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Report for CCDS37090.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37090.1 Public Mus musculus 15 Tmem71 23 108 98 CCDS HistoryNCBI Gene:213068Re-query CCDS DB by CCDS ID:37090.1Re-query CCDS DB by GeneID:213068See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 37090.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000048372.6 ENSMUSP00000044493.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000048372.6Link to Ensembl Protein Viewer:ENSMUSP00000044493.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000048372Re-query CCDS DB by Protein ID:ENSMUSP00000044493
Original member Current member NCBI NM_172514.3 NP_766102.1 Accepted alive Link to Nucleotide Sequence:NM_172514.3Link to Protein Sequence:NP_766102.1Re-query CCDS DB by Nucleotide ID:NM_172514Re-query CCDS DB by Protein ID:NP_766102Link to BLAST:NP_766102.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766102.1 287 Q149F5 287 99.6516% 0 1

Chromosomal Locations for CCDS 37090.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 66527919 66527934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66532589 66532649 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66532751 66532812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66538797 66538872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66541573 66541758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66551953 66552101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66555031 66555243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66557745 66557805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66559280 66559319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (864 nt):
ATGTACCGAGACTCTCCACTGATGTCGACACCAGTAGCAAATGACTCCAGGTCAGACGAAGGACCTTCTG
GAAAGCTGTCTCCGACATGCCTTTTCCCAAGCTTTACTTGTGACTTCCTGGATGGAGACAGTTCTTTTGA
ATGCTGCTCCATAGACCCCCTGACAGGCTCCCACTATATCTGCCGCAGAAGCCCCCGACTCCTCACCAAT
GGCTACTACATTTGGACTGAGGACAGTTTCTTCTGTGACCCAGATGGCCACATCACACTGAACCCCTCCC
AAACCAGTGTGATGTACAAGGAGAACTTAGTTAGAATATTTAGAAAGAAAAAGAGAACTCACCGTTCTCT
TTCTTCTCTCTTGGACCCCCGAGCCTCTAAGTCTTGGCTGCATGGAAGTATCTTTGGAGAAGTTGACTCA
CTCCCAAGTGAGGATCTCTGGCTGGATGGAATCAGGAGCCTTGGAAGTGATCTAGACTGTTCTCTGAGTG
ATGGCTGGGAGTCTCAGAAGCCAGTCACAGACACTTCAGAATCCTCCTCTTCTGGCTACATCCTGCCTCA
GTCTCTCAGAGAAAGCTCCCAAAGTTCCTCTCTTCAACTTCAGGTGAAAGCATCAGGGCACTTCGAAAAG
AACAGTTTGGATCATTCAAGAGCTGGTTTGATGCATAAGGTCTCCTTTCAGGCAATCCTCCTAGCAGTGT
GCTTAGTCATTTCTGCATACACAAGGTGGTTTGTGGGAGGAGAATTAGCCAGCATCTTTACATGTGCATT
GCTGATCACAATAGCTTATGTTGTGAAATCACTGTTTCTCAACCTTGCCCGCTATTTCAAAGCCACCTCC
TGTGCTAGATTTGACAGCACTTGA

Translation (287 aa):
MYRDSPLMSTPVANDSRSDEGPSGKLSPTCLFPSFTCDFLDGDSSFECCSIDPLTGSHYICRRSPRLLTN
GYYIWTEDSFFCDPDGHITLNPSQTSVMYKENLVRIFRKKKRTHRSLSSLLDPRASKSWLHGSIFGEVDS
LPSEDLWLDGIRSLGSDLDCSLSDGWESQKPVTDTSESSSSGYILPQSLRESSQSSSLQLQVKASGHFEK
NSLDHSRAGLMHKVSFQAILLAVCLVISAYTRWFVGGELASIFTCALLITIAYVVKSLFLNLARYFKATS
CARFDST


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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