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Report for CCDS36903.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36903.1 Public Mus musculus 14 Armh4 23 108 98 CCDS HistoryNCBI Gene:67419Re-query CCDS DB by CCDS ID:36903.1Re-query CCDS DB by GeneID:67419See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36903.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000036972.13 ENSMUSP00000036220.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000036972.13Link to Ensembl Protein Viewer:ENSMUSP00000036220.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000036972Re-query CCDS DB by Protein ID:ENSMUSP00000036220
Original member Current member NCBI NM_026142.5 NP_080418.2 Accepted alive Link to Nucleotide Sequence:NM_026142.5Link to Protein Sequence:NP_080418.2Re-query CCDS DB by Nucleotide ID:NM_026142Re-query CCDS DB by Protein ID:NP_080418Link to BLAST:NP_080418.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080418.2 775 Q8BT18 775 100% 0 0

Chromosomal Locations for CCDS 36903.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 49682348 49682416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 49682612 49682746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 49689267 49689298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 49751419 49751682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 49768409 49768600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 49770379 49770627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 49772862 49774239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 49783268 49783276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2328 nt):
ATGCTCCAGGACTCAATTACTGGAATTGTCAACTCCTTCAACCTGTTTTTCCCATCCACTATGAGCAGAC
CAACTCTGATGCCCACCTGTGTGGCTTTCTGTAGCATTCTCTTCCTCACCTTGGCTACAGGATGTCAAGC
TTTCCCAAAGGTGGAAAGGAGGGAGACAGCACAAGAATATGCAGAGAAAGAGCAGTCCCAGAAGATGAAC
ACTGATGACCAAGAAAACATCTCCTTTGCTCCAAAGTACATGCTGCAGCAGATGTCCTCTGAAGCTCCAA
TGGTACTATCTGAAGGACCTTCAGAGATACCATTAATTAAAGTATTCTCAGTCAACAAAGAGAGCCATCT
TCCAGGAGCTGGGCTTCTGCATCCTACCAGCCCTGGTGTTTACTCTTCCAGTGAGCCTGTGGTCTCAGCC
AGTGAACAAGAGCCTGGCCCCAGCCTGCTTGAAAGAATGTCTTCTGAGCACAGCCTTTCCAAGGTCATGT
TAACTGTTGCTGTATCTTCACCTGCTTCTCTGAATCCTGACCAGGAGGGACCCTATAACAGTTTGAGTAC
CCAGCCTATTGTAGCAGCAGTCACAGACGTAACACATGGTTCTCTGGATTATTTAGATAACCAGTTATTT
GCAGCTAAAAGTCAGGAAGCAGTTAGCTTAGGAAATTCACCTTCTTCCTCTATAAATACCAAAGAACCTG
AGATAATCAAAGCAGATGCAGCCATGGGAACTACTGTCGTTCCTGGTGTTGATTCTACAGGAGACATGGA
GCCTGATAGGGAGAGACCCTCAGAGATGGCAGCTGATGATGGCCAGAGCACTACCACCAAGTATTTGGTG
ACAATCCCCAATAATTTCCTGACTACTGAGCCAACAGCTGGCAGTATTTTGGGGGATGCTAAGGTCACAG
TGAGTGTCAGCACAGCTGGCCCAGTCTCTTCTATCTTCAATGAGGAGTGGGATGACACCAAATTTGAGAG
CATAAGTCGGGGGAGGCCCCCAGAGCCAGGAGACAATGCAGAGACTCAAATGAGAACAAAGCCACCACAT
GGGACCTATGAGAGCTTTGAGGGGACTGAGGAGAGCCCCTCTTCCACAGCAGTTTTAAAGGTGGCTCCAG
GGCACCTGGGAGGAGAACCAGCCTTGGGAACAGCCCTGGTGACTGCACTGGGGGATGAGAGGTCTCCAGT
CTTGACTCATCAGATTTCCTTCACTCCCATGAGTCTGGCAGAAGACCCTGAAGTTTCTACCATGAAGCTG
TTTCCAAGTGCAGGAGGCTTCAGAGCCTCCACCCAGGGGGACAGGACCCAGCTCTCCTCAGAGACTGCAT
TTTCTACCTCTCAATATGAGTCTGTGCCACAGCAGGAAGCAGGAAATGTGTTAAAAGACATCACTCAAGA
GAGAAAAATGGCTACTCAAGCAATGAACACTACATCACCTGTGGTGACACAAGAGCATATGGCCACCATC
GAGGTTCCCAGAGGCAGTGGGGAGCCTGAAGAAGGCATGCCATCCCTGTCTCCTGTGCCTGCTGAAGTGG
CTGATGCTGAGCTGTCCAGAAGAGGGGAGTCTCTGGCCACTCCAGCCTCCACCACTGTTGTCCCTTTGTC
TCTCAAACTTACCTCTTCCATGGAAGATCTCATGGACACAATCACTGGACCAAGTGAAGAATTCATACCA
GTATTGGGCTCTCCAATGGCACCCCCTGCAATGACTGTGGAGGCTCCCACAATTTCTTCAGCACTCCCTT
CTGAGGGAAGAACTAGTCCATCTATCAGCCGCCCAAATACAGCTGCCTCCTATGGCCTAGAACAACTTGA
ATCTGAAGAGGTAGAAGATGATGAGGATGAAGAGGATGAAGAAGATGAAGAGGAAGAAGAAGAAGATGAG
GAAGATGAAGAAGATGAGGAAGATAAAGAGACAGACTCCTTGTATAAAGACTTCGATGGTGATACTGAAC
CACCAGGGTTTACTCTGCCTGGCATCACGTCCCAGGAACCTGACATACGTTCAGGAAGCATGGACCTACT
AGAGGTAGCCACCTACCAGGTGCCAGAGACCATCGAGTGGGAACAGCAGAATCAAGGTCTGGTGAGAAGC
TGGATGGAAAAGCTAAAAGACAAGGCAGGCTACATGTCTGGAATGCTGGTGCCTGTTGGGGTAGGGATAG
CTGGAGCCTTGTTCATCTTGGGAGCGCTATACAGCATTAAGGTTATGAATCGCCGAAGAAGAAATGGATT
CAAAAGGCATAAAAGGAAGCAGAGAGAATTCAACAGTATGCAAGACAGAGTGATGCTGTTAGCTGATAGC
TCTGAAGACGAATTCTGA

Translation (775 aa):
MLQDSITGIVNSFNLFFPSTMSRPTLMPTCVAFCSILFLTLATGCQAFPKVERRETAQEYAEKEQSQKMN
TDDQENISFAPKYMLQQMSSEAPMVLSEGPSEIPLIKVFSVNKESHLPGAGLLHPTSPGVYSSSEPVVSA
SEQEPGPSLLERMSSEHSLSKVMLTVAVSSPASLNPDQEGPYNSLSTQPIVAAVTDVTHGSLDYLDNQLF
AAKSQEAVSLGNSPSSSINTKEPEIIKADAAMGTTVVPGVDSTGDMEPDRERPSEMAADDGQSTTTKYLV
TIPNNFLTTEPTAGSILGDAKVTVSVSTAGPVSSIFNEEWDDTKFESISRGRPPEPGDNAETQMRTKPPH
GTYESFEGTEESPSSTAVLKVAPGHLGGEPALGTALVTALGDERSPVLTHQISFTPMSLAEDPEVSTMKL
FPSAGGFRASTQGDRTQLSSETAFSTSQYESVPQQEAGNVLKDITQERKMATQAMNTTSPVVTQEHMATI
EVPRGSGEPEEGMPSLSPVPAEVADAELSRRGESLATPASTTVVPLSLKLTSSMEDLMDTITGPSEEFIP
VLGSPMAPPAMTVEAPTISSALPSEGRTSPSISRPNTAASYGLEQLESEEVEDDEDEEDEEDEEEEEEDE
EDEEDEEDKETDSLYKDFDGDTEPPGFTLPGITSQEPDIRSGSMDLLEVATYQVPETIEWEQQNQGLVRS
WMEKLKDKAGYMSGMLVPVGVGIAGALFILGALYSIKVMNRRRRNGFKRHKRKQREFNSMQDRVMLLADS
SEDEF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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