NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS37124.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37124.1 Public Mus musculus 15 Zfp7 23 108 98 CCDS HistoryNCBI Gene:223669Re-query CCDS DB by CCDS ID:37124.1Re-query CCDS DB by GeneID:223669See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37124.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000023179.6 ENSMUSP00000023179.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000023179.6Link to Ensembl Protein Viewer:ENSMUSP00000023179.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000023179Re-query CCDS DB by Protein ID:ENSMUSP00000023179
Original member Current member EBI ENSMUST00000230106.1 ENSMUSP00000155599.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000230106.1Link to Ensembl Protein Viewer:ENSMUSP00000155599.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000230106Re-query CCDS DB by Protein ID:ENSMUSP00000155599
Original member NCBI NM_001358816.1 NP_001345745.1 Updated not alive Link to Nucleotide Sequence:NM_001358816.1Link to Protein Sequence:NP_001345745.1Re-query CCDS DB by Nucleotide ID:NM_001358816Re-query CCDS DB by Protein ID:NP_001345745
Current member NCBI NM_001358816.2 NP_001345745.1 Accepted alive Link to Nucleotide Sequence:NM_001358816.2Link to Protein Sequence:NP_001345745.1Re-query CCDS DB by Nucleotide ID:NM_001358816Re-query CCDS DB by Protein ID:NP_001345745Link to BLAST:NP_001345745.1
Original member NCBI NM_145916.3 NP_666021.2 Updated not alive Link to Nucleotide Sequence:NM_145916.3Link to Protein Sequence:NP_666021.2Re-query CCDS DB by Nucleotide ID:NM_145916Re-query CCDS DB by Protein ID:NP_666021
NCBI NM_145916.4 NP_666021.2 Updated not alive Link to Nucleotide Sequence:NM_145916.4Link to Protein Sequence:NP_666021.2Re-query CCDS DB by Nucleotide ID:NM_145916Re-query CCDS DB by Protein ID:NP_666021
Current member NCBI NM_145916.5 NP_666021.2 Accepted alive Link to Nucleotide Sequence:NM_145916.5Link to Protein Sequence:NP_666021.2Re-query CCDS DB by Nucleotide ID:NM_145916Re-query CCDS DB by Protein ID:NP_666021Link to BLAST:NP_666021.2

Chromosomal Locations for CCDS 37124.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 76880780 76880782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76881112 76881238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76888231 76888347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76890007 76891817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2058 nt):
ATGGAGGCGGTGACCTTTGGCGACGTGGCTGTGCACTTCTCTCGAGAGGAGTGGCAGTGTCTGGATTCTG
GTCAGAGGGCCCTCTACAAGGAGGTGATGCTGGAGAACCACAGCAGCGTGGCAGGACTAGCAGGATTCCT
GGTCTTTAAGCCGGAATTGATCTCCCGGCTGGAGCAAGGACAAGAGCCGTGGGTCCTTGATCTACAGGGA
GCAGAGGGGACAGAGGCACCAAGGATTTGCCAGACAGACTCCGCTATTAGAACTGATCGCAAGCAGACCT
GTGAGTACACGAGCCTCCTCCAAAGGCAGATTCCTGGCTTTGGAGACAATTTGGATTCTAAGGTCTGGTC
AGAGAATTGCCCAAGAAGCCTTGGGCTAAGCGTGAGTGGCTCACTTTTCCAGAAGCACCGTTTGAATAGC
GAGGCCGTGATGCCCAAGAACTCCACAAAGGATGCTGTCCAAGAACGTAAGGAGCTGCAGGCCACCGATG
TGGGTTATCGGCCTGATGACCAGAGAGACCACCTGAGCTCAAAACTGATTCGGCGTCAAAGCGTTCCTAC
CGGAGAGAACCGTTACCCATGTGAAGAGTGTGGCAAAGCTTTCAGGTGGCGCTCTCGCCTGAATCAGCAC
AAACTGAGCCACACTGGAGAGAAATCTTATCAGTGCAATAAGTGTACAAAAGTCTTCGCTTCTAGCTCGC
GACTGATTCGCCATCAGAGAGCTCACACCGGAGAAAAGCCGTTTAAATGTGACCAGTGTGGGAAGCGCTT
CGTCCTGGCCTCGGTACTCACTCAGCATCAGAGGATCCACACCGGAGAGAGGCCATTTAAATGTGCCGAG
TGCGGGAAAGGTTTCCACCTGAGCGCAAAGCTGGTTCAGCATCAAAGAATTCATACTGGAGAGAAGCCTT
ACCGATGTGAGGAGTGTGGGAAAACCTTTGGTCAGAGCTCAAGCCTTGTCCATCATCAGAGAATCCACAC
CGGAGAGAGGCCCTTCATTTGTCAAGAGTGCGGGAAAGCCTTCTGCCAGCGCTCACAGCTCAGCAGACAC
CGGAGGACGCACACTGGAGAGAGGCCCTACTCCTGCCAGGAGTGTGGCAAGGCCTTCTGCCAGAGAGCAA
CTCTAGCCCAGCATCAGAAGATGATGCATACAGCGGAGAAATCTCAAATGCCGAGAGCCTCAGAGAGCCC
AAGCCTTATTGCCTGTCAGGGAAATACCACTGAAGAGAAGCCATTTAAGTGTGAGCAGTGTGGCAAAGCT
TTCAGGTGGCTCTCTCGCCTGAATCAGCACCAGGTGGTCCATTCTGGAGAGAAACCTTACCAGTGCAACA
AGTGCTCGAAAGCCTTTGGCTGTACCTCACGACTGATTCGCCACCAGAGAACTCACACCGGAGAAAAGCC
CTTTAAATGTGACGAATGTGGCAAGCGCTTCGTCCAGAGCTCACACCTTATTCAGCATCAGCGAATCCAC
ACGGGAGAGAAGCCTTACGTGTGTGATGACTGTGGGAGAGCTTTTACCCAGAGCTCCAGCCTCATTTACC
ACCAGAGGATCCATAAGGGAGAGAAGCCATATAAATGCAGCCAGTGTGGCAAAGCCTTCAGCATGAGCAC
ACAGCTCACCAGCCATCAGAGGACTCACACCGGGGAGAGACCTTATACGTGTAACGAGTGTGGGAAGACC
TTCCGTCAAAACTCAACCCTTTTCCAACACCAGATAATTCATGTTAGAGTAAAGCCCTATGAGTGTAATG
AGTGTGGAAAGGCCTTCAGCCGGAGCTCATACCTTATTGAACACCAGAGAATACACACTAGAGCCCAGGG
GGGCCATGAATTTGGGGACACCCCTGAAAGTCCCACCGTTTTGAACCATAAAAAAGTGCACACTGTAAAA
AAGTTGTACCAGTGTGACGACTGCGATAAGGTCTTCAGGTGGCGTTCGTACCTGATTATCCACCAGCGGA
TTCACACAGGAGAGAGGCCTTATAAATGTAATGCCTGTGGCAAGGCTTTTCATCAGATCGCAAAGCTCAC
TCAGCACCAAAAACTTCACATGAGATAA

Translation (685 aa):
MEAVTFGDVAVHFSREEWQCLDSGQRALYKEVMLENHSSVAGLAGFLVFKPELISRLEQGQEPWVLDLQG
AEGTEAPRICQTDSAIRTDRKQTCEYTSLLQRQIPGFGDNLDSKVWSENCPRSLGLSVSGSLFQKHRLNS
EAVMPKNSTKDAVQERKELQATDVGYRPDDQRDHLSSKLIRRQSVPTGENRYPCEECGKAFRWRSRLNQH
KLSHTGEKSYQCNKCTKVFASSSRLIRHQRAHTGEKPFKCDQCGKRFVLASVLTQHQRIHTGERPFKCAE
CGKGFHLSAKLVQHQRIHTGEKPYRCEECGKTFGQSSSLVHHQRIHTGERPFICQECGKAFCQRSQLSRH
RRTHTGERPYSCQECGKAFCQRATLAQHQKMMHTAEKSQMPRASESPSLIACQGNTTEEKPFKCEQCGKA
FRWLSRLNQHQVVHSGEKPYQCNKCSKAFGCTSRLIRHQRTHTGEKPFKCDECGKRFVQSSHLIQHQRIH
TGEKPYVCDDCGRAFTQSSSLIYHQRIHKGEKPYKCSQCGKAFSMSTQLTSHQRTHTGERPYTCNECGKT
FRQNSTLFQHQIIHVRVKPYECNECGKAFSRSSYLIEHQRIHTRAQGGHEFGDTPESPTVLNHKKVHTVK
KLYQCDDCDKVFRWRSYLIIHQRIHTGERPYKCNACGKAFHQIAKLTQHQKLHMR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH