGTGCCCGGGCCCGGCTCTCTAGCGCTTATCTGCTGGGAGTTCCAGGCTCAGAGCAGCCTGACCGCG
CTGGCAGCCTGGAGCTTCGTGGCTTCAAGAATAAGCTGTACGTGGCCGTGGTCGGGGACAAAGTGCAGCT
CTACAAGAATCTAGAGGAGTACCACCTGGGCATTGGCATCACCTTCATCGACATGAGCGTGGGCAACGTG
AAGGAAGTGGACCGGCGCAGCTTCGACCTCACCACGCCCTACCGCATCTTCAGCTTCTCTGCTGACTCAG
AGCTAGAGAAGGAGCAGTGGTTGGAGGCCATGCAGGGAGCCATCGCTGAGGCCCTGTCTACCTCGGAGGT
GGCCGAGCGCATCTGGGCTGCAGCCCCCAACAGGTTCTGTGCTGACTGCGGGGCTCCTCAGCCTGACTGG
GCCTCCATCAACCTCTGTGTTGTTATCTGCAAGCGCTGTGCAGGGGAGCACCGTGGCCTGGGCGCTGGCG
TCTCCAAGGTGCGGAGCCTGAAGATGGACAGGAAGGTGTGGACAGAAACACTTATCGAGCTCTTCTTACA
GCTGGGGAATGGCGCTGGGAACCGCTTCTGGGCAGCCAACGTGCCCCCCAGTGAGGCCCTGCAGCCCAGC
AGCAGCCCCAGCACCCGGCGGTGCCACCTGGAGGCCAAGTACCGTGAGGGCAAGTACCGCCGCTACCACC
CGCTCTTTGGCAACCAGGAGGAGCTGGACAAGGCCCTGTGTGCTGCAGTCACCACCACAGACCTGGCTGA
GACCCAGGCGCTCCTGGGCTGTGGGGCTGGGATCAACTGCTTCTCGGGGGACCCTGAGGCCCCCACGCCC
CTGGCTCTTGCAGAGCAGGCGGGGCAGACGCTGCAGATGGAATTCCTTCGGAACAACCGGACCACAGAGG
TGCCTCGGCTGGACTCGATGAAGCCCCTGGAAAAGCACTACTCAGTTGTCCTGCCGACCGTGAGCCACAG
TGGCTTCCTCTACAAGACTGCCTCTGCCGGCAAGCTGCTACAGGACCGCCGGGCCCGGGAAGAGTTCAGC
CGGCGCTGGTGTGTCCTTGGTGACGGGGTCCTGAGCTACTTTGAGAATGAGCGGGCAGTGACCCCCAATG
GAGAGATTCGGGCCAGCGAGATTGTGTGCCTGGCAGTGCCCCCTCCTGACACCCATGGCTTTGAGCACAC
CTTTGAGGTGTACACGGAGGGAGAACGGCTGTACCTGTTTGGGCTGGAGAGTGCGGAGCAGGCTCATGAG
TGGGTCAAGTGTATTGCTAAGGCATTCGTGCCTCCCCTAGCCGAGGATCTGCTGGCCCGGGATTTTGAGC
GGCTGGGACGCCTACCCTACAAAGCTGGCCTGAGCCTACAGCGGGCCCAGGAGGGCTGGTTCTCTCTCAG
TGGCTCGGAGCTCCGTGCTGTCTTCCCGGAGGGGCCCTGCGAAGAGCCGCTGCAACTACGGAAACTGCAG
GAGCTTTCCATCCAGGGGGACAGTGAGAACCAGGTGCTGGTGCTGGTGGAGCGAAGGAGGACACTGTACA
TACAGGGCGAGCGGCGGCTGGACTTCATGGGTTGGCTGGGGGCCATCCAGAAAGCAGCCGCCAGCATGGG
GGACACGCTGTCGGAGCAGCAGCTTGGGGACTCGGATATCCCGGTGATCGTGTACCGCTGTGTGGACTAC
ATCACGCAGTGCGGCCTGACCTCCGAGGGCATCTACCGCAAGTGTGGGCAGACATCGAAGACACAGCGGC
TGCTGGAGAGCCTGCGGCAGGATGCGCGCTCTGTGCACCTCAAGGAGGGCGAGCAGCACGTGGATGATGT
TTCCTCGGCGCTCAAGCGCTTCCTGCGCGACCTGCCTGATGGGCTCTTCACTCGCGCCCAGCGCCTAACC
TGGCTGGAGGCCTCAGAGATTGAGGACGAGGAGGAGAAGGTCTCCAGGTACCGAGAGCTGCTGGTGCGGC
TGCCCCCTGTCAACCGGGCCACAGTGAAGGCCCTTATCAGCCACCTGTACTGTGTTCAGTGCTTCTCAGA
CACGAACCAGATGAACGTGCACAACCTGGCAATTGTGTTTGGGCCCACGCTCTTCCAGACAGATGGGCAG
GACTACAAGGCTGGCCGTGTGGTGGAAGACCTCATTAACCACTATGTGGTGGTGTTTAGTGTGGATGAGG
AAGAGCTCAGGAAGCAGCGGGAGGAGATCACTGCCATTGTGAAGATGCGCGTGGCTGGCACTGCCAGTGG
GACCCAGCATGCCGGTGACTTCATCTGCACAGTGTATCTGGAAGAGAAGAAGGCAGAGACTGAGCAGCAT
ATCAAGGTCCCAGCATCCATGACTGCTGAGGAGCTCACCCTGGAGATCCTGGATCGCCGGAACGTGGGCA
TCAGGGAGAAGGACTATTGGACCTGCTTTGAGGTCAACGAGAGGGAGGAGGCAGAGCGCCCCCTGCACTT
TGCGGAGAAGGTGCTGCCCATCCTGCACGGGCTGGGCACGGACAGCCACCTGGTGGTGAAGAAGCACCAG
GCCATGGAGGCCATGCTGCTGTACCTGGCCAGCCGTGTCGGTGACACCAAGCATGGCATGATGAAGTTCC
GTGAGGACCGCAGCCTCCTGGGCCTGGGCCTGCCCTCAGGTGGCTTCCACGATCGCTACTTCATCCTCAA
CAGCAGCTGCTTGCGGCTCTACAAGGAGGTCCGGAGCCAGAGGCCGTGGAGCGGGGCCCCTGAGACCAGT
CACCGGCCTGAGAAGGAGTGGCCTATTAAGAGTCTCAAAGTCTACCTGGGAGTGAAGAAGAAACTCAGGC
CACCCACCTGCTGGGGCTTCACAGTGGTGCATGAGACAGAGAAACATGAGAAGCAGCAGTGGTACCTCTG
CTGTGACACACAGATGGAGCTCCGGGAGTGGTTCGCTACCTTTCTGTTTGTGCAGCATGACGGCCTGGTG
TGGCCCTCAGAGCCCTCACGCGTGTCCCGGGCAGTGCCTGAGGTCCGGCTGGGTAGTGTGTCACTGATCC
CCCTTCGAGGTAGTGAAAATGAAATGCGCCGGAGTGTGGCTGCCTTCACCGCGGACCCTCTGTCTCTTCT
GCGCAACGTCTGA

Translation (1450 aa):
MAEAGDAALSVAEWLRALHLEQYTGLFEQHGLVWATECQGLSDTRLMDMGMLLPGHRRRILAGLLRAHTS
PAPAPRPTPRPVPMKRHIFRSPPVPATPPEPLPTTTEDEGLPAAPPIPPRRSCLPPTCFTTPSTAAPDPV
LPPLPAKRHLAELSVPPVPPRTGPPRLLVSLPTKEEESLLPSLSSPPQPQSEEPLSTLPQGPPQPPSPPP
CPPEIPPKPVRLFPEFDDSDYDEVPEEGPGAPARVMTKKEEPPPSRVPRAVRVASLLSEGEELSGDDQGD
EEEDDHAYEGVPNGGWHTSSLSLSLPSTIAAPHPMDGPPGGSTPVTPVIKAGWLDKNPPQGSYIYQKRWV
RLDTDHLRYFDSNKDAYSKRFISVACISHVAAIGDQKFEVITNNRTFAFRAESDVERKEWMQALQQAMAE
QRARARLSSAYLLGVPGSEQPDRAGSLELRGFKNKLYVAVVGDKVQLYKNLEEYHLGIGITFIDMSVGNV
KEVDRRSFDLTTPYRIFSFSADSELEKEQWLEAMQGAIAEALSTSEVAERIWAAAPNRFCADCGAPQPDW
ASINLCVVICKRCAGEHRGLGAGVSKVRSLKMDRKVWTETLIELFLQLGNGAGNRFWAANVPPSEALQPS
SSPSTRRCHLEAKYREGKYRRYHPLFGNQEELDKALCAAVTTTDLAETQALLGCGAGINCFSGDPEAPTP
LALAEQAGQTLQMEFLRNNRTTEVPRLDSMKPLEKHYSVVLPTVSHSGFLYKTASAGKLLQDRRAREEFS
RRWCVLGDGVLSYFENERAVTPNGEIRASEIVCLAVPPPDTHGFEHTFEVYTEGERLYLFGLESAEQAHE
WVKCIAKAFVPPLAEDLLARDFERLGRLPYKAGLSLQRAQEGWFSLSGSELRAVFPEGPCEEPLQLRKLQ
ELSIQGDSENQVLVLVERRRTLYIQGERRLDFMGWLGAIQKAAASMGDTLSEQQLGDSDIPVIVYRCVDY
ITQCGLTSEGIYRKCGQTSKTQRLLESLRQDARSVHLKEGEQHVDDVSSALKRFLRDLPDGLFTRAQRLT
WLEASEIEDEEEKVSRYRELLVRLPPVNRATVKALISHLYCVQCFSDTNQMNVHNLAIVFGPTLFQTDGQ
DYKAGRVVEDLINHYVVVFSVDEEELRKQREEITAIVKMRVAGTASGTQHAGDFICTVYLEEKKAETEQH
IKVPASMTAEELTLEILDRRNVGIREKDYWTCFEVNEREEAERPLHFAEKVLPILHGLGTDSHLVVKKHQ
AMEAMLLYLASRVGDTKHGMMKFREDRSLLGLGLPSGGFHDRYFILNSSCLRLYKEVRSQRPWSGAPETS
HRPEKEWPIKSLKVYLGVKKKLRPPTCWGFTVVHETEKHEKQQWYLCCDTQMELREWFATFLFVQHDGLV
WPSEPSRVSRAVPEVRLGSVSLIPLRGSENEMRRSVAAFTADPLSLLRNV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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