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Report for CCDS37969.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37969.1 Public Mus musculus 19 Btaf1 23 108 98 CCDS HistoryNCBI Gene:107182Re-query CCDS DB by CCDS ID:37969.1Re-query CCDS DB by GeneID:107182See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 37969.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000099494.3 ENSMUSP00000097093.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000099494.3Link to Ensembl Protein Viewer:ENSMUSP00000097093.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000099494Re-query CCDS DB by Protein ID:ENSMUSP00000097093
Original member Current member NCBI NM_001080706.1 NP_001074175.1 Accepted alive Link to Nucleotide Sequence:NM_001080706.1Link to Protein Sequence:NP_001074175.1Re-query CCDS DB by Nucleotide ID:NM_001080706Re-query CCDS DB by Protein ID:NP_001074175Link to BLAST:NP_001074175.1

Chromosomal Locations for CCDS 37969.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 36926388 36926401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36945212 36945335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36949068 36949182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36951034 36951177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36956371 36956534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36958373 36958509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36961639 36961768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36962431 36962499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36965618 36965707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36966492 36966587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36966676 36966852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36969056 36969196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36969914 36970038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36972898 36973018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36978315 36978419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36980577 36980726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36980987 36981129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36981647 36981821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36983449 36983652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36986455 36986881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36987981 36988171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36988876 36989029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36989388 36989497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36990723 36990924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36992436 36992584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36994270 36994422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36994591 