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Report for CCDS37663.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37663.1 Public Mus musculus 17 Dpp9 23 108 98 CCDS HistoryNCBI Gene:224897Re-query CCDS DB by CCDS ID:37663.1Re-query CCDS DB by GeneID:224897See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37663.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000038794.5 ENSMUSP00000046604.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000038794.5Link to Ensembl Protein Viewer:ENSMUSP00000046604.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000038794Re-query CCDS DB by Protein ID:ENSMUSP00000046604
Original member Current member NCBI NM_172624.3 NP_766212.2 Accepted alive Link to Nucleotide Sequence:NM_172624.3Link to Protein Sequence:NP_766212.2Re-query CCDS DB by Nucleotide ID:NM_172624Re-query CCDS DB by Protein ID:NP_766212Link to BLAST:NP_766212.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766212.2 862 Q8BVG4-1 862 100% 0 0

Chromosomal Locations for CCDS 37663.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 56187369 56187461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56188268 56188379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56189323 56189465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56189990 56190142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56190685 56190831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56191014 56191159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56194416 56194551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56194908 56195060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56196088 56196167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56198972 56199134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56199256 56199433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56200583 56200683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56202841 56202902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56204172 56204300 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56205194 56205307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56205453 56205621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56205697 56205870 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56206777 56206889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56211580 56211802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2589 nt):
ATGTGCAGCGGGGTCTCCCCAGTTGAGCAGGTGGCCGCAGGGGACATGGATGACACGGCAGCACGCTTCT
GTGTGCAGAAGCACTCGTGGGATGGGCTGCGTAGCATTATCCACGGCAGTCGCAAGTCCTCGGGCCTCAT
TGTCAGCAAGGCCCCCCACGACTTCCAGTTTGTGCAGAAGCCTGACGAGTCTGGCCCCCACTCTCACCGT
CTCTATTACCTCGGAATGCCTTACGGCAGCCGTGAGAACTCCCTCCTCTACTCCGAGATCCCCAAGAAAG
TGCGGAAGGAGGCCCTGCTGCTGCTGTCCTGGAAGCAGATGCTGGACCACTTCCAGGCCACACCCCACCA
TGGTGTCTACTCCCGAGAGGAGGAGCTACTGCGGGAGCGCAAGCGCCTGGGCGTCTTCGGAATCACCTCT
TATGACTTCCACAGTGAGAGCGGCCTCTTCCTCTTCCAGGCCAGCAATAGCCTGTTCCACTGCAGGGATG
GTGGCAAGAATGGCTTTATGGTGTCCCCGATGAAGCCACTGGAGATCAAGACTCAGTGTTCTGGGCCACG
CATGGACCCCAAAATCTGCCCCGCAGACCCTGCCTTCTTTTCCTTCATCAACAACAGTGATCTGTGGGTG
GCAAACATCGAGACTGGGGAGGAACGGCGGCTCACCTTCTGTCACCAGGGTTCAGCTGGTGTCCTGGACA
ATCCCAAATCAGCAGGCGTGGCCACCTTTGTCATCCAGGAGGAGTTCGACCGCTTCACTGGGTGCTGGTG
GTGCCCCACGGCCTCTTGGGAAGGCTCCGAAGGTCTCAAGACGCTGCGCATCCTATATGAGGAAGTGGAC
GAGTCTGAAGTGGAGGTCATTCATGTGCCCTCCCCCGCCCTGGAGGAGAGGAAGACGGACTCCTACCGCT
ACCCCAGGACAGGCAGCAAGAACCCCAAGATTGCCCTGAAGCTGGCTGAGCTCCAGACGGACCATCAGGG
CAAAATCGTGTCAAGCTGCGAGAAGGAACTGGTACAGCCATTCAGCTCCCTTTTCCCCAAAGTGGAGTAC
ATCGCCCGGGCTGGCTGGACACGGGACGGCAAATATGCCTGGGCCATGTTCCTGGACCGTCCCCAGCAAC
GGCTTCAGCTTGTCCTCCTGCCCCCTGCTCTCTTCATCCCGGCCGTTGAGAGTGAGGCCCAGCGGCAGGC
AGCTGCCAGAGCCGTCCCCAAGAATGTGCAGCCCTTTGTCATCTATGAAGAAGTCACCAATGTCTGGATC
AACGTCCACGACATCTTCCACCCGTTTCCTCAGGCTGAGGGCCAGCAGGACTTTTGTTTCCTTCGTGCCA
ACGAATGCAAGACTGGCTTCTGCCACCTGTACAGGGTCACAGTGGAACTTAAAACCAAGGACTATGACTG
GACGGAACCCCTCAGCCCTACAGAAGATGAGTTTAAGTGCCCCATCAAGGAGGAGGTCGCCCTGACCAGT
GGCGAGTGGGAGGTCTTGTCGAGGCATGGCTCCAAGATCTGGGTCAACGAGCAGACGAAGCTGGTGTACT
TTCAAGGTACAAAGGACACACCGCTGGAACATCACCTCTATGTGGTCAGCTACGAGTCAGCAGGCGAGAT
CGTGCGGCTCACCACGCTCGGCTTCTCCCACAGCTGCTCCATGAGCCAGAGCTTCGACATGTTCGTGAGT
CACTACAGCAGTGTGAGCACGCCACCCTGTGTACATGTGTACAAGCTGAGCGGCCCCGATGATGACCCAC
TGCACAAGCAACCACGCTTCTGGGCCAGCATGATGGAGGCAGCCAATTGCCCCCCAGACTATGTGCCCCC
TGAGATCTTCCACTTCCACACCCGTGCAGACGTGCAGCTCTACGGCATGATCTACAAGCCACACACCCTG
CAACCTGGGAGGAAGCACCCCACTGTGCTCTTTGTCTATGGGGGCCCACAGGTGCAGTTGGTGAACAACT
CCTTTAAGGGCATCAAATACCTGCGGCTAAATACACTGGCATCCTTGGGCTATGCTGTGGTGGTGATCGA
TGGTCGGGGCTCCTGTCAGCGGGGCCTGCACTTCGAGGGGGCCCTGAAAAATCAAATGGGCCAGGTGGAG
ATTGAGGACCAGGTGGAAGGCTTGCAGTACGTGGCTGAGAAGTATGGCTTCATTGACTTGAGCCGAGTCG
CCATCCATGGCTGGTCCTACGGCGGCTTCCTCTCACTCATGGGGCTCATCCACAAGCCACAAGTGTTCAA
GGTAGCCATTGCGGGCGCTCCTGTCACTGTGTGGATGGCCTATGACACAGGGTACACGGAACGATACATG
GATGTCCCCGAAAATAACCAGCAAGGCTATGAGGCAGGGTCTGTAGCCCTGCATGTGGAGAAGCTGCCCA
ATGAGCCTAACCGCCTGCTTATCCTCCACGGCTTCCTGGACGAGAACGTTCACTTCTTCCACACAAATTT
CCTGGTGTCCCAGCTGATCCGAGCAGGAAAGCCATACCAGCTTCAGATCTACCCAAACGAGAGACATAGC
ATCCGCTGCCGCGAGTCCGGAGAGCATTACGAGGTGACGCTGCTGCACTTTCTGCAGGAACACCTGTGA

Translation (862 aa):
MCSGVSPVEQVAAGDMDDTAARFCVQKHSWDGLRSIIHGSRKSSGLIVSKAPHDFQFVQKPDESGPHSHR
LYYLGMPYGSRENSLLYSEIPKKVRKEALLLLSWKQMLDHFQATPHHGVYSREEELLRERKRLGVFGITS
YDFHSESGLFLFQASNSLFHCRDGGKNGFMVSPMKPLEIKTQCSGPRMDPKICPADPAFFSFINNSDLWV
ANIETGEERRLTFCHQGSAGVLDNPKSAGVATFVIQEEFDRFTGCWWCPTASWEGSEGLKTLRILYEEVD
ESEVEVIHVPSPALEERKTDSYRYPRTGSKNPKIALKLAELQTDHQGKIVSSCEKELVQPFSSLFPKVEY
IARAGWTRDGKYAWAMFLDRPQQRLQLVLLPPALFIPAVESEAQRQAAARAVPKNVQPFVIYEEVTNVWI
NVHDIFHPFPQAEGQQDFCFLRANECKTGFCHLYRVTVELKTKDYDWTEPLSPTEDEFKCPIKEEVALTS
GEWEVLSRHGSKIWVNEQTKLVYFQGTKDTPLEHHLYVVSYESAGEIVRLTTLGFSHSCSMSQSFDMFVS
HYSSVSTPPCVHVYKLSGPDDDPLHKQPRFWASMMEAANCPPDYVPPEIFHFHTRADVQLYGMIYKPHTL
QPGRKHPTVLFVYGGPQVQLVNNSFKGIKYLRLNTLASLGYAVVVIDGRGSCQRGLHFEGALKNQMGQVE
IEDQVEGLQYVAEKYGFIDLSRVAIHGWSYGGFLSLMGLIHKPQVFKVAIAGAPVTVWMAYDTGYTERYM
DVPENNQQGYEAGSVALHVEKLPNEPNRLLILHGFLDENVHFFHTNFLVSQLIRAGKPYQLQIYPNERHS
IRCRESGEHYEVTLLHFLQEHL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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