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Report for CCDS35201.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35201.1 Public Homo sapiens X FRMPD4 24 110 108 CCDS HistoryNCBI Gene:9758Re-query CCDS DB by CCDS ID:35201.1Re-query CCDS DB by GeneID:9758See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35201.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000380682.5 ENSP00000370057.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000380682.5Link to Ensembl Protein Viewer:ENSP00000370057.1Re-query CCDS DB by Nucleotide ID:ENST00000380682Re-query CCDS DB by Protein ID:ENSP00000370057
Original member Current member NCBI NM_014728.3 NP_055543.2 Accepted alive Link to Nucleotide Sequence:NM_014728.3Link to Protein Sequence:NP_055543.2Re-query CCDS DB by Nucleotide ID:NM_014728Re-query CCDS DB by Protein ID:NP_055543Link to BLAST:NP_055543.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055543.2 1322 Q14CM0 1322 100% 0 0

Chromosomal Locations for CCDS 35201.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 12138972 12139012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 12498680 12498796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 12609721 12609881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 12614779 12614881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 12674863 12674908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 12683483 12683587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 12686097 12686204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 12690195 12690326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 12694335 12694454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 12701874 12702010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 12704359 12704485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 12706826 12706915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 12707469 12707651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 12710399 12710537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 12716069 12717133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 12717501 12718790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 12720529 12720533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3969 nt):
ATGGATGTCTTCAGCTTTGTGAAGATTGCAAAGCTTTCGAGCCACAGGACGAAGTCTTCAGGCTGGCCGC
CTCCCTCGGGAACCTGGGGCTTGAGCCAGGTGCCGCCCTATGGATGGGAGATGACGGCAAACCGAGATGG
GCGAGACTACTTCATCAATCACATGACACAGGCAATCCCTTTTGACGACCCTCGGTTAGAGAGCTGCCAA
ATCATCCCTCCGGCTCCTCGGAAGGTGGAGATGAGAAGGGACCCCGTGCTGGGATTTGGTTTTGTGGCAG
GCAGTGAAAAGCCAGTGGTCGTTCGCTCAGTAACACCAGGTGGCCCCTCTGAAGGCAAGCTGATCCCGGG
AGATCAGATTGTAATGATTAATGATGAACCGGTCAGCGCTGCACCCAGAGAGCGGGTCATCGATCTGGTC
AGAAGCTGCAAAGAATCGATACTCCTCACTGTCATTCAGCCTTACCCTTCTCCCAAATCAGCATTTATTA
GTGCTGCAAAAAAGGCAAGATTAAAGTCCAATCCTGTCAAAGTACGCTTCTCTGAGGAGGTCATCATCAA
CGGCCAAGTGTCGGAAACTGTTAAGGACAACTCACTTCTTTTTATGCCAAATGTTTTGAAAGTCTATCTG
GAAAATGGGCAGACCAAATCATTTCGTTTTGACTGCAGCACTTCCATTAAGGATGTCATCTTAACCCTTC
AAGAGAAGCTCTCCATCAAAGGCATTGAACACTTCTCTCTCATGCTGGAGCAGAGGACAGAAGGGGCTGG
AACGAAGCTGCTCTTGCTTCATGAACAGGAGACTCTAACTCAGGTGACACAGAGGCCCAGCTCCCATAAG
ATGAGATGTCTTTTCCGAATTAGCTTCGTCCCAAAAGATCCAATTGACCTTTTAAGGAGAGATCCAGTTG
CTTTCGAGTATCTCTATGTTCAGAGTTGTAACGATGTGGTTCAGGAGCGATTTGGGCCGGAGCTGAAATA
TGACATAGCCCTGCGGCTGGCCGCATTACAAATGTACATTGCAACCGTTACCACCAAGCAAACGCAGAAA
ATCTCCCTCAAATACATCGAAAAAGAATGGGGATTAGAGACTTTTCTTCCCTCTGCTGTGCTGCAAAGCA
TGAAAGAGAAGAACATAAAGAAAGCACTTTCACACCTTGTCAAAGCAAATCAAAACTTGGTACCACCGGG
TAAAAAGCTCTCTGCACTACAAGCCAAGGTCCATTATCTCAAGTTCCTCAGTGACCTACGATTGTATGGG
GGCCGTGTGTTCAAGGCAACATTAGTGCAGGCAGAAAAGCGCTCGGAAGTGACTCTCCTGGTTGGGCCCC
GGTATGGCATAAGCCATGTCATCAACACCAAAACCAATCTGGTGGCTCTTTTAGCCGACTTTAGCCACGT
CAACAGGATCGAAATGTTTTCCGAGGAGGAGAGCTTGGTGCGGGTAGAACTCCACGTGCTAGATGTGAAG
CCTATCACGCTTCTGATGGAATCCTCAGATGCCATGAACCTGGCCTGCTTGACGGCTGGATACTACCGGC
TGCTTGTTGATTCCAGGAGGTCGATATTTAACATGGCCAACAAGAAAAACACAGCGACCCAGGAAACAGG
ACCTGAAAACAAGGGGAAGCATAACCTCCTTGGCCCAGATTGGAACTGTATACCCCAAATGACCACCTTT
ATTGGCGAAGGGGAACAAGAAGCCCAGATAACATACATAGATTCAAAGCAGAAGACGGTGGAGATCACAG
ACAGCACCATGTGTCCAAAAGAGCACCGGCACTTGTACATAGACAATGCCTATAGTTCAGATGGACTTAA
CCAGCAGCTGAGCCAGCCCGGGGAGGCCCCCTGTGAGGCAGACTACAGAAGTCTAGCTCAGCGGTCCCTA
TTGACCCTCTCAGGACCAGAAACTCTGAAGAAAGCACAGGAATCTCCGAGAGGAGCTAAAGTGTCCTTTA
TTTTTGGAGACTTCGCCTTGGATGATGGTATTAGTCCCCCAACCCTTGGCTATGAAACGCTACTAGATGA
GGGTCCTGAAATGCTGGAGAAGCAGAGAAATCTCTACATTGGCAGTGCCAATGACATGAAGGGCCTGGAT
CTCACTCCAGAGGCAGAGGGCATCCAGTTTGTGGAAAATTCTGTTTATGCAAACATAGGCGATGTGAAGA
GCTTCCAGGCCGCGGAGGGGATCGAGGAACCCCTCTTGCATGACATCTGTTATGCAGAAAACACTGATGA
CGCGGAGGACGAGGACGAGGTGAGCTGCGAGGAGGACCTCGTGGTGGGGGAGATGAACCAGCCGGCCATC
CTCAACCTGTCTGGGTCAAGCGATGACATCATTGACCTCACATCCCTGCCCCCTCCAGAAGGTGATGACA
ATGAGGATGACTTCCTGTTGCGTTCCTTGAACATGGCCATTGCCGCACCCCCACCTGGCTTTAGAGACAG
TTCAGATGAAGAGGACTCTCAGAGCCAGGCAGCTTCCTTCCCCGAGGACAAGGAGAAAGGCAGCAGCCTG
CAAAATGATGAGATCCCCGTGTCCCTCATTGACGCTGTGCCCACCAGCGCCGAAGGCAAGTGTGAGAAGG
GACTGGATAATGCCGTCGTCTCCACGCTGGGAGCTCTAGAGGCTCTATCCGTGTCAGAAGAACAGCAGAC
CAGTGACAATTCAGGTGTAGCCATCTTGCGGGCTTATAGTCCTGAGTCTTCGTCAGACTCGGGCAATGAA
ACTAACTCTTCTGAAATGACTGAGAGTTCTGAACTGGCCACAGCACAAAAACAGTCAGAAAACCTCTCCC
GCATGTTCTTGGCCACTCACGAAGGCTACCACCCCCTTGCAGAAGAGCAGACCGAGTTCCCGGCCTCCAA
GACCCCCGCTGGGGGCTTGCCTCCAAAGTCCTCGCACGCCCTGGCTGCTAGGCCAGCAACCGACCTCCCG
CCCAAAGTTGTGCCTTCCAAGCAGTTACTTCACTCAGACCACATGGAGATGGAGCCTGAAACTATGGAGA
CTAAGTCGGTCACTGACTATTTTAGCAAACTGCACATGGGGTCGGTGGCATACTCCTGCACTAGCAAAAG
GAAAAGCAAGCTGGCCGATGGTGAGGGGAAGGCACCCCCTAATGGGAACACAACAGGAAAAAAACAGCAG
GGGACCAAAACGGCAGAGATGGAGGAGGAGGCCAGTGGTAAATTTGGTACTGTGTCTTCACGAGACAGTC
AACACCTGAGCACTTTTAATCTGGAGAGAACTGCCTTTCGCAAGGACAGTCAAAGATGGTATGTGGCCAC
TGAAGGTGGGATGGCTGAAAAAAGTGGATTAGAAGCAGCAACAGGGAAAACCTTTCCAAGAGCTTCTGGT
CTTGGGGCAAGGGAGGCCGAAGGGAAGGAAGAAGGAGCTCCTGATGGAGAAACCAGTGATGGCTCAGGAC
TTGGTCAAGGGGACCGCTTCTTAACTGACGTGACCTGTGCATCTTCAGCCAAAGACTTAGATAACCCAGA
GGACGCTGACTCGTCCACCTGCGACCATCCTTCCAAGCTTCCTGAGGCTGATGAGAGTGTGGCCCGCCTT
TGTGACTACCACTTGGCCAAGCGGATGTCATCACTGCAAAGCGAGGGCCATTTTTCTCTGCAGAGCTCCC
AAGGCTCTTCAGTGGATGCAGGCTGTGGCACAGGCAGCAGTGGCAGTGCCTGTGCCACACCCGTGGAGTC
GCCGCTCTGCCCCTCCCTGGGGAAGCACTTGATTCCTGACGCTTCTGGGAAAGGCGTGAATTACATTCCT
TCAGAGGAGAGAGCCCCTGGGCTTCCCAACCACGGAGCCACCTTTAAGGAACTGCACCCACAGACAGAAG
GGATGTGTCCACGGATGACAGTGCCTGCTCTGCACACAGCCATTAACACCGAACCCCTGTTTGGCACATT
GAGAGATGGATGCCATCGGCTCCCCAAGATTAAGGAAACCACAGTGTAG

Translation (1322 aa):
MDVFSFVKIAKLSSHRTKSSGWPPPSGTWGLSQVPPYGWEMTANRDGRDYFINHMTQAIPFDDPRLESCQ
IIPPAPRKVEMRRDPVLGFGFVAGSEKPVVVRSVTPGGPSEGKLIPGDQIVMINDEPVSAAPRERVIDLV
RSCKESILLTVIQPYPSPKSAFISAAKKARLKSNPVKVRFSEEVIINGQVSETVKDNSLLFMPNVLKVYL
ENGQTKSFRFDCSTSIKDVILTLQEKLSIKGIEHFSLMLEQRTEGAGTKLLLLHEQETLTQVTQRPSSHK
MRCLFRISFVPKDPIDLLRRDPVAFEYLYVQSCNDVVQERFGPELKYDIALRLAALQMYIATVTTKQTQK
ISLKYIEKEWGLETFLPSAVLQSMKEKNIKKALSHLVKANQNLVPPGKKLSALQAKVHYLKFLSDLRLYG
GRVFKATLVQAEKRSEVTLLVGPRYGISHVINTKTNLVALLADFSHVNRIEMFSEEESLVRVELHVLDVK
PITLLMESSDAMNLACLTAGYYRLLVDSRRSIFNMANKKNTATQETGPENKGKHNLLGPDWNCIPQMTTF
IGEGEQEAQITYIDSKQKTVEITDSTMCPKEHRHLYIDNAYSSDGLNQQLSQPGEAPCEADYRSLAQRSL
LTLSGPETLKKAQESPRGAKVSFIFGDFALDDGISPPTLGYETLLDEGPEMLEKQRNLYIGSANDMKGLD
LTPEAEGIQFVENSVYANIGDVKSFQAAEGIEEPLLHDICYAENTDDAEDEDEVSCEEDLVVGEMNQPAI
LNLSGSSDDIIDLTSLPPPEGDDNEDDFLLRSLNMAIAAPPPGFRDSSDEEDSQSQAASFPEDKEKGSSL
QNDEIPVSLIDAVPTSAEGKCEKGLDNAVVSTLGALEALSVSEEQQTSDNSGVAILRAYSPESSSDSGNE
TNSSEMTESSELATAQKQSENLSRMFLATHEGYHPLAEEQTEFPASKTPAGGLPPKSSHALAARPATDLP
PKVVPSKQLLHSDHMEMEPETMETKSVTDYFSKLHMGSVAYSCTSKRKSKLADGEGKAPPNGNTTGKKQQ
GTKTAEMEEEASGKFGTVSSRDSQHLSTFNLERTAFRKDSQRWYVATEGGMAEKSGLEAATGKTFPRASG
LGAREAEGKEEGAPDGETSDGSGLGQGDRFLTDVTCASSAKDLDNPEDADSSTCDHPSKLPEADESVARL
CDYHLAKRMSSLQSEGHFSLQSSQGSSVDAGCGTGSSGSACATPVESPLCPSLGKHLIPDASGKGVNYIP
SEERAPGLPNHGATFKELHPQTEGMCPRMTVPALHTAINTEPLFGTLRDGCHRLPKIKETTV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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