36994712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36994799 36994966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36996530 36996607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36997506 36997635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37000092 37000233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37000317 37000447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37002414 37002539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37003488 37003640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37004432 37004643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37009580 37009739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37010012 37010182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37011261 37011404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5547 nt):
ATGGCGGTCTCCAGGCTTGATCGTCTTTTTATCTTACTGGATACTGGTACTACTCCAGTTACAAGAAAGG
CTGCTGCACAGCAACTTGGAGAAGTGGTGAAGCTTCATCCTCATGAATTAAATAATTTGTTATCTAAGGT
ATTAATATATTTAAGGAGTACAAATTGGGATACCCGGATTGCAGCAGGACAAGCTGTTGAAGCTATAGTG
AAAAACGTGCCTGAGTGGAATCCAGTGCCAAGAACCAAACAAGAACCTACAGAGAGTTCTATGGAAGATT
CATCTACTACAGATCGATTAAATTTTGACAGATTTGATATATGCAGATTGTTACAGCATGGGGCATCACT
TTTGGGGTCTGCTGGTGCAGAATTTGAAGTCCAAGATGAAAAATCAGGTGAAGTGGATCCTAAAGAGAGG
ATAGCACGCCAACGGAAATTATTACAGAAGAAACTTGGACTTAATATGGGAGAAGCAATTGGAATGAGTA
CTGAAGAACTCTTCAACGATGAAGATTTGGATTATACCCCAACTTCAGCAGCCCTTGTAAACAAACAATC
TACTCTCCAAGCAGCTGAATTGATTGATTCAGAATTCCGAGCAGGAATGAGTAATAGACAGAAGAACAAA
GCTAAAAGAATGGCCAAGTTATTTGCAAAACAGAGATCCAGGGATGCAGTGGAAACGAATGAGAAGAGCA
ATGACAGCACTGATGGAGAGCCAGAAGAAAAGAGACGGAAAGTAGCAAATGTTGTTATTAATCAGACTGC
AAGTGATTCCAAAGTCTTGATAGATAATGTTCCAGAAAGTTCTTCCTTAATTGAAGAGACAAATGAATGG
CCTTTGGAAAGCTTTTGTGAAGAACTTTGCAATGACCTTTTTAATCCCTCCTGGGAGGTTCGACATGGGG
CAGGTACTGGACTCAGAGAAATTCTTAAAGCTCATGGGAAAAGTGGTGGTAAAATGGGAGACAGCACTTT
AGAGGAGATGATTCAGCAGCATCAAGAGTGGTTGGAAGACTTAGTCATTAGACTCCTTTGTGTTTTTGCG
TTGGACAGATTTGGAGACTTCGTTTCTGATGAAGTTGTAGCGCCAGTTCGTGAGACTTGTGCTCAAACGT
TAGGTGTGGTTTTAAAGCACATGAACGAAACAGGAGTTCATAAGACAGTGGATGTGCTGCTGAAATTATT
GACACAAGAACAGTGGGAAGTTAGACATGGTGGTCTTCTGGGAATAAAATATGCTTTGGCAGTTCGTCAG
GATGTAATTAATACTTTATTGCCTAAAGTCTTAACTCGAATAATCGAAGGACTCCAGGACCTTGATGACG
ATGTTAGAGCTGTTGCTGCAGCATCCCTGGTTCCTGTAGTAGAAAGCCTTGTCTACCTTCAGACACAAAA
GGTACCCTCCATTATAAATACCTTATGGGATTCTCTTCTGGAATTAGATGATCTAACAGCTTCAACAAAT
AGTATTATGACTCTCCTTTCATCCATGTTAACTTACCCTCAGGTCCAGCAATGCAGTATTCAACAGTCAC
TCACAGTTTTAGTCCCACGTGTCTGGCCATTTTTGCATCACACTATATCTTCAGTTCGAAGAGCAGCATT
GGAAACTCTCTTTACATTATTATCAACACAGGACGAGAACTCTTCATCTTGGCTCATACCTATCCTGTCG
GATATGCTGAGACACATTTTTCAGTTTTGTGTTTTAGAAAGCAGCCAGGAAATTCTGGATCTTATTCACA
AGGTTTGGATGGAGCTTTTGAGCAAGGCGTCAGTTCAGTATTTGGTAGCAGCTGCATGCCCATGGATGAG
TGCTTGGCTTTGCCTAATGATGCAGCCTTCTCACTTACCTATTGATTTAAATATGCTGCTGGAAGTAAAA
GCTAGAGCCAAGGAAAAAACAGGTGGTAAGGTACGGCAAGGTCAAATCCAGAATAAAGAAGTGCTTCAGG
