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Report for CCDS35847.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35847.1 Public Mus musculus 10 Adat2 23 108 98 CCDS HistoryNCBI Gene:66757Re-query CCDS DB by CCDS ID:35847.1Re-query CCDS DB by GeneID:66757See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35847.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000019944.8 ENSMUSP00000019944.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000019944.8Link to Ensembl Protein Viewer:ENSMUSP00000019944.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000019944Re-query CCDS DB by Protein ID:ENSMUSP00000019944
Original member Current member NCBI NM_025748.4 NP_080024.3 Accepted alive Link to Nucleotide Sequence:NM_025748.4Link to Protein Sequence:NP_080024.3Re-query CCDS DB by Nucleotide ID:NM_025748Re-query CCDS DB by Protein ID:NP_080024Link to BLAST:NP_080024.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080024.3 191 Q6P6J0 191 100% 0 0

Chromosomal Locations for CCDS 35847.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 13553266 13553361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13556852 13556956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13560114 13560264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13561704 13561810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13562637 13562709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13562815 13562858 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (576 nt):
ATGGAGGAGAAGGTGGAGTCCACCACTACTCCAGACGGCCCGTGCGTGGTGTCCGTACAGGAGACGGAAA
AGTGGATGGAGGAGGCGATGCGAATGGCCAAAGAAGCTTTGGAAAATATTGAAGTTCCTGTTGGCTGCCT
TATGGTCTATAACAATGAAGTTGTGGGGAAGGGAAGAAATGAAGTGAATCAGACAAAAAACGCTACTCGG
CATGCTGAAATGGTGGCCATTGATCAGGTCCTAGACTGGTGTCATCAGCATGGACAGAGCCCTTCCACTG
TATTCGAGCACACCGTGTTGTACGTCACTGTGGAGCCGTGCATCATGTGTGCTGCCGCCCTGCGCCTTAT
GAAAATCCCGCTGGTCGTCTATGGCTGTCAGAACGAACGGTTTGGTGGTTGCGGTTCCGTCCTAAACATT
GCCTCTGCTGACCTACCCAATACTGGAAGACCGTTTCAGTGCATCCCTGGGTACCGAGCTGAGGAGGCTG
TGGAGCTCCTAAAGACCTTCTACAAACAGGAGAACCCAAATGCGCCAAAATCAAAAGTTCGGAAAAAGGA
TTGTCAGAAATCCTGA

Translation (191 aa):
MEEKVESTTTPDGPCVVSVQETEKWMEEAMRMAKEALENIEVPVGCLMVYNNEVVGKGRNEVNQTKNATR
HAEMVAIDQVLDWCHQHGQSPSTVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNI
ASADLPNTGRPFQCIPGYRAEEAVELLKTFYKQENPNAPKSKVRKKDCQKS


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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