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Report for CCDS35966.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35966.1 Public Mus musculus 10 Plpp2 23 108 98 CCDS HistoryNCBI Gene:50784Re-query CCDS DB by CCDS ID:35966.1Re-query CCDS DB by GeneID:50784See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35966.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000063879.12 ENSMUSP00000069670.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000063879.12Link to Ensembl Protein Viewer:ENSMUSP00000069670.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000063879Re-query CCDS DB by Protein ID:ENSMUSP00000069670
Original member Current member NCBI NM_015817.3 NP_056632.2 Accepted alive Link to Nucleotide Sequence:NM_015817.3Link to Protein Sequence:NP_056632.2Re-query CCDS DB by Nucleotide ID:NM_015817Re-query CCDS DB by Protein ID:NP_056632Link to BLAST:NP_056632.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056632.2 276 Q9DAX2-1 276 100% 0 0

Chromosomal Locations for CCDS 35966.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 79527132 79527248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 79527450 79527626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 79527815 79527872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 79530498 79530772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 79530877 79531028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 79533624 79533675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (831 nt):
ATGGAGCGGAGGTGGGTCTTCGTGCTGCTGGACGTGCTGTGCGTGTTGGTCGCCTCTCTGCCTTTCATCA
TCCTGACCCTGGTGAATGCACCATATAAGCGGGGGTTCTACTGTGGAGATGACTCCATCCGGTACCCATA
CCGTCCAGACACGATCACCCACGGACTCATGGCTGGGGTCATCATCACAGCTACTGTCATCCTTGTCTCA
TTGGGAGAAGCCTACCTGGTGTACACAGACCGTCTTTATTCGCGATCCAACTTCAACAACTATGTAGCTG
CCATCTACAAGGTGCTGGGAACCTTTCTGTTCGGGGCTGCTGTGAGCCAGTCTCTCACCGACCTGGCCAA
GTACATGATTGGCCGTCTTCGACCCAGTTTCTTGGCTGTCTGTGACCCTGACTGGAGCCAGGTCAACTGT
TCTGGCTATGTGCAGCTGGAGGTGTGCAGGGGCAGCCCTGCTAATGTCACGGAGGCCAGGCTGTCCTTCT
ACTCTGGCCACTCCTCCTTTGGCATGTATTGCATGTTGTTCCTGGCGCTATATGTGCAGGCCCGGCTCTG
CTGGAAGTGGGCACGGCTGCTGAGGCCCACTGTTCAGTTCTTCTTGGTGGCCTTTGCAATCTATGTGGGC
TATACCCGAGTGTCTGACCACAAGCACCACTGGAGTGATGTCCTTGTCGGCCTCCTGCAGGGAGCCCTGG
TGGCCTGCCTCACGGTCCGCTATGTTTCAGATTTCTTCAAATCCCGGCCACCCCAGCCCTGCCAGGAGGA
TGAAGTGCCGGAGCGCAAGCCCAGTCTGTCACTGACGCTGACCCTTGGTGACCGACCCTAG

Translation (276 aa):
MERRWVFVLLDVLCVLVASLPFIILTLVNAPYKRGFYCGDDSIRYPYRPDTITHGLMAGVIITATVILVS
LGEAYLVYTDRLYSRSNFNNYVAAIYKVLGTFLFGAAVSQSLTDLAKYMIGRLRPSFLAVCDPDWSQVNC
SGYVQLEVCRGSPANVTEARLSFYSGHSSFGMYCMLFLALYVQARLCWKWARLLRPTVQFFLVAFAIYVG
YTRVSDHKHHWSDVLVGLLQGALVACLTVRYVSDFFKSRPPQPCQEDEVPERKPSLSLTLTLGDRP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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