AGTATATTGCTGGTGCAGACACCATCATGGAAGACCCAGCGACCAGAGATTTTGTAGTTATGAGGGCCAG
GATGATGGCAGCTAAGTTGTTAGGAGCACTCTGTTGCTATATTTGTGATCCAAGTGTAAATATGGTAAAC
CAGGAAATTAAACCAGCGGATTCCCTTGGCCAGTTACTGCTCTTCTATTTGAATTCCAAATCTGCTTTAC
AGAGAATTAGTGTTGCGTTAGTAATCTGTGAGTGGGCTGCTTTACAAAAGGAGTGTAAAGCTGTTACCCT
AGCTGTGCAACCGCGTTTACTTGATATCCTTTCAGAACATTTGTATTATGATGAAATTGCTGTTCCGTTC
ACACGTATGCAGAATGAATGTAAACAGTTTATATCATCATTAGCTGATGCACATATTGAAGTTGGTAATA
GAGTAAACAACAATGTTTTAACAATAGATCAAGCAAACGACCTGGTAACCACTATTTTTAATGAAGTCAC
ATCAACTTTTGATTTAAATCCTCAAGTGTTACAGCAGTTAGATAGTAAACGGCATCAGGTCCAAATGACA
GTTGCAGAGACGAACCAGGAGTGGCAAGTACTGCAGCTGAGAGTACACACGTTTGCTGCGTGTGCTGTTG
TGAGCTTGCAGCAGCTTCCGGAGAAACTAAATCCTATCATAAAACCATTAATGGAAACGATTAAAAAAGA
AGAGAATACGCTAGTGCAGAACTATGCTGCTCAGTACATAGCTAAGCTTCTTCAGCAGTGTACAACAAGG
ACACCATGCCCTAATTCAAAAGTTATTAAGAACCTCTGTAGCTCTCTTTGTGTGGACCCATACCTCACTC
CCTGTGTTACGTGTCCAGTACCAACACAAAGTGGCCAGGAAAATTCTAAAGGATCCAACTCAGAAAAGGA
TGGAATGCACCATACTGTCACCAAGCACAGGGGGATCATTACACTCTACAGGCATCAGAAAGCAGCATTT
GCTATCACCAGCAGGCGAGGTCCCATCCCCAAAGCAATCAAAGCTCAGATAGCAGATCTACCTGCAGGAA
GTAGTGGGACTATCCTGGTTGAACTTGATGAGGGTCAGAAGCCTTACCTGGTACAGCGGAGAGGAGCTGA
ATTTGCCTTAACAACTATAGTGAAGCATTTTGGTGCTGAAATGGCAGTGAAGTTGCCACATCTTTGGGAT
GCTATGGTTGGCCCATTGAAGTCTATGATTGACCTAAATAATTTTGATGGAAAGTCCCTCCTGGAAAGAG
GTGATGTTCCTGCTCAAGAATTGGTGAATTCCCTGCAAGTGTTTGAAATAGCAGCAGCTTCCATGGACTC
TGCACTTCATCCCTTGCTGGTACAGCACTTGCCTCATCTTTATATGTGCCTTCAGTACCCCAGCACTGCA
GTGAGGCACATGGCGGCTCGTTGCATAGGTGTCATGAGTAAAATAGCTACCATGGAAACAATGAATATTT
TTTTGGAGAAGGTACTTCCTTGGTTGGGAGCAATTGATGACAATGTCAAGCAAGAAGGTGCAATTGAAGC
ACTTGCCTGTGTTATGGAACAATTGGATGTCGGTATTGTTCCATATATTGTCCTTTTAGTTGTTCCTGTA
TTGGGAAGGATGAGTGATCAGACAGACAGTGTGAGATTCATGGCTACTCAGTGCTTTGCAACACTGATTA
GACTGATGCCACTTGAGGCAGGCATTCCAGACCCTCCAAACATGTCAGAAGAATTAATCCAGTTGAAAGC
AAAAGAGCGACACTTTTTAGAGCAATTGTTAGATGGGAAGAAGTTAGAAAATTACAAGATCCCAGTGCCA
ATCAATGCTGAACTCAGGAAATATCAGCAGGATGGTGTGAACTGGTTAGCCTTTCTCAATAAGTATAAGC
TTCATGGAATTCTGTGTGATGACATGGGCTTAGGAAAAACATTACAGTCCATCTGCATTCTAGCAGGAGA
TCACTGTCAGAGGGCCCAGGAATATGCAAGATCGAAATTGGCAGAATGTATGCCACTTCCTTCCTTGGTG
GTTTGTCCACCAACATTAACAGGTCATTGGGTAGATGAAGTAGGTAAATTTTGTTCCAGAGAATATCTCA
ATCCGTTGCATTATACTGGCCCTCCCACTGAAAGGATAAGGTTGCAACATCAAGTAAAAAGGCACAATCT
GATAGTAGCCTCATATGATGTTGTGAGGAATGACATAGACTTTTTTAGAAATATTAAATTTAACTACTGT
ATTCTTGATGAAGGCCATGTCATAAAAAATGGAAAAACCAAGTTGTCCAAAGCAGTAAAGCAGCTGACTG
CTAATTACAGGATTATTCTTTCTGGAACACCAATCCAGAACAATGTTTTGGAGTTGTGGTCATTATTTGA
TTTCCTTATGCCTGGATTTTTGGGTACTGAACGCCAGTTTGCTGCTCGATATGGCAAACCTATATTAGCG
AGTAGGGATGCACGAAGCTCCAGTCGAGAACAAGAAGCAGGTGTCCTGGCAATGGACGCTCTGCACCGCC
AAGTCCTGCCGTTCCTTCTCAGAAGAATGAAAGAAGATGTTTTGCAGGATCTTCCACCTAAAATTATTCA
AGACTATTACTGTACTCTCAGCCCTCTCCAGGTTCAGCTTTATGAAGATTTTGCTAAGTCGCGTGCCAAG
TGTGATGTTGATGAGACCGTGTCTTCAGCTGCACTTTCAGAAGAAACTGAAAAACCAAAACTTAAAGCGA
CAGGTCATGTATTCCAGGCGTTACAATATTTACGTAAGCTCTGCAACCATCCAGCACTGGTCTTAACCCC
TCAGCATCCAGAATTCAAGAGCACTACTGAAAAACTGACCGTTCAGAATTCTTCTCTTCATGATATTCAA
CACGCGCCTAAGCTCTCAGCCTTGAAACAACTGCTGTTGGACTGTGGTTTGGGGAATGGCAGTTCTACAG
AGAGTGGCACAGAGTCTGTTGTGGCACAGCACAGAATACTGATCTTCTGTCAGCTTAAAAGCATGCTTGA
TATAGTAGAACATGATCTGCTCAAGCCTCACCTGCCCTCTGTCACTTACTTGAGACTAGATGGCAGCATA
CCTCCTGGACAGCGGCATTCCATTGTTTCCCGGTTTAACAACGACCCCTCCATCGATGTTCTTCTACTCA
CAACTCACGTTGGTGGCCTGGGCCTGAACTTGACTGGAGCTGACACTGTGGTGTTTGTGGAGCATGACTG
GAACCCTATGCGAGATCTGCAGGCCATGGACCGGGCCCATCGTATTGGGCAGAAACGTGTGGTTAATGTC
TACCGGTTGATAACCAGAGGAACACTAGAAGAAAAGATAATGGGCTTGCAGAAATTCAAGATGAACATCG
CAAATACTGTTATTAGCCAAGAAAACTCTAGCTTACAGAGTATGGGCACTGATCAACTTCTTGACCTGTT
CACTCTAGATAAGGATGGAAAAGCAGAAAAGGCTGACAGCTCCACTTCTGGGAAAGCAAGCATGAAATCA
GTTCTTGAGAACCTGAGTGACCTCTGGGACGCCGAGCAGTATGATTCGGAGTACAACCTGGAGACCTTCA
TGCGCTCTCTCGAGTGA

Translation (1848 aa):
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLIYLRSTNWDTRIAAGQAVEAIV
KNVPEWNPVPRTKQEPTESSMEDSSTTDRLNFDRFDICRLLQHGASLLGSAGAEFEVQDEKSGEVDPKER
IARQRKLLQKKLGLNMGEAIGMSTEELFNDEDLDYTPTSAALVNKQSTLQAAELIDSEFRAGMSNRQKNK
AKRMAKLFAKQRSRDAVETNEKSNDSTDGEPEEKRRKVANVVINQTASDSKVLIDNVPESSSLIEETNEW
PLESFCEELCNDLFNPSWEVRHGAGTGLREILKAHGKSGGKMGDSTLEEMIQQHQEWLEDLVIRLLCVFA
LDRFGDFVSDEVVAPVRETCAQTLGVVLKHMNETGVHKTVDVLLKLLTQEQWEVRHGGLLGIKYALAVRQ
DVINTLLPKVLTRIIEGLQDLDDDVRAVAAASLVPVVESLVYLQTQKVPSIINTLWDSLLELDDLTASTN
SIMTLLSSMLTYPQVQQCSIQQSLTVLVPRVWPFLHHTISSVRRAALETLFTLLSTQDENSSSWLIPILS
DMLRHIFQFCVLESSQEILDLIHKVWMELLSKASVQYLVAAACPWMSAWLCLMMQPSHLPIDLNMLLEVK
ARAKEKTGGKVRQGQIQNKEVLQEYIAGADTIMEDPATRDFVVMRARMMAAKLLGALCCYICDPSVNMVN
QEIKPADSLGQLLLFYLNSKSALQRISVALVICEWAALQKECKAVTLAVQPRLLDILSEHLYYDEIAVPF
TRMQNECKQFISSLADAHIEVGNRVNNNVLTIDQANDLVTTIFNEVTSTFDLNPQVLQQLDSKRHQVQMT
VAETNQEWQVLQLRVHTFAACAVVSLQQLPEKLNPIIKPLMETIKKEENTLVQNYAAQYIAKLLQQCTTR
TPCPNSKVIKNLCSSLCVDPYLTPCVTCPVPTQSGQENSKGSNSEKDGMHHTVTKHRGIITLYRHQKAAF
AITSRRGPIPKAIKAQIADLPAGSSGTILVELDEGQKPYLVQRRGAEFALTTIVKHFGAEMAVKLPHLWD
AMVGPLKSMIDLNNFDGKSLLERGDVPAQELVNSLQVFEIAAASMDSALHPLLVQHLPHLYMCLQYPSTA
VRHMAARCIGVMSKIATMETMNIFLEKVLPWLGAIDDNVKQEGAIEALACVMEQLDVGIVPYIVLLVVPV
LGRMSDQTDSVRFMATQCFATLIRLMPLEAGIPDPPNMSEELIQLKAKERHFLEQLLDGKKLENYKIPVP
INAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCQRAQEYARSKLAECMPLPSLV
VCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKRHNLIVASYDVVRNDIDFFRNIKFNYC
ILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILA
SRDARSSSREQEAGVLAMDALHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAK
CDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTPQHPEFKSTTEKLTVQNSSLHDIQ
HAPKLSALKQLLLDCGLGNGSSTESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSI
PPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNV
YRLITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDGKAEKADSSTSGKASMKS
VLENLSDLWDAEQYDSEYNLETFMRSLE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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