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Report for CCDS36965.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36965.1 Public Mus musculus 14 Adam28 23 108 98 CCDS HistoryNCBI Gene:13522Re-query CCDS DB by CCDS ID:36965.1Re-query CCDS DB by GeneID:13522See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36965.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022642.5 ENSMUSP00000022642.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022642.5Link to Ensembl Protein Viewer:ENSMUSP00000022642.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000022642Re-query CCDS DB by Protein ID:ENSMUSP00000022642
Original member Current member NCBI NM_010082.2 NP_034212.1 Accepted alive Link to Nucleotide Sequence:NM_010082.2Link to Protein Sequence:NP_034212.1Re-query CCDS DB by Nucleotide ID:NM_010082Re-query CCDS DB by Protein ID:NP_034212Link to BLAST:NP_034212.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034212.1 793 Q9JLN6-1 793 100% 0 0

Chromosomal Locations for CCDS 36965.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 68607455 68607533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 68607917 68607963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 68609107 68609175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 68609858 68609936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 68610898 68611006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 68617692 68617770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 68618095 68618175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 68619717 68619876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 68622084 68622186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 68626777 68626972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 68629029 68629118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 68630605 68630782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 68633111 68633241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 68634811 68634895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 68637331 68637500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 68638062 68638133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 68639146 68639217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 68642016 68642208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 68644257 68644333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 68646836 68646914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 68647667 68647743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 68649408 68649511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 68655639 68655690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2382 nt):
ATGCAGCAATGGAGTCTTCTGGTAGTCTCTTTCCTTCTTTCTCCAGTTCCAGTAAGTGCAATAAAAGAAC
TCCCTAAAGCCAAGAAATATGAAGTGGTTTATCCCATAAGACTTCATCCATTGCGTAAAAGAGAGACCCA
AGAGCCAGAGCCAAAGGAAACATTTGAAACTGAGCTAAGGTACAAAATGACAGTAAATGGAAAGGTTGCT
GTGCTGTATCTGAAGAAGAACAACAAGCTCCTTGCGCCTGACTACTCGGAAACATACTATAATTCCAGTG
GAAACAAGGTCACCACAAGCCCGCAAATCATGGATAGCTGTTACTACCAAGGACACATCGTAAATGAGAA
AGTTTCTGCAGCCAGCATCAGCACCTGTCAAGGACTACGGGGTTACATCAGTCAAGGAGATGAAAAGTAT
TTTATCGAACCTTTGAGCTCGGAGAACTTGGATGAACAGGCACATGCACTCTTCAAGGACGACTCCAATG
AAGACCAGGAGAAGAGCAACTGTGGTGTGGATGATGCGCTATGGCTCCAAGGGCTGCATCAGGACGTGGC
CCTCCCTGCCACCAGGTTGATTAAGTTGAATGATGGGATGGTTCAAGAACCTAAGAAATACATAGAATAT
TATGTGGTCCTGGATAATGGTGAGTTTAAGAAATACAATAAAAATCTTGCTGAAATACGAAAGATAGTGC
TTGAGATGGCCAATTACATCAACATGCTTTACAATAAGCTTGATGCCCACGTGGCCTTAGTTGGAGTGGA
AATCTGGACCGATGGGGATAAAATAAAGATAACACCAGATGCCAACACCACCCTGGAAAACTTCTCTAAG
TGGAGGGGAAATGATCTGCTAAAACGAAAGCATCATGATATTGCCCAGCTAATCTCATCAACAGACTTTT
CTGGATCAACAGTGGGTCTAGCCTTCATGTCGTCGATGTGTTCACCTTACCATTCTGTTGGCATTGTTCA
GGACCACAGTAACTACCATCTTCGAGTCGCAGGAACAATGGCTCATGAAATGGGTCACAATCTTGGCATG
ATTCATGACTACTTGAGCTGCAAGTGTCCATCTGAAGTCTGTGTAATGGAGCAGTCACTAAGGTTCCATA
TGCCTACAGACTTCAGCTCCTGCAGTCGTGTCAATTACAAACAGTTTCTTGAAGAAAAATTATCGCATTG
CCTCTTTAATAGCCCATTGCCATCAGATATCATATCCACCCCAGTCTGTGGGAACCAGTTGTTGGAAATG
AATGAGGACTGTGACTGTGGCACACCCAAGGAGTGTACTAACAAATGCTGTGATGCAAGGACCTGTAAAA
TTAAAGCAGGTTTCCAGTGTGCCCTGGGGGAATGCTGTGAGAAATGCCAACTTAAAAAACCTGGGGTTGT
GTGCAGAGCAGCAAAAGATGAGTGTGATCTGCCTGAAGTGTGTGATGGTAAATCCAGCCACTGCCCAGGT
GACAGATTCAGAGTCAATGGCTCCCCTTGCCAAAATGGGCATGGTTACTGCTTGAAGGGCAAATGTCCCA
CCCTGCAGCAGCAGTGCATGGACATGTGGGGTCCAGGAACCAAGGTTGCAAATACATCATGTTACAAGCA
GAATGAAGGTGGGACAAAGTACGGATACTGTCATGTGGAGAATGGCACACACATGCCCTGCAAAGCAAAA
GATGCCATGTGTGGGAAATTGTTCTGTGAAGGCGGATCAGGTGATTTGCCCTGGAAAGGACTTACCATAT
CTTTCCTGACATGTAAATTATTTGATCCTGAAGACACAAGTCAAGGAGTAGACATGGTGGCCAATGGAAC
CAAGTGTGGAACTAACAAGGTGTGCATTAATGCTGAGTGTGTGGACATGGAGAAGACTTACAAGTCAGCC
AACTGCTCCTCAAAGTGCAAGGGGCACGCAGTGTGTGACCATGAGCTTCAGTGTCAGTGCAAGGAAGGAT
GGGCCCCTCCTGACTGCGAGAATTCAGCCACAGTCTTCCACTTCTCCATCGTGGTTGGCGTGCTTTTCCC
CCTAGCAGTCATATTTGTGGTGGTTGCTATAGTGATCCAGCGCCAAAGTGCCAGAAGGAAGCAGAGGAGA
GTTCAGAGGCTACCATCCACCAAGGATGCCAAGCTACACAATCAGAAGTGTAGACCCCAAAAGGTGAAGG
ATGTTCAACCCCAGGAGATGAGTCAGATGAAAAAGCTCCATGTGTCTGATCTGCCCTCTGAAGAGCCGGA
GCCTCCACCTGATGTCCTAATCACAAAGCCAAATTTCCCACCACCACCAATTCCTGTTTCCTTGACAGGA
AGAGCCAAAGTTCCTTTTGTCAAGACACCTCATCCTTTTAGTCAGCAAATAGGCCGCGTGTACCTGAAGT
AA

Translation (793 aa):
MQQWSLLVVSFLLSPVPVSAIKELPKAKKYEVVYPIRLHPLRKRETQEPEPKETFETELRYKMTVNGKVA
VLYLKKNNKLLAPDYSETYYNSSGNKVTTSPQIMDSCYYQGHIVNEKVSAASISTCQGLRGYISQGDEKY
FIEPLSSENLDEQAHALFKDDSNEDQEKSNCGVDDALWLQGLHQDVALPATRLIKLNDGMVQEPKKYIEY
YVVLDNGEFKKYNKNLAEIRKIVLEMANYINMLYNKLDAHVALVGVEIWTDGDKIKITPDANTTLENFSK
WRGNDLLKRKHHDIAQLISSTDFSGSTVGLAFMSSMCSPYHSVGIVQDHSNYHLRVAGTMAHEMGHNLGM
IHDYLSCKCPSEVCVMEQSLRFHMPTDFSSCSRVNYKQFLEEKLSHCLFNSPLPSDIISTPVCGNQLLEM
NEDCDCGTPKECTNKCCDARTCKIKAGFQCALGECCEKCQLKKPGVVCRAAKDECDLPEVCDGKSSHCPG
DRFRVNGSPCQNGHGYCLKGKCPTLQQQCMDMWGPGTKVANTSCYKQNEGGTKYGYCHVENGTHMPCKAK
DAMCGKLFCEGGSGDLPWKGLTISFLTCKLFDPEDTSQGVDMVANGTKCGTNKVCINAECVDMEKTYKSA
NCSSKCKGHAVCDHELQCQCKEGWAPPDCENSATVFHFSIVVGVLFPLAVIFVVVAIVIQRQSARRKQRR
VQRLPSTKDAKLHNQKCRPQKVKDVQPQEMSQMKKLHVSDLPSEEPEPPPDVLITKPNFPPPPIPVSLTG
RAKVPFVKTPHPFSQQIGRVYLK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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