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Report for CCDS35518.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35518.1 Public Mus musculus 1 Tmem70 23 108 98 CCDS HistoryNCBI Gene:70397Re-query CCDS DB by CCDS ID:35518.1Re-query CCDS DB by GeneID:70397See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35518.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000177501.1 ENSMUSP00000135483.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000177501.1Link to Ensembl Protein Viewer:ENSMUSP00000135483.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000177501Re-query CCDS DB by Protein ID:ENSMUSP00000135483
Original member Current member NCBI NM_026392.1 NP_080668.1 Accepted alive Link to Nucleotide Sequence:NM_026392.1Link to Protein Sequence:NP_080668.1Re-query CCDS DB by Nucleotide ID:NM_026392Re-query CCDS DB by Protein ID:NP_080668Link to BLAST:NP_080668.1

Chromosomal Locations for CCDS 35518.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 16665308 16665505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 16667665 16667773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 16676968 16677425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (765 nt):
ATGCTGTTGGGGTTGGGCGGCCGGTGGGCAGCGGGCCTATGGCCGGGCCGGACGAGGACGACGTGGTGTG
TGGCCGCCGCGCTCCGAGGTTCCGGGATCGCTTTCTGGCGTGCGGCCTCGCTAGCCGAGCCAGAGCGGCT
CCGGAGCGGCGGGCATCTAGCGCTAGCCGAGTCTTGCGGGCCACCCGGGCGAGCGCAGCAGATACCTGTT
TGTTGGGAACAATGTGTCCGCTGCTTCCATACACAAGTTGATAAGCCAGAAAATGGCAGGCTGATTTATA
CTGGAAACCTGGCCCGAACGATATTTGGTGTGAAATGTTTCTCTTATTCTACAAGTGTTGTCAGCCTTGC
ATTCTTGCCGTACCTTCTCTCACAAAATAACATGATGTTTGGAAGTCTGCCTTTGCAAGTCTTATTTTAC
GGAGTCATGGGAAGCTTCACAGTGATCACTCCCACGCTGCTTCACCTTCTTACAAAAGGCTATGTCATTC
GGTTGTATCATGAAGCCACAAGTGACACTTACAGAGCTGTCACTTACAATGTTATGCTTTCGGAAACCAG
CACAGTGTTTCACCAAGACGACGTGACAATTCCAGAGAGCGCACATATATTCACCAGCTTTTATGCTAAA
ACAAAATCGCTATTAGTTAATCCAGCACTCTTTTTAAACCCTGAAGACTATAACCATCTAATGGGTTATG
ACAAACCGTTCACTTTTGATATGGAAGAAGTCGATGAAAAGAAACTGCATGAGGGTGAAAAATGA

Translation (254 aa):
MLLGLGGRWAAGLWPGRTRTTWCVAAALRGSGIAFWRAASLAEPERLRSGGHLALAESCGPPGRAQQIPV
CWEQCVRCFHTQVDKPENGRLIYTGNLARTIFGVKCFSYSTSVVSLAFLPYLLSQNNMMFGSLPLQVLFY
GVMGSFTVITPTLLHLLTKGYVIRLYHEATSDTYRAVTYNVMLSETSTVFHQDDVTIPESAHIFTSFYAK
TKSLLVNPALFLNPEDYNHLMGYDKPFTFDMEEVDEKKLHEGEK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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