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Report for CCDS39668.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
39668.1 Public Mus musculus 6 Klra7 23 108 98 CCDS HistoryNCBI Gene:16638Re-query CCDS DB by CCDS ID:39668.1Re-query CCDS DB by GeneID:16638See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 39668.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000049304.13 ENSMUSP00000037917.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000049304.13Link to Ensembl Protein Viewer:ENSMUSP00000037917.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000049304Re-query CCDS DB by Protein ID:ENSMUSP00000037917
Original member Current member EBI ENSMUST00000088011.10 ENSMUSP00000085326.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000088011.10Link to Ensembl Protein Viewer:ENSMUSP00000085326.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000088011Re-query CCDS DB by Protein ID:ENSMUSP00000085326
Original member Current member NCBI NM_014194.5 NP_055009.5 Accepted alive Link to Nucleotide Sequence:NM_014194.5Link to Protein Sequence:NP_055009.5Re-query CCDS DB by Nucleotide ID:NM_014194Re-query CCDS DB by Protein ID:NP_055009Link to BLAST:NP_055009.5

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055009.5 267 Q60654-2 267 100% 0 0

Chromosomal Locations for CCDS 39668.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 130218900 130219035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 130224085 130224188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 130226439 130226581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 130228515 130228733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 130229935 130230024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 130231506 130231617 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (804 nt):
ATGAGTGAGCAGGAGGTCACTTACTCAACTGTGAGATTTCATGAGTCTTCAAGGTTGCAGAAACTAGTGA
GGACTGAGGAGCCTCAAAGGCCCAGAGAAGCTTGCTACAGAGAGTATTCAGTCCCCTGGAAGCTCATTGT
GATAGCTTGTGGAATCCTCTGTTTCCTTCTCCTGGTAACTGTTGCATTGTTGGCAATAACGATTTTTCAG
CATAGTCAACAAAAACATGAACTACAGGAAACTCTAAATTGCCACGATAACTGCAGCCCCACGCAAAGTG
ACGTCAACTTGAAGGATGAACTGCTGAGAAATAAGTCTATAGAGTGTAGGCCAGGCAATGATCTTCTGGA
ATCCCTCAGCAGGGATCAGAACAGATGGTACAGTGAAACCAAGACTTTTTCAGATTCCTCACAGCACACA
GGTAGAGGTTTTGAAAAATATTGGTTCTGTTATGGTATAAAATGTTATTATTTCAACATGGACAGAAAAA
CGTGGAGTGGATGTAAACAGACCTGCCAGATTTCCAGCTTATCCCTTCTGAAGATAGACAATGAGGATGA
ACTGAAGTTCCTTCAGAACCTGGCTCCTTCAGACATTTCCTGGATTGGATTGTCATATGACAATAAGAAA
AAAGATTGGGTATGGATTGACAATGGCCCATCTAAACTTGCCTTGAACACAACGAAATATAATATAAGAG
ATGGATTATGTATGTCGTTATCTAAAACAAGACTAGACAATGGGGACTGTGATAAATCATACATCTGTAT
TTGTGGTAAGAGACTGGATAAATTTCCTCATTGA

Translation (267 aa):
MSEQEVTYSTVRFHESSRLQKLVRTEEPQRPREACYREYSVPWKLIVIACGILCFLLLVTVALLAITIFQ
HSQQKHELQETLNCHDNCSPTQSDVNLKDELLRNKSIECRPGNDLLESLSRDQNRWYSETKTFSDSSQHT
GRGFEKYWFCYGIKCYYFNMDRKTWSGCKQTCQISSLSLLKIDNEDELKFLQNLAPSDISWIGLSYDNKK
KDWVWIDNGPSKLALNTTKYNIRDGLCMSLSKTRLDNGDCDKSYICICGKRLDKFPH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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