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Report for CCDS36598.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36598.1 Public Mus musculus 13 Gng4 23 108 98 CCDS HistoryNCBI Gene:14706Re-query CCDS DB by CCDS ID:36598.1Re-query CCDS DB by GeneID:14706See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36598.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000021734.8 ENSMUSP00000021734.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000021734.8Link to Ensembl Protein Viewer:ENSMUSP00000021734.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000021734Re-query CCDS DB by Protein ID:ENSMUSP00000021734
Original member Current member NCBI NM_001302997.1 NP_001289926.1 Accepted alive Link to Nucleotide Sequence:NM_001302997.1Link to Protein Sequence:NP_001289926.1Re-query CCDS DB by Nucleotide ID:NM_001302997Re-query CCDS DB by Protein ID:NP_001289926Link to BLAST:NP_001289926.1
Original member Current member NCBI NM_010317.3 NP_034447.1 Accepted alive Link to Nucleotide Sequence:NM_010317.3Link to Protein Sequence:NP_034447.1Re-query CCDS DB by Nucleotide ID:NM_010317Re-query CCDS DB by Protein ID:NP_034447Link to BLAST:NP_034447.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001289926.1 75 P50153 75 100% 0 0
NP_034447.1 75 P50153 75 100% 0 0

Chromosomal Locations for CCDS 36598.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 13806072 13806170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 13825247 13825375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (228 nt):
ATGAAGGAAGGCATGTCTAATAACAGCACCACCAGCATCTCCCAGGCCAGGAAAGCCGTGGAGCAGCTGA
AGATGGAAGCCTGCATGGACAGGGTGAAGGTCTCCCAGGCTGCCTCAGACCTCCTGGCCTACTGTGAAGC
CCACGTGCGGGAGGACCCCCTCATCATCCCAGTGCCTGCCTCAGAAAACCCCTTCCGGGAGAAGAAGTTC
TTCTGCACCATCCTCTAA

Translation (75 aa):
MKEGMSNNSTTSISQARKAVEQLKMEACMDRVKVSQAASDLLAYCEAHVREDPLIIPVPASENPFREKKF
FCTIL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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