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Report for CCDS34109.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34109.2 Public Homo sapiens 4 WWC2 24 110 108 CCDS HistoryNCBI Gene:80014Re-query CCDS DB by CCDS ID:34109.2Re-query CCDS DB by GeneID:80014See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 34109.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000403733.8 ENSP00000384222.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000403733.8Link to Ensembl Protein Viewer:ENSP00000384222.3Re-query CCDS DB by Nucleotide ID:ENST00000403733Re-query CCDS DB by Protein ID:ENSP00000384222
Original member Current member NCBI NM_024949.6 NP_079225.5 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024949.6Link to Protein Sequence:NP_079225.5Re-query CCDS DB by Nucleotide ID:NM_024949Re-query CCDS DB by Protein ID:NP_079225Link to BLAST:NP_079225.5

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079225.5 1192 Q6AWC2-1 1192 100% 0 0

Chromosomal Locations for CCDS 34109.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 183099492 183099622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 183193599 183193708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 183207953 183208156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 183208949 183209025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 183240183 183240262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 183245416 183245545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 183248714 183248860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 183249920 183249993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 183253757 183253999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 183259639 183259728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 183260910 183261532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 183264978 183265107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 183265688 183265768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 183265865 183265951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 183268971 183269163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 183271080 183271241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 183280776 183280897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 183282708 183282906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 183284226 183284390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 183285967 183286059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 183289393 183289635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 183312341 183312468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 183315663 183315729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3579 nt):
ATGCCTAGGAGGGCCGGGAGCGGTCAGCTGCCGCTGCCCCGGGGCTGGGAGGAGGCCAGGGACTACGACG
GCAAGGTCTTCTACATTGACCACAACACCAGGAGGACCAGCTGGATCGACCCCCGGGACAGGTTAACGAA
GCCCTTGTCATTTGCTGATTGTGTTGGGGATGAGCTGCCGTGGGGATGGGAAGCAGGGTTTGACCCTCAG
ATTGGTGTCTACTACATCGATCACATCAACAAAACCACGCAGATAGAAGATCCAAGAAAACAATGGAGGG
GGGAACAGGAGAAGATGCTCAAGGACTACCTCTCTGTGGCACAGGATGCCCTCCGGACACAGAAGGAACT
GTACCATGTGAAGGAGCAGAGGCTGGCGCTGGCCCTGGATGAATACGTGCGATTAAATGATGCCTATAAG
GAAAAGTCAAGTTCTCACACAAGCTTATTCTCAGGATCTTCATCCAGTACTAAATATGATCCCGATATTT
TAAAAGCTGAGATCTCCACTACAAGATTAAGGGTTAAAAAGCTAAAGAGAGAGCTCTCACAGATGAAGCA
GGAACTGCTCTATAAAGAACAAGGCTTTGAAACATTGCAGCAAATTGATAAAAAAATGTCTGGAGGCCAG
AGCGGGTATGAACTCAGTGAAGCCAAAGCCATTCTAACAGAACTAAAATCTATCAGAAAGGCAATTAGCT
CAGGAGAAAAAGAAAAACAAGATCTGATGCAGAGTCTTGCTAAGCTGCAGGAGCGGTTTCATTTGGATCA
GAACATTGGCAGATCTGAGCCAGATTTGAGATGTAGTCCTGTGAACTCTCATTTATGTCTCTCCAGACAG
ACCCTTGATGCTGGGTCACAAACAAGCATTTCCGGAGATATTGGAGTAAGAAGTAGATCAAATTTAGCTG
AAAAGGTCAGGCTAAGCCTACAGTATGAAGAAGCCAAAAGAAGTATGGCCAACTTAAAAATTGAACTGTC
AAAATTGGACAGTGAGGCCTGGCCTGGGGCACTGGATATTGAGAAGGAAAAACTGATGCTGATTAATGAA