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Report for CCDS34709.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34709.1 Public Homo sapiens 7 SRRT 24 110 108 CCDS HistoryNCBI Gene:51593Re-query CCDS DB by CCDS ID:34709.1Re-query CCDS DB by GeneID:51593See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34709.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000611405.5 ENSP00000480421.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000611405.5Link to Ensembl Protein Viewer:ENSP00000480421.1Re-query CCDS DB by Nucleotide ID:ENST00000611405Re-query CCDS DB by Protein ID:ENSP00000480421
Original member Current member NCBI NM_015908.6 NP_056992.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015908.6Link to Protein Sequence:NP_056992.4Re-query CCDS DB by Nucleotide ID:NM_015908Re-query CCDS DB by Protein ID:NP_056992Link to BLAST:NP_056992.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056992.4 876 Q9BXP5-1 876 100% 0 0

Chromosomal Locations for CCDS 34709.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 100875591 100875712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100881285 100881413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100881659 100881805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100882053 100882241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100884070 100884239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100884368 100884552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100884740 100884838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100884923 100885040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100885213 100885370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100885701 100885762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100885863 100885941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100886247 100886435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100886795 100886968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100887047 100887200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100887320 100887513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100887703 100887859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100888042 100888143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100888257 100888383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100888474 100888549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2631 nt):
ATGGGTGACAGTGATGACGAGTACGATCGAAGGCGCAGGGACAAGTTCAGAAGAGAGCGCAGCGACTACG
ACCGTTCCCGCGAGAGAGATGAAAGACGTCGAGGGGACGATTGGAATGACAGAGAGTGGGACCGTGGCCG
TGAGCGCCGTAGTCGGGGTGAATATCGGGACTATGACCGGAATCGGCGAGAGCGCTTCTCGCCACCTCGC
CACGAACTCAGCCCGCCACAGAAGCGCATGAGGAGAGACTGGGATGAGCACAGCTCTGACCCATACCACA
GTGGCTATGAGATGCCCTATGCTGGGGGGGGTGGGGGCCCAACTTATGGCCCCCCTCAGCCCTGGGGCCA
CCCTGACGTCCACATCATGCAGCACCATGTCCTGCCTATCCAGGCCAGGCTGGGCAGCATTGCAGAGATT
GACCTGGGTGTGCCGCCGCCCGTGATGAAGACCTTCAAGGAGTTTCTCCTCTCCCTGGATGACTCGGTGG
ATGAGACGGAGGCCGTCAAGCGCTATAATGACTACAAGCTGGATTTCCGGAGGCAACAGATGCAGGATTT
CTTCCTGGCGCACAAAGATGAGGAGTGGTTTCGGTCTAAGTACCACCCAGATGAGGTGGGGAAGCGTCGG
CAGGAGGCCCGGGGGGCCCTGCAAAACCGACTGAGGGTCTTCCTGTCCCTCATGGAGACTGGCTGGTTTG
ATAACCTTCTCCTGGACATAGACAAAGCTGATGCCATTGTCAAGATGCTGGATGCAGCCGTGATTAAGAT
GGAAGGAGGCACGGAGAATGATCTTCGCATCCTGGAGCAGGAGGAGGAGGAGGAGCAGGCAGGAAAGCCT
GGGGAGCCCAGCAAGAAAGAAGAAGGACGGGCTGGAGCAGGCCTAGGGGACGGGGAGCGCAAAACCAACG
ACAAGGATGAGAAGAAGGAAGACGGCAAGCAGGCTGAGAATGACAGTTCTAATGATGACAAAACAAAGAA
GTCGGAGGGTGATGGGGACAAGGAAGAGAAGAAAGAAGACTCCGAGAAGGAAGCCAAAAAGAGTAGCAAG
AAGCGGAACCGGAAGCACAGTGGTGACGACAGCTTTGACGAGGGCAGCGTGTCAGAGTCTGAGTCGGAGT
CAGAGAGCGGCCAGGCTGAGGAGGAGAAGGAGGAGGCCGAAGAAGCGCTCAAGGAGAAGGAGAAGCCCAA
GGAAGAAGAATGGGAGAAGCCCAAGGACGCCGCGGGGCTGGAGTGCAAGCCGCGGCCGCTGCATAAGACC
TGCTCCCTCTTCATGCGCAACATCGCGCCCAACATCTCCCGGGCCGAGATCATCTCCCTTTGTAAAAGGT
ACCCAGGCTTTATGCGGGTGGCGCTCTCAGAGCCCCAGCCAGAGAGGAGGTTTTTCCGTCGTGGCTGGGT
GACCTTCGACCGCAGTGTTAACATTAAAGAGATCTGTTGGAACCTGCAGAACATCCGTCTCCGGGAGTGT
GAGCTGAGCCCTGGTGTGAACAGGGACCTGACCCGGCGCGTTCGCAACATCAACGGCATCACCCAGCACA
AGCAGATTGTGCGCAACGACATCAAGCTGGCGGCCAAGCTGATCCACACGCTGGATGACAGGACACAGCT
TTGGGCCTCAGAACCAGGGACGCCTCCCCTGCCCACGAGCCTGCCCTCGCAAAACCCGATCTTGAAGAAT
ATCACCGACTACCTGATCGAGGAAGTAAGCGCCGAGGAGGAGGAGCTGCTGGGGAGCAGCGGGGGCGCTC
CTCCTGAGGAGCCTCCTAAGGAAGGGAACCCGGCAGAGATCAACGTGGAGCGGGATGAGAAGTTGATTAA
GGTCTTGGACAAGCTCCTCCTTTACCTGCGCATCGTGCATTCCTTGGATTATTACAACACCTGTGAGTAC
CCCAACGAGGACGAGATGCCCAATCGCTGTGGGATCATCCACGTTCGGGGGCCCATGCCACCCAACCGCA
TCAGTCACGGGGAAGTGCTGGAGTGGCAGAAGACTTTTGAGGAGAAGCTCACGCCGTTGCTGAGTGTGCG
GGAGTCACTCTCAGAGGAAGAGGCCCAGAAGATGGGGCGCAAAGACCCAGAGCAGGAAGTGGAGAAGTTC
GTCACCTCCAACACGCAGGAACTGGGCAAGGATAAGTGGCTGTGTCCTCTCAGTGGCAAGAAATTCAAGG
GTCCTGAGTTTGTGCGCAAACATATCTTCAACAAGCATGCAGAGAAAATTGAGGAAGTGAAAAAGGAAGT
CGCGTTTTTTAACAACTTCCTCACTGATGCTAAGCGCCCAGCTCTGCCTGAGATCAAGCCAGCCCAGCCA
CCTGGCCCCGCCCAGATACTCCCCCCAGGTTTGACCCCAGGACTCCCCTACCCACACCAGACTCCCCAGG
GCCTGATGCCCTATGGTCAGCCCCGGCCCCCGATCTTGGGCTATGGAGCTGGTGCTGTCCGCCCTGCAGT
CCCCACAGGAGGCCCTCCATACCCCCATGCCCCGTATGGTGCTGGTCGAGGGAACTATGATGCCTTCCGA
GGCCAGGGAGGTTATCCTGGGAAACCTCGCAACAGGATGGTTCGTGGAGACCCAAGGGCCATTGTGGAAT
ATCGGGACCTGGATGCCCCAGACGATGTTGATTTCTTTTGA

Translation (876 aa):
MGDSDDEYDRRRRDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRERRSRGEYRDYDRNRRERFSPPR
HELSPPQKRMRRDWDEHSSDPYHSGYEMPYAGGGGGPTYGPPQPWGHPDVHIMQHHVLPIQARLGSIAEI
DLGVPPPVMKTFKEFLLSLDDSVDETEAVKRYNDYKLDFRRQQMQDFFLAHKDEEWFRSKYHPDEVGKRR
QEARGALQNRLRVFLSLMETGWFDNLLLDIDKADAIVKMLDAAVIKMEGGTENDLRILEQEEEEEQAGKP
GEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSK
KRNRKHSGDDSFDEGSVSESESESESGQAEEEKEEAEEALKEKEKPKEEEWEKPKDAAGLECKPRPLHKT
CSLFMRNIAPNISRAEIISLCKRYPGFMRVALSEPQPERRFFRRGWVTFDRSVNIKEICWNLQNIRLREC
ELSPGVNRDLTRRVRNINGITQHKQIVRNDIKLAAKLIHTLDDRTQLWASEPGTPPLPTSLPSQNPILKN
ITDYLIEEVSAEEEELLGSSGGAPPEEPPKEGNPAEINVERDEKLIKVLDKLLLYLRIVHSLDYYNTCEY
PNEDEMPNRCGIIHVRGPMPPNRISHGEVLEWQKTFEEKLTPLLSVRESLSEEEAQKMGRKDPEQEVEKF
VTSNTQELGKDKWLCPLSGKKFKGPEFVRKHIFNKHAEKIEEVKKEVAFFNNFLTDAKRPALPEIKPAQP
PGPAQILPPGLTPGLPYPHQTPQGLMPYGQPRPPILGYGAGAVRPAVPTGGPPYPHAPYGAGRGNYDAFR
GQGGYPGKPRNRMVRGDPRAIVEYRDLDAPDDVDFF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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