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Report for CCDS40598.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40598.1 Public Mus musculus 9 Cbl 23 108 98 CCDS HistoryNCBI Gene:12402Re-query CCDS DB by CCDS ID:40598.1Re-query CCDS DB by GeneID:12402See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40598.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000206720.1 ENSMUSP00000146244.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000206720.1Link to Ensembl Protein Viewer:ENSMUSP00000146244.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000206720Re-query CCDS DB by Protein ID:ENSMUSP00000146244
Original member Current member NCBI NM_007619.2 NP_031645.2 Accepted alive Link to Nucleotide Sequence:NM_007619.2Link to Protein Sequence:NP_031645.2Re-query CCDS DB by Nucleotide ID:NM_007619Re-query CCDS DB by Protein ID:NP_031645Link to BLAST:NP_031645.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031645.2 913 P22682 913 100% 0 0

Chromosomal Locations for CCDS 40598.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 44151445 44151737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44152789 44152968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44153761 44153858 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44154190 44154330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44156616 44156710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44158514 44158891 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44158977 44159108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44163339 44163542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44164126 44164257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44164802 44164889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44166453 44166590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44167210 44167331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44169020 44169176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44173253 44173399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44200960 44201207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44233700 44233888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2742 nt):
ATGGCCGGCAACGTGAAGAAGAGCTCGGGCGCCGGCGGCGGCGGCTCTGGGGGCTCGGGAGCGGGCGGCC
TGATCGGGCTCATGAAGGACGCCTTCCAGCCGCACCACCACCACCACCACCTCAGCCCGCACCCTCCCTG
CACGGTGGACAAGAAGATGGTGGAGAAGTGCTGGAAGCTCATGGACAAGGTGGTGCGGTTGTGTCAAAAC
CCAAAGCTGGCGCTCAAGAACAGCCCGCCTTATATCTTAGACCTGCTGCCTGACACCTACCAGCACCTCC
GCACTGTCTTGTCAAGATATGAGGGGAAGATGGAGACGCTTGGAGAAAATGAGTATTTCAGGGTGTTCAT
GGAAAATTTGATGAAGAAAACTAAGCAGACTATCAGCCTCTTCAAGGAGGGAAAAGAAAGGATGTATGAG
GAGAATTCCCAGCCTAGGCGAAACCTGACCAAATTATCCCTGATCTTCAGCCACATGCTGGCAGAACTGA
AAGGCATCTTTCCGAGCGGACTCTTCCAAGGAGACACTTTCCGGATTACTAAAGCTGATGCTGCCGAATT
TTGGAGAAAAGCTTTTGGTGAAAAGACGATAGTCCCGTGGAAGAGCTTTCGACAGGCCCTGCATGAAGTG
CATCCCATCAGTTCTGGGCTGGAGGCCATGGCTCTGAAGTCCACTATTGATCTGACCTGCAATGATTATA
TTTCTGTCTTTGAATTTGATATTTTTACACGGCTGTTTCAGCCCTGGTCCTCTTTGCTCAGAAATTGGAA
CAGCCTTGCTGTAACTCACCCTGGTTACATGGCTTTCCTGACATACGATGAAGTGAAAGCGCGCCTGCAG
AAGTTCATCCACAAACCTGGCAGTTACATCTTTCGGCTGAGCTGTACTCGTTTGGGTCAGTGGGCTATTG
GGTATGTTACTGCCGATGGGAACATTCTGCAGACAATCCCACACAATAAACCGCTCTTCCAAGCACTGAT
TGATGGCTTCAGGGAAGGCTTCTATTTGTTTCCTGATGGACGAAATCAAAATCCTGACCTGACAGGTTTA
TGTGAACCAACTCCTCAAGATCATATCAAAGTAACCCAGGAACAATATGAATTATACTGTGAAATGGGCT
CCACATTTCAACTGTGTAAGATATGTGCTGAGAATGATAAGGATGTGAAGATTGAGCCCTGTGGACACCT
CATGTGCACATCCTGCCTCACGTCGTGGCAGGAATCAGAAGGTCAGGGCTGTCCTTTTTGCCGATGTGAA
ATCAAAGGTACTGAGCCCATCGTGGTGGATCCGTTTGACCCCAGAGGCAGTGGCAGCCTATTAAGGCAAG
GAGCAGAAGGTGCTCCTTCCCCAAATTACGACGATGATGATGATGAACGAGCTGATGATTCTCTCTTCAT
GATGAAGGAGTTGGCAGGTGCCAAGGTGGAAAGGCCTTCCTCTCCATTCTCCATGGCCCCACAAGCTTCC
CTTCCTCCAGTGCCACCAAGACTTGACCTTCTACAGCAGCGAGCACCTGTTCCTGCCAGCACTTCAGTTC
TGGGGACTGCTTCCAAGGCTGCTTCTGGCTCCCTTCATAAAGACAAACCATTGCCAATACCTCCCACACT
TCGAGATCTTCCACCACCACCCCCTCCAGACCGGCCTTACTCTGTTGGAGCAGAAACAAGGCCTCAGAGA
CGCCCTCTGCCTTGTACACCAGGCGATTGTCCATCTAGAGACAAACTGCCCCCTGTCCCTTCTAGCCGCC
CAGGGGACTCGTGGTTGTCTCGGCCAATCCCTAAAGTACCAGTAGCTACTCCAAACCCTGGTGATCCTTG
GAATGGGAGAGAATTGACCAATCGGCACTCGCTTCCATTCTCATTGCCCTCACAAATGGAACCCAGAGCA
GATGTCCCTAGGCTTGGAAGCACATTTAGTCTGGATACCTCTATGACTATGAATAGCAGCCCAGTAGCAG
GTCCAGAGAGTGAGCACCCAAAGATCAAGCCTTCCTCGTCTGCCAACGCCATTTACTCTCTGGCTGCCAG
GCCTCTTCCTATGCCAAAACTGCCACCTGGGGAGCAAGGGGAAAGTGAAGAGGACACAGAATATATGACT
CCCACATCTAGGCCTGTAGGGGTTCAGAAGCCAGAGCCCAAACGGCCGTTAGAGGCAACCCAGAGTTCAC
GAGCATGTGACTGTGACCAGCAGATCGACAGCTGTACCTATGAAGCGATGTATAACATCCAGTCCCAAGC
ACTGTCTGTAGCAGAAAACAGCGCCTCTGGGGAAGGGAATCTGGCCACAGCTCACACGAGTACTGGCCCT
GAGGAATCCGAAAACGAGGATGATGGCTATGATGTGCCTAAGCCACCCGTGCCAGCTGTACTGGCCCGCC
GGACCCTGTCTGACATCTCCAATGCCAGCTCCTCCTTTGGCTGGTTGTCTTTGGATGGTGACCCTACAAA
CTTCAATGAGGGTTCCCAAGTTCCTGAGCGGCCCCCCAAACCATTCCCTCGGAGAATCAACTCAGAACGA
AAAGCCAGTAGCTATCAACAAGGCGGAGGTGCCACTGCTAACCCTGTGGCCACAGCACCCTCACCGCAGC
TCTCAAGTGAGATTGAACGCCTCATGAGTCAGGGCTATTCCTACCAGGACATTCAGAAAGCTTTGGTCAT
TGCCCACAACAACATTGAGATGGCTAAAAACATCCTCCGGGAATTTGTTTCTATTTCTTCTCCTGCTCAC
GTAGCCACCTAG

Translation (913 aa):
MAGNVKKSSGAGGGGSGGSGAGGLIGLMKDAFQPHHHHHHLSPHPPCTVDKKMVEKCWKLMDKVVRLCQN
PKLALKNSPPYILDLLPDTYQHLRTVLSRYEGKMETLGENEYFRVFMENLMKKTKQTISLFKEGKERMYE
ENSQPRRNLTKLSLIFSHMLAELKGIFPSGLFQGDTFRITKADAAEFWRKAFGEKTIVPWKSFRQALHEV
HPISSGLEAMALKSTIDLTCNDYISVFEFDIFTRLFQPWSSLLRNWNSLAVTHPGYMAFLTYDEVKARLQ
KFIHKPGSYIFRLSCTRLGQWAIGYVTADGNILQTIPHNKPLFQALIDGFREGFYLFPDGRNQNPDLTGL
CEPTPQDHIKVTQEQYELYCEMGSTFQLCKICAENDKDVKIEPCGHLMCTSCLTSWQESEGQGCPFCRCE
IKGTEPIVVDPFDPRGSGSLLRQGAEGAPSPNYDDDDDERADDSLFMMKELAGAKVERPSSPFSMAPQAS
LPPVPPRLDLLQQRAPVPASTSVLGTASKAASGSLHKDKPLPIPPTLRDLPPPPPPDRPYSVGAETRPQR
RPLPCTPGDCPSRDKLPPVPSSRPGDSWLSRPIPKVPVATPNPGDPWNGRELTNRHSLPFSLPSQMEPRA
DVPRLGSTFSLDTSMTMNSSPVAGPESEHPKIKPSSSANAIYSLAARPLPMPKLPPGEQGESEEDTEYMT
PTSRPVGVQKPEPKRPLEATQSSRACDCDQQIDSCTYEAMYNIQSQALSVAENSASGEGNLATAHTSTGP
EESENEDDGYDVPKPPVPAVLARRTLSDISNASSSFGWLSLDGDPTNFNEGSQVPERPPKPFPRRINSER
KASSYQQGGGATANPVATAPSPQLSSEIERLMSQGYSYQDIQKALVIAHNNIEMAKNILREFVSISSPAH
VAT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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