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Report for CCDS36913.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36913.1 Public Mus musculus 14 Mettl17 23 108 98 CCDS HistoryNCBI Gene:52535Re-query CCDS DB by CCDS ID:36913.1Re-query CCDS DB by GeneID:52535See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36913.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000047899.12 ENSMUSP00000047720.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000047899.12Link to Ensembl Protein Viewer:ENSMUSP00000047720.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000047899Re-query CCDS DB by Protein ID:ENSMUSP00000047720
Original member NCBI NM_001029990.1 NP_001025161.1 Updated not alive Link to Nucleotide Sequence:NM_001029990.1Link to Protein Sequence:NP_001025161.1Re-query CCDS DB by Nucleotide ID:NM_001029990Re-query CCDS DB by Protein ID:NP_001025161
Current member NCBI NM_001029990.2 NP_001025161.1 Accepted alive Link to Nucleotide Sequence:NM_001029990.2Link to Protein Sequence:NP_001025161.1Re-query CCDS DB by Nucleotide ID:NM_001029990Re-query CCDS DB by Protein ID:NP_001025161Link to BLAST:NP_001025161.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001025161.1 461 Q3U2U7 461 100% 0 0

Chromosomal Locations for CCDS 36913.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 51884946 51885023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 51885151 51885304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 51885388 51885522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 51886898 51886979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 51887223 51887304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 51887973 51888046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 51888742 51888836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 51889147 51889217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 51889528 51889635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 51889863 51889931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 51890678 51890728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 51891109 51891201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 51891367 51891551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 51891627 51891735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1386 nt):
ATGGCCACCGCCAGGACACCGAGATTTCTGCTGCTGTTCTGCAGATCCTGCCGCAGCCTTCGAGGACCCC
AGTCCCGAGCATACGCCGCCCTTGTGCCCGGTGTGTCCCAGGTAGACAACGGGTCGGATTTCCTGGGGAA
GAAGCCCCATCGAAAGCATCCCGGCATCCTGCATCTTCCGCACGTCCAGCTGCCGCAAGCACTGGCTGAC
GCCGCACAGTTAATGCTTTTTGAGAGACCCATGCGCAGTGTAGAGAAGCAGGTGCAAGCACTCACCAACT
ATCTCTGGAGCCGACATTTACCTGTAGAGCCGGAGGAGTTGCAAAGACGGGCTGCGTATCTTGAGAAAAA
ATTCCTGGAAAAACAAGACTCAGCTCCCACAGAGGAGAAACTTCGTGAGGCAGTACTGCATGCCCTGCGC
AAAACTACCTACCATTGGCAGGAACTCAGCTACAGTGAAGAGCTGAGTCTGATCTATATGGCAGCCAGAT
TGGACGGTGGTTTTGCTGCAGTTTTCAGGGCATTCCATGAGATCCAGGCTCGAATCCCAGAGTTTCGGCC
ACAGACGTTGATGGACTTTGGGTCTGGCACTGGTTCTGTCGCCTGGGCTGCCCACAGAACTTGGGGCCAG
AGCCTCCGTGAATACGTGTGTGTGGACAGTTCAGCTGCCATGTTGGGTTTGGCGGAGAAGCTTCTGAAAG
GTGGTTCAGAATCAGGGAAGCCCTGTATCCCAGGTGTCTTTTTCAGACAGTTTCTACCTGTGTCACCCAA
GGTCCAGTTTGATGTGGTGGTATCAGCCTACGCCCTCAGTGAACTACCCAGCAGGGCTGATCGCATTGAG
GTCATTCAGAACTTGTGGCGTAAGACAAGCCATTTTCTGGTATTGGTGGAGAACGGAACCAAAGCTGGGC
ACCGACTTCTCATGGATGCCAGGAACCTGGTCCTCGGGGAAAAAGAGAAGTCACCTTTGGACCTTCGACC
TAGCTTTGTCTTTGCCCCATGTCCCCATGAACTTCCCTGTCCTCAGCTGAATGCCTCCAAGTCCCTGGCC
TGTAGCTTCTCCCAGGCTTATCATCCAATCCCCTTTAACTGGAATAAGAAACCAAAGGAGGAAATATTCT
CTATGGTAATCCTTGCCAGAGGGTCTCCAAAGGAAGCTAACCGCTGGCCCCGAATCACGCAGCCCGTCCT
TAAACGGCCTCGCCATGTGCATTGCCACCTCTGTTGTCCAGACGGGCACATGCAGCACGCTGTGGTGACA
GCCCGTCGGCACGGCAGGGATTTGTACCGCTGTGCCCGTGTCAGCTCCTGGGGAGACCTTTTACCTGTGA
TCGCTCCATCCGAGTTTCCTCCTTCGTCCCCTGATGAAGAGCCCCCTGAGAATTGA

Translation (461 aa):
MATARTPRFLLLFCRSCRSLRGPQSRAYAALVPGVSQVDNGSDFLGKKPHRKHPGILHLPHVQLPQALAD
AAQLMLFERPMRSVEKQVQALTNYLWSRHLPVEPEELQRRAAYLEKKFLEKQDSAPTEEKLREAVLHALR
KTTYHWQELSYSEELSLIYMAARLDGGFAAVFRAFHEIQARIPEFRPQTLMDFGSGTGSVAWAAHRTWGQ
SLREYVCVDSSAAMLGLAEKLLKGGSESGKPCIPGVFFRQFLPVSPKVQFDVVVSAYALSELPSRADRIE
VIQNLWRKTSHFLVLVENGTKAGHRLLMDARNLVLGEKEKSPLDLRPSFVFAPCPHELPCPQLNASKSLA
CSFSQAYHPIPFNWNKKPKEEIFSMVILARGSPKEANRWPRITQPVLKRPRHVHCHLCCPDGHMQHAVVT
ARRHGRDLYRCARVSSWGDLLPVIAPSEFPPSSPDEEPPEN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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