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Report for CCDS40724.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40724.1 Public Mus musculus 9 Adamts7 23 108 98 CCDS HistoryNCBI Gene:108153Re-query CCDS DB by CCDS ID:40724.1Re-query CCDS DB by GeneID:108153See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40724.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000113060.2 ENSMUSP00000108683.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000113060.2Link to Ensembl Protein Viewer:ENSMUSP00000108683.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000113060Re-query CCDS DB by Protein ID:ENSMUSP00000108683
Original member Current member NCBI NM_001003911.2 NP_001003911.2 Accepted alive Link to Nucleotide Sequence:NM_001003911.2Link to Protein Sequence:NP_001003911.2Re-query CCDS DB by Nucleotide ID:NM_001003911Re-query CCDS DB by Protein ID:NP_001003911Link to BLAST:NP_001003911.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001003911.2 1615 Q68SA9-2 1615 100% 0 0

Chromosomal Locations for CCDS 40724.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 90163245 90163314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90171474 90171829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90173622 90173787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90174472 90174650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90177783 90177866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90178153 90178277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90179323 90179472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90180625 90180771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90185736 90185880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90186460 90186552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90186922 90187067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90188269 90188438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90188659 90188792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90189619 90189739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90190848 90191092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90191365 90191500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90191836 90191962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90192381 90192594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90193025 90194269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90195158 90195310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90195677 90195850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90195931 90196077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90197000 90197162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90199714 90199871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4848 nt):
ATGCACCGTGGTCCGAGTCTCCTCCTGATCCTGTGCGCTCTGGCGTCCCGCGTCCTCGGACCTGCATCAG
GTCTTGTGACTGAGGGCCGGGCGGGTTTGGACATCGTGCACCCGGTGCGAGTGGATGCTGGAGGCTCCTT
CCTGTCCTATGAGCTGTGGCCACGGGTGCTGCGCAAGCGCGATGTGTCCACCACGCAGGCTTCGTCTGCT
TTCTACCAGCTGCAGTACCAAGGGCGGGAACTGCTTTTCAACTTGACCACCAACCCTTATCTGATGGCTC
CCGGCTTTGTGAGTGAGATTCGACGTCACAGCACTTTAGGCCATGCGCACATCCAAACCAGTGTCCCAAC
CTGCCATTTGCTTGGTGATGTCCAGGACCCGGAGCTGGAAGGAGGCTTTGCAGCCATTAGCGCCTGCGAT
GGCCTAAGAGGTGTGTTCCAGCTCTCCAATGAGGACTACTTCATTGAGCCTCTGGATGGAGTTTCAGCTC
AGCCTGGACATGCCCAGCCCCATGTGGTATACAAGCACCAAGGCTCTAGGAAGCAGGCCCAGCAGGGTGA
CTCAAGGCCTTCAGGCACCTGTGGGATGCAAGTGCCCCCAGATCTGGAGCAGCAGCGAGAACATTGGGAA
CAGCAGCAGCAGAAACGGAGGCAGCAGCGATCAGTCAGCAAAGAGAAGTGGGTGGAGACCCTGGTAGTGG
CTGATTCCAAGATGGTCGAGTACCATGGGCAGCCGCAAGTGGAGAGCTATGTGCTGACGATCATGAACAT
GGTGGCTGGACTCTTTCATGATCCAAGCATTGGGAACCCCATTCACATCAGCATTGTGCGCCTTATCATA
CTGGAAGACGAGGAGAAGGACTTAAAGATCACACACCATGCCGAAGAGACTCTGAAGAACTTCTGTAGGT
GGCAGAAGAACATTAACATAAAGGGGGATGACCACCCACAGCACCATGACACTGCCATCCTGCTCACCAG
GAAGGATTTGTGTGCGTCCATGAACCAGCCATGTGAAACCCTGGGCCTGTCTCATGTGTCTGGCTTGTGC
CACCCTCAGCTCAGCTGTAGCGTCAGTGAGGATACTGGCATGCCACTGGCCTTCACTGTGGCCCACGAGC
TAGGACACAGTTTTGGCATTCAGCATGACGGCACCGGCAATGACTGTGAATCCATTGGGAAACGGCCTTT
CATCATGTCTCCACAGCTCCTGTATGACAGAGGCATTCCTCTTACCTGGTCCCGATGCAGCCGCGAGTAC
ATCACCAGGTTCCTTGACCGTGGGTGGGGCCTGTGCTTAGATGACCGTCCATCCAAGGATGTCATTGCAC
TCCCCTCGGTGTTGCCCGGTGTCCTGTATGATGTGAACCACCAGTGCCGCCTTCAGTATGGGTCTCACTC
TGCCTACTGTGAGGACATGGATGATGTCTGCCACACACTATGGTGCTCTGTGGGGACCACCTGTCACTCC
AAGCTGGATGCGGCTGTGGATGGCACGAGCTGTGGGAAGAATAAGTGGTGTCTCAAAGGAGAGTGCGTCC
CTGAGGGCTTCCAGCCCGAGGCGGTGGACGGTGGCTGGTCCGGTTGGAGTGCCTGGTCTGACTGCTCGAG
GAGCTGTGGCGTGGGTGTACGGAGTTCTGAACGACAGTGCACGCAGCCTGTGCCTAAGAACAGAGGCAAG
TACTGTGTGGGGGAGAGGAAGCGGTCCCAGCTCTGCAACCTGCCAGCCTGCCCGCCGGACCGTCCCTCTT
TCCGTCACACCCAGTGTAGCCAGTTTGATGGCATGCTGTACAAGGGCAAGCTCCATAAATGGGTGCCTGT
GCCCAATGACGACAACCCCTGTGAGCTGCACTGCCGGCCTTCCAACTCCTCCAATACAGAGAAGCTGAGG
GATGCTGTGGTGGATGGCACCCCTTGCTACCAAAGCCGCATCAGCCGTGACATCTGCCTCAACGGCATCT
GTAAGAACGTGGGCTGCGACTTTGTGATTGACTCTGGTGCTGAGGAGGACCGCTGTGGCGTGTGCCGGGG
GGATGGCTCTACTTGCCAGACTGTGAGCAGGACCTTCAAGGAGACTGAAGGCCAGGGGTATGTGGATATA
GGGCTGATCCCAGCCGGAGCCAGAGAGATTCTTATTGAGGAGGTGGCTGAGGCTGCCAACTTCCTGGCCC
TGCGGAGTGAGGACCCAGATAAGTACTTCCTCAATGGAGGCTGGACCATCCAGTGGAATGGAGACTACCG
AGTGGCAGGCACTACCTTCACCTATGCACGGAAGGGCAACTGGGAGAATCTCACATCCCCAGGCCCCACC
AGTGAGCCTGTCTGGATCCAGCTGCTGTTCCAGGAGAAGAACCCTGGGGTACACTACCAGTATACCATCC
AGAGGGACAGCCATGATCAAGTCCGACCACCTGAGTTCTCCTGGCATTATGGGCCCTGGAGCAAGTGCAC
GGTCACTTGTGGCACAGGCGTGCAGAGGCAGAGCTTATACTGCATGGAGAGGCAGGCTGGGGTTGTTGCT
GAGGAATACTGTAACACTCTAAATCGGCCCGATGAACGCCAGAGAAAATGCAGTGAGGAGCCCTGTCCCC
CCAGGTGGTGGGCAGGGGAGTGGCAGCCATGTTCCCGATCCTGCGGGCCCGAAGGCCTCTCTCGCCGGGC
TGTGTTCTGCATACGTAGTATGGGGCTGGATGAGCAGCGTGCTCTTGAGCTATCTGCCTGCGAACATCTT
CCCCGTCCCCTGGCTGAAACCCCGTGCAACCGTCATGTAATCTGTCCTTCCACTTGGGGTGTGGGGAACT
GGTCTCAGTATCCCATGTACATAGTGGACACAGGTGCCTCTGGAAGCGGCTCCTCCAGCCCCGAGCTCTT
CAATGAGGTTGACTTCATCCCGAACCAGCTGGCCCCACGACCTTCCCCAGCATCCTCACCCAAGCCGGTC
AGCATCAGCAACGCTATTGATGAGGAGGAACTAGATCCGCCAGGGCCCGTGTTTGTGGATGATTTCTATT
ATGACTACAATTTCATTAACTTCCATGAAGACCTGTCCTATGGGTCCTTTGAAGAACCCCATCCAGACCT
GGTTGATAATGGGGGTTGGACAGCACCACCTCACATCAGACCCACTGAATCTCCCTCAGATACCCCAGTA
CCTACTGCAGGGGCTCTTGGAGCTGAGGCAGAAGACATTCAGGGATCTTGGTCTCCTAGCCCCTTACTCA
GTGAGGCTAGCTATTCCCCACCAGGATTAGAGCAGACCTCCATCAACCCCCTGGCCAATTTCTTGACTGA
GGAAGATACTCCCATGGGGGCCCCTGAACTTGGATTCCCCAGCTTGCCCTGGCCCCCTGCTTCAGTTGAT
GATATGATGACACCTGTTGGCCCTGGAAACCCTGATGAGTTGCTAGTGAAAGAAGATGAGCAGAGCCCAC
CATCCACTCCATGGTCTGATAGGAACAAACTTTCTACAGATGGTAACCCCTTGGGTCATACATCCCCTGC
CCTGCCCCAAAGCCCTATCCCCACACAGCCCTCTCCACCCTCCATCAGTCCTACCCAAGCTTCTCCGAGT
CCTGATGTGGTGGAGGTGTCGACAGGATGGAATGCGGCCTGGGACCCTGTGCTAGAGGCTGACCTGAAGC
CCGGACACGGTGAGCTGCCGTCCACTGTGGAGGTGGCTTCTCCTCCACTTCTTCCCATGGCCACTGTGCC
AGGCATCTGGGGCAGGGACAGCCCTCTTGAACCAGGAACGCCTACCTTTTCCAGCCCAGAACTGAGCTCA
CAGCACCTAAAAACTCTGACAATGCCTGGGACCTTGCTTTTGACAGTACCAACTGACCTGAGGAGCCCGG
GACCATCGGGCCAGCCACAGACCCCTAACCTTGAGGGAACCCAGAGCCCTGGGTTGCTGCCTACACCAGC
TCGGGAGACTCAAACTAACAGTAGCAAGGACCCCGAGGTCCAGCCTTTGCAGCCCAGCCTAGAGGAGGAT
GGTGACCCCGCAGATCCACTGCCTGCCAGGAATGCCAGCTGGCAAGTAGGAAACTGGAGCCAGTGTTCCA
CCACCTGTGGCCTGGGCGCCATCTGGAGGCTAGTGAGCTGCAGCTCTGGCAATGACGAGGACTGCACCCT
CGCTAGCCGTCCCCAGCCTGCCCGCCATTGTCATCTGAGGCCCTGTGCTGCCTGGCGCACGGGCAACTGG
AGTAAGTGCTCTCGAAACTGTGGTGGAGGTTCCTCTACAAGGGATGTACAGTGTGTGGATACACGGGACC
TCCGGCCACTGCGGCCCTTTCACTGCCAGCCCGGGCCTACCAAGCCACCCAACCGTCAGCTCTGTGGGAC
CCAGCCCTGCCTCCCCTGGTACACCTCCTCCTGGAGAGAGTGTTCCGAGGCTTGTGGTGGTGGTGAACAG
CAGCGACTGGTGACATGTCCAGAGCCAGGGCTCTGTGAGGAGTCGCTGAGACCCAACAACAGCAGGCCCT
GCAACACCCACCCCTGCACACAGTGGGTGGTAGGGCCCTGGGGTCAGTGCTCAGCCCCCTGCGGTGGTGG
TGTTCAGCGGCGTCTGGTCAGATGTGTGAACACTCAGACCGGCTTGGCAGAGGAAGACAGTGACCTGTGT
AGCCATGAGGCGTGGCCTGAGAGCTCACGGCCATGTGCCACTGAGGACTGTGAACTGGTTGAACCCCCAC
GTTGTGAGCGGGATCGCCTGTCCTTCAATTTCTGTGAGACGCTGCGCCTGCTGGGCCGCTGCCAGCTGCC
CACCATCCGCGCTCAGTGCTGCCGTTCATGTCCCCCACTCAGTCGTGGTGTCCCTTCCCGAGGCCATCAG
CGGGTAGCCAGACGGTAA

Translation (1615 aa):
MHRGPSLLLILCALASRVLGPASGLVTEGRAGLDIVHPVRVDAGGSFLSYELWPRVLRKRDVSTTQASSA
FYQLQYQGRELLFNLTTNPYLMAPGFVSEIRRHSTLGHAHIQTSVPTCHLLGDVQDPELEGGFAAISACD
GLRGVFQLSNEDYFIEPLDGVSAQPGHAQPHVVYKHQGSRKQAQQGDSRPSGTCGMQVPPDLEQQREHWE
QQQQKRRQQRSVSKEKWVETLVVADSKMVEYHGQPQVESYVLTIMNMVAGLFHDPSIGNPIHISIVRLII
LEDEEKDLKITHHAEETLKNFCRWQKNINIKGDDHPQHHDTAILLTRKDLCASMNQPCETLGLSHVSGLC
HPQLSCSVSEDTGMPLAFTVAHELGHSFGIQHDGTGNDCESIGKRPFIMSPQLLYDRGIPLTWSRCSREY
ITRFLDRGWGLCLDDRPSKDVIALPSVLPGVLYDVNHQCRLQYGSHSAYCEDMDDVCHTLWCSVGTTCHS
KLDAAVDGTSCGKNKWCLKGECVPEGFQPEAVDGGWSGWSAWSDCSRSCGVGVRSSERQCTQPVPKNRGK
YCVGERKRSQLCNLPACPPDRPSFRHTQCSQFDGMLYKGKLHKWVPVPNDDNPCELHCRPSNSSNTEKLR
DAVVDGTPCYQSRISRDICLNGICKNVGCDFVIDSGAEEDRCGVCRGDGSTCQTVSRTFKETEGQGYVDI
GLIPAGAREILIEEVAEAANFLALRSEDPDKYFLNGGWTIQWNGDYRVAGTTFTYARKGNWENLTSPGPT
SEPVWIQLLFQEKNPGVHYQYTIQRDSHDQVRPPEFSWHYGPWSKCTVTCGTGVQRQSLYCMERQAGVVA
EEYCNTLNRPDERQRKCSEEPCPPRWWAGEWQPCSRSCGPEGLSRRAVFCIRSMGLDEQRALELSACEHL
PRPLAETPCNRHVICPSTWGVGNWSQYPMYIVDTGASGSGSSSPELFNEVDFIPNQLAPRPSPASSPKPV
SISNAIDEEELDPPGPVFVDDFYYDYNFINFHEDLSYGSFEEPHPDLVDNGGWTAPPHIRPTESPSDTPV
PTAGALGAEAEDIQGSWSPSPLLSEASYSPPGLEQTSINPLANFLTEEDTPMGAPELGFPSLPWPPASVD
DMMTPVGPGNPDELLVKEDEQSPPSTPWSDRNKLSTDGNPLGHTSPALPQSPIPTQPSPPSISPTQASPS
PDVVEVSTGWNAAWDPVLEADLKPGHGELPSTVEVASPPLLPMATVPGIWGRDSPLEPGTPTFSSPELSS
QHLKTLTMPGTLLLTVPTDLRSPGPSGQPQTPNLEGTQSPGLLPTPARETQTNSSKDPEVQPLQPSLEED
GDPADPLPARNASWQVGNWSQCSTTCGLGAIWRLVSCSSGNDEDCTLASRPQPARHCHLRPCAAWRTGNW
SKCSRNCGGGSSTRDVQCVDTRDLRPLRPFHCQPGPTKPPNRQLCGTQPCLPWYTSSWRECSEACGGGEQ
QRLVTCPEPGLCEESLRPNNSRPCNTHPCTQWVVGPWGQCSAPCGGGVQRRLVRCVNTQTGLAEEDSDLC
SHEAWPESSRPCATEDCELVEPPRCERDRLSFNFCETLRLLGRCQLPTIRAQCCRSCPPLSRGVPSRGHQ
RVARR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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