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Report for CCDS37213.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37213.1 Public Mus musculus 15 Cela1 23 108 98 CCDS HistoryNCBI Gene:109901Re-query CCDS DB by CCDS ID:37213.1Re-query CCDS DB by GeneID:109901See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37213.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000023775.8 ENSMUSP00000023775.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000023775.8Link to Ensembl Protein Viewer:ENSMUSP00000023775.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000023775Re-query CCDS DB by Protein ID:ENSMUSP00000023775
Original member Current member NCBI NM_033612.2 NP_291090.2 Accepted alive Link to Nucleotide Sequence:NM_033612.2Link to Protein Sequence:NP_291090.2Re-query CCDS DB by Nucleotide ID:NM_033612Re-query CCDS DB by Protein ID:NP_291090Link to BLAST:NP_291090.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_291090.2 266 Q91X79 266 100% 0 0

Chromosomal Locations for CCDS 37213.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 100674700 100674717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 100675324 100675473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 100681143 100681288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 100682887 100683023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 100684580 100684705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 100685134 100685234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 100687125 100687207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 100687854 100687893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (801 nt):
ATGTTGCGCTTCCTGGTGTTTGCTTCCCTGGTCCTGTGTGGACACAGTACCGAGGACGTTCCGGAAACTG
ACGCCCGCGTGGTTGGAGGGGCTGAAGCCCGGAGGAACTCTTGGCCGTCTCAGATTTCCCTCCAGTACCA
GTATGGAGGATCATGGCACCACACCTGTGGAGGCACCCTCATCCGAAGCAACTGGGTGATGACCGCTGCT
CACTGTGTGGACAGCCCCATGACTTATCGAGTGGTTGTCGGAGAGCACAACCTGAGCCAGAATGACGGCA
CCGAGCAGTATGTGAACGTGCAGAAGATTGTGTCACACCCCTACTGGAACAAGAACAACGTGGTTGCAGG
CTATGACATCGCCCTGCTGCGCTTGGCCAAGAGTGTTACACTCAATAACTATGTCCAGCTGGGTGTTCTG
CCCCGGGAGGGAACCATCCTGGCTAACAACTCTCCCTGCTACATCACAGGCTGGGGAAGAACCAGAACCA
ATGGGGAGCTGGCCCAGACCCTGCAGCAGGCATACCTGCCCAGCGTGTCCTATAGCATCTGCTCCAGCTC
CTCTTACTGGGGCTCCTCTGTGAAGAATACCATGGTGTGCGCTGGTGGAGATGGAGTCCGCTCTGGATGC
CAGGGTGATTCTGGGGGACCCCTCCACTGCATGGTGAACGGTCAGTATGCTGTCCACGGAGTGACCAGCT
TTGTGTCCAGCATGGGCTGTAATGTCGCCAGGAAGCCCACCGTCTTCACCAGAGTCTCTGCTTACATTTC
CTGGATGAATAATGTCATTGCCTCCAACTGA

Translation (266 aa):
MLRFLVFASLVLCGHSTEDVPETDARVVGGAEARRNSWPSQISLQYQYGGSWHHTCGGTLIRSNWVMTAA
HCVDSPMTYRVVVGEHNLSQNDGTEQYVNVQKIVSHPYWNKNNVVAGYDIALLRLAKSVTLNNYVQLGVL
PREGTILANNSPCYITGWGRTRTNGELAQTLQQAYLPSVSYSICSSSSYWGSSVKNTMVCAGGDGVRSGC
QGDSGGPLHCMVNGQYAVHGVTSFVSSMGCNVARKPTVFTRVSAYISWMNNVIASN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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