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Report for CCDS36928.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36928.1 Public Mus musculus 14 Ngdn 23 108 98 CCDS HistoryNCBI Gene:68966Re-query CCDS DB by CCDS ID:36928.1Re-query CCDS DB by GeneID:68966See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36928.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022815.9 ENSMUSP00000022815.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022815.9Link to Ensembl Protein Viewer:ENSMUSP00000022815.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000022815Re-query CCDS DB by Protein ID:ENSMUSP00000022815
Original member Current member NCBI NM_026890.2 NP_081166.1 Accepted alive Link to Nucleotide Sequence:NM_026890.2Link to Protein Sequence:NP_081166.1Re-query CCDS DB by Nucleotide ID:NM_026890Re-query CCDS DB by Protein ID:NP_081166Link to BLAST:NP_081166.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081166.1 315 Q9DB96 315 100% 0 0

Chromosomal Locations for CCDS 36928.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 55015577 55015588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55016169 55016228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55017066 55017137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55021054 55021191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55021394 55021478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55021556 55021608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55021821 55021944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55022038 55022206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55023050 55023206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55023336 55023393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55023989 55024008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (948 nt):
ATGGCGGCTCCGGAGGTGCTGGAGTCAGACGTGTCAAGTTCGATAACACTTTTGAAAAACCTCCAGGAGC
AGGTGATGGCTGTCACTGCACAAATCCAAGCACTGACGACAAAAGTTCGAGCTGGAACGTATTCTACAGA
GAAGGGTCTGAGCTTCTTGGAAGTGAAAGACCAGCTGTTGCTCATGTACCTTATGGATCTGAGCCACCTC
ATCCTGGACAAGGCCTCTGGAGCATCTCTGCAGGGACACCCTGCAGTTTTGAGGCTGGTGGAGATTCGCA
CGGTTTTAGAAAAACTTCGTCCTTTGGACCAAAAACTGAAGTATCAAATTGACAAACTGGTCAAGACGGC
AGTGACAGGCAGCCTCAGTGAGAATGACCCGCTCCGTTTTAAGCCTCATCCCAGCAACATGGTGAGCAAG
TTGAGCTCTGAGGATGAGGAGGAAAGTGAAGCAGAAGAGGGCCAGTCTGAGGCCTCGGGGAAGAAATCGG
CAAAAGGCTCAGCTAAGAAATACGTCCCGCCACGCTTGGTTCCAGTACATTACGATGAGACTGAGGCTGA
GCGGGAGCAGAAGCGCCTGGAGAAAGCCAAGAGGCGGGCGCTGAGCAGCTCTGTCATCCGGGAGCTGAAG
GAGCAGTACTCAGACGCCCCAGAGGAAATCCGGGACGCTCGACACCCTCACGTCACTCGCCAGAGTCAGG
AGGATCAGCACAGGGTCAACTATGAAGAGAGCATGATGGTGCGCTTAAGTGTTAGCAAGCGAGAGAAAGG
ACTGCGAAGGCGAGCGAGCGCCATGAGCTCCCAGCTTCATTCCCTCACACACTTCAGTGACATCAGTGCT
CTGACAGGGGGCACTGCTCATCTCGATGAGGACCAGAATCCTGTTAAAAAGAGGAAGAAGCTACCTAAAA
AAGGCCGGAAGAAGAAAGGTTTTCGGAGGCGCTGGTGA

Translation (315 aa):
MAAPEVLESDVSSSITLLKNLQEQVMAVTAQIQALTTKVRAGTYSTEKGLSFLEVKDQLLLMYLMDLSHL
ILDKASGASLQGHPAVLRLVEIRTVLEKLRPLDQKLKYQIDKLVKTAVTGSLSENDPLRFKPHPSNMVSK
LSSEDEEESEAEEGQSEASGKKSAKGSAKKYVPPRLVPVHYDETEAEREQKRLEKAKRRALSSSVIRELK
EQYSDAPEEIRDARHPHVTRQSQEDQHRVNYEESMMVRLSVSKREKGLRRRASAMSSQLHSLTHFSDISA
LTGGTAHLDEDQNPVKKRKKLPKKGRKKKGFRRRW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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