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Report for CCDS36639.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36639.1 Public Mus musculus 13 Elovl2 23 108 98 CCDS HistoryNCBI Gene:54326Re-query CCDS DB by CCDS ID:36639.1Re-query CCDS DB by GeneID:54326See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36639.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000021793.14 ENSMUSP00000021793.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000021793.14Link to Ensembl Protein Viewer:ENSMUSP00000021793.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000021793Re-query CCDS DB by Protein ID:ENSMUSP00000021793
Original member Current member NCBI NM_019423.2 NP_062296.1 Accepted alive Link to Nucleotide Sequence:NM_019423.2Link to Protein Sequence:NP_062296.1Re-query CCDS DB by Nucleotide ID:NM_019423Re-query CCDS DB by Protein ID:NP_062296Link to BLAST:NP_062296.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_062296.1 292 Q9JLJ4 292 100% 0 0

Chromosomal Locations for CCDS 36639.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 41185294 41185407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41186853 41186987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41187429 41187553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41189946 41190117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41191888 41191965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41194647 41194834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41197135 41197198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41220355 41220357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (879 nt):
ATGGAGCAGCTGAAGGCCTTTGATAATGAAGTCAATGCTTTCTTGGACAACATGTTTGGACCACGAGATT
CTCGAGTTCGCGGGTGGTTCCTGCTGGACTCTTACCTTCCCACCTTCATCCTCACCATCACGTACCTGCT
CTCGATATGGCTGGGTAACAAGTACATGAAGAACAGGCCTGCTCTGTCTCTCAGGGGCATCCTCACCTTG
TATAACCTCGCAATCACACTTCTTTCTGCGTATATGCTGGTGGAGCTCATCCTCTCCAGCTGGGAAGGAG
GTTACAACTTGCAGTGTCAGAATCTCGACAGTGCAGGAGAAGGTGATGTCCGGGTAGCCAAGGTCTTGTG
GTGGTACTACTTCTCCAAACTAGTGGAGTTCCTGGACACGATTTTCTTTGTTCTACGAAAAAAGACCAAT
CAGATCACCTTCCTTCATGTCTATCACCACGCGTCCATGTTCAACATCTGGTGGTGTGTTTTGAACTGGA
TACCTTGTGGTCAAAGCTTCTTTGGACCCACCCTGAACAGCTTTATCCACATTCTCATGTACTCCTACTA
CGGCCTGTCTGTGTTCCCGTCCATGCACAAGTACCTTTGGTGGAAGAAGTACCTCACACAGGCTCAGCTG
GTGCAGTTCGTACTCACCATCACGCACACGCTGAGTGCCGTGGTGAAGCCCTGTGGCTTCCCCTTTGGCT
GTCTCATCTTCCAGTCTTCCTATATGATGACGCTGGTCATCCTGTTCTTAAACTTCTATATTCAGACATA
CCGGAAAAAGCCAGTGAAGAAAGAGCTGCAAGAGAAAGAAGTGAAGAATGGTTTCCCCAAAGCCCACTTA
ATTGTGGCTAATGGCATGACGGACAAGAAGGCTCAATAA

Translation (292 aa):
MEQLKAFDNEVNAFLDNMFGPRDSRVRGWFLLDSYLPTFILTITYLLSIWLGNKYMKNRPALSLRGILTL
YNLAITLLSAYMLVELILSSWEGGYNLQCQNLDSAGEGDVRVAKVLWWYYFSKLVEFLDTIFFVLRKKTN
QITFLHVYHHASMFNIWWCVLNWIPCGQSFFGPTLNSFIHILMYSYYGLSVFPSMHKYLWWKKYLTQAQL
VQFVLTITHTLSAVVKPCGFPFGCLIFQSSYMMTLVILFLNFYIQTYRKKPVKKELQEKEVKNGFPKAHL
IVANGMTDKKAQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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