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Report for CCDS41196.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41196.1 Public Mus musculus X Adgrg2 23 108 98 CCDS HistoryNCBI Gene:237175Re-query CCDS DB by CCDS ID:41196.1Re-query CCDS DB by GeneID:237175See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41196.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000112400.7 ENSMUSP00000108019.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000112400.7Link to Ensembl Protein Viewer:ENSMUSP00000108019.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000112400Re-query CCDS DB by Protein ID:ENSMUSP00000108019
Original member Current member NCBI NM_178712.4 NP_848827.1 Accepted alive Link to Nucleotide Sequence:NM_178712.4Link to Protein Sequence:NP_848827.1Re-query CCDS DB by Nucleotide ID:NM_178712Re-query CCDS DB by Protein ID:NP_848827Link to BLAST:NP_848827.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_848827.1 1009 Q8CJ12-1 1009 100% 0 0

Chromosomal Locations for CCDS 41196.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 160438196 160438313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160456005 160456037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160458835 160458882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160461343 160461381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160463328 160463369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160465578 160465631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160468892 160468947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160469768 160469823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160471756 160471795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160472312 160472349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160474704 160474798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160475491 160475557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160477049 160477440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160478985 160479147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160480227 160480383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160481547 160481690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160482289 160482411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160483083 160483128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160483234 160483337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160484140 160484261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160485644 160485912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160487666 160487765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160488684 160488967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160491398 160491499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160492600 160492752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160496305 160496489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3030 nt):
ATGCTTTTCTCTGGTGGGCAGTACAGCCCTGTTGGCAGACCTGAAGAGGTTTTACTGATATACAAGATAT
TCCTTGTCATCATTTGTTTTCATGTCATTCTCGTTACATCCCTGAAAGAAAACGGTAATTCCAGTTTGTT
ATCACCATCTGCTGAATCATCTCTTGTCAGTCTCATCCCCTACTCCAATGGTACACCAGATGCTGCTTCA
GAAGTTTTGTCGACTTTAAACAAAACAGAAAAATCTAAAATCACTATAGTAAAAACCTTCAATGCATCAG
GAGTCAAATCCCAGAGAAATATCTGCAATTTGTCATCTCTTTGCAATGACTCAGTATTTTTTAGAGGTGA
GATAGTGTTTCAACATGATGAAGACCACAATGTTACCCAGAATCAAGATACAGCTAATGGCACCTTCGCT
GGAGTCCTGTCTCTAAGTGAACTGAAGCGATCAGAGCTCAACAAAACTCTACAGACCTTAAGTGAGACTT
ACTTTATAGTGTGTGCTACAGCAGAGGCCCAAAGCACGGTAAACTGTACATTCACAGTAAAACTCAATGA
GACCATGAATGTGTGTGCCATGATGGTTACTTTCCAAACTGTACAGATTCGGCCAATGGAACAGTGCTGC
TGTTCCCCGAGGACTCCCTGCCCTTCCTCACCAGAAGAGTTAGAAAAACTACAGTGTGAACTGCAGGATC
CCATTGTCTGTCTTGCTGATCAACCGCATGGCCCACCGTTATCGTCTTCCAGCAAGCCTGTTGTACCTCA
GGCCACCATTATTTCCCATGTTGCTAGTGACTTCTCTTTGGCTGAACCCCTTGATCATGCCCTTATGACC
CCAAGCACACCCTCTCTGACACAAGAAAGTAACCTTCCATCTCCTCAGCCTACGATCCCCCTGGCTTCCA
GTCCTGCCACTGACTTGCCAGTTCAATCTGTAGTGGTCTCTTCTTTGCCTCAAACTGATCTTTCCCACAC
CCTGTCACCGGTGCAGTCCTCCATTCCCTCTCCTACCACACCAGCCCCATCTGTCCCTACAGAACTGGTC
ACCATCAGCACACCTCCTGGTGAGACAGTTGTCAACACTAGCACTGTTTCTGATCTGGAAGCCCAAGTAT
CCCAGATGGAGAAAGCTTTGTCTTTGGGTAGCTTAGAGCCTAATCTTGCAGGCGAAATGGTAAACCGAGT
CAGCAAACTCCTTCACTCTCCACCTGCCTTGCTAGCCCCTCTAGCTCAAAGGTTGCTAAAAGTGGTAGAT
GCCATTGGCTTACAGCTGAATTTTTCATCTACAACTATCAGTCTAACTTCACCTTCTTTGGCTCTTGCTG
TGATCAGAGTGAATGCCAGTAATTTCAATACCACGACTTTTGCAGCCCAAGACCCAACAAATCTCCAGGT
TTCTCTGGAAACCCCACCTCCTGAGAATAGTATTGGTGCCATTACTCTGCCCTCATCACTGATGAATAAT
TTGCCAGCTAATGATGTAGAATTGGCTTCAAGGATTCAGTTCAATTTCTTTGAAACACCCGCCCTGTTTC
AGGATCCTTCCCTGGAGAACCTCACTCTGATAAGCTATGTCATATCATCAAGTGTCACAAACATGACCAT
CAAGAACTTGACAAGAAACGTGACAGTCGCACTGAAACACATCAACCCAAGTCCGGATGACTTAACTGTG
AAATGTGTATTCTGGGACTTGGGCAGAAATGGTGGCAAAGGAGGTTGGTCATCTGATGGCTGTTCCGTCA
AAGACAAGAGAATGAATGAAACCATCTGTACCTGTAGCCATCTTACAAGTTTTGGCATCCTATTGGACCT
ATCTCGAACATCCTTACCACCAAGTCAAATGATGGCTCTGACATTTATCACGTATATTGGCTGTGGGCTT
TCATCAATTTTTCTGTCAGTTACTCTTGTAACCTACATCGCCTTTGAAAAGATCCGGAGGGATTACCCCT
CCAAAATCCTCATCCAGCTGTGTGCTGCCCTGCTTCTGCTCAACCTGATCTTCCTCCTAGACTCCTGGAT
TGCGCTGTATAATACCCGAGGTTTCTGCATTGCCGTGGCTGTATTTCTTCACTATTTTCTCTTGGTCTCA
TTCACATGGATGGGATTAGAAGCATTCCACATGTACCTAGCACTGGTCAAGGTGTTTAATACTTACATCC
GAAAGTACATCCTTAAATTCTGCATTGTTGGCTGGGGCATACCAGCTGTGGTTGTGTCCATCGTCCTGAC
TATATCCCCAGATAACTATGGGATTGGATCCTATGGAAAATTCCCCAATGGCACACCAGATGACTTTTGC
TGGATCAACAGCAATGTGGTGTTCTATATCACGGTTGTGGGATATTTCTGTGTGATATTTCTACTGAACG
TCAGCATGTTCATCGTGGTCTTGGTTCAGCTCTGTCGAATTAAAAAGAAGAAGCAGCTGGGAGCCCAGCG
CAAAACTAGTATTCAAGACCTCAGGAGTATCGCTGGCCTCACATTTTTACTGGGAATTACTTGGGGCTTT
GCCTTCTTTGCCTGGGGACCAGTTAATGTCACCTTCATGTATCTCTTTGCCATCTTTAACACCTTACAAG
GGTTTTTCATATTCATTTTTTACTGTGCAGCAAAAGAGAATGTCAGAAAACAGTGGAGGCGGTATCTTTG
TTGTGGAAAATTACGGCTGGCTGAAAATTCTGACTGGAGTAAAACTGCTACTAATGGTTTAAAGAAGCAG
ACTGTAAACCAAGGAGTATCCAGCTCTTCAAATTCCTTACAGTCAAGCTGTAACTCCACTAACTCCACCA
CACTCCTAGTGAATAGTGATTGCTCAGTGCACGCAAGCGGGAATGGCAATGCATCTACCGAGAGGAATGG
GGTTTCTTTCAGTGTTCAGAATGGAGACGTGTGCCTTCATGATCTCACTGGCAAACAGCATATGTTTAGT
GACAAAGAGGACTCCTGCAATGGTAAAAGCCGGATAGCGCTCAGAAGGACTTCGAAGCGGGGAAGCTTAC
ACTTTATCGAGCAAATGTGA

Translation (1009 aa):
MLFSGGQYSPVGRPEEVLLIYKIFLVIICFHVILVTSLKENGNSSLLSPSAESSLVSLIPYSNGTPDAAS
EVLSTLNKTEKSKITIVKTFNASGVKSQRNICNLSSLCNDSVFFRGEIVFQHDEDHNVTQNQDTANGTFA
GVLSLSELKRSELNKTLQTLSETYFIVCATAEAQSTVNCTFTVKLNETMNVCAMMVTFQTVQIRPMEQCC
CSPRTPCPSSPEELEKLQCELQDPIVCLADQPHGPPLSSSSKPVVPQATIISHVASDFSLAEPLDHALMT
PSTPSLTQESNLPSPQPTIPLASSPATDLPVQSVVVSSLPQTDLSHTLSPVQSSIPSPTTPAPSVPTELV
TISTPPGETVVNTSTVSDLEAQVSQMEKALSLGSLEPNLAGEMVNRVSKLLHSPPALLAPLAQRLLKVVD
AIGLQLNFSSTTISLTSPSLALAVIRVNASNFNTTTFAAQDPTNLQVSLETPPPENSIGAITLPSSLMNN
LPANDVELASRIQFNFFETPALFQDPSLENLTLISYVISSSVTNMTIKNLTRNVTVALKHINPSPDDLTV
KCVFWDLGRNGGKGGWSSDGCSVKDKRMNETICTCSHLTSFGILLDLSRTSLPPSQMMALTFITYIGCGL
SSIFLSVTLVTYIAFEKIRRDYPSKILIQLCAALLLLNLIFLLDSWIALYNTRGFCIAVAVFLHYFLLVS
FTWMGLEAFHMYLALVKVFNTYIRKYILKFCIVGWGIPAVVVSIVLTISPDNYGIGSYGKFPNGTPDDFC
WINSNVVFYITVVGYFCVIFLLNVSMFIVVLVQLCRIKKKKQLGAQRKTSIQDLRSIAGLTFLLGITWGF
AFFAWGPVNVTFMYLFAIFNTLQGFFIFIFYCAAKENVRKQWRRYLCCGKLRLAENSDWSKTATNGLKKQ
TVNQGVSSSSNSLQSSCNSTNSTTLLVNSDCSVHASGNGNASTERNGVSFSVQNGDVCLHDLTGKQHMFS
DKEDSCNGKSRIALRRTSKRGSLHFIEQM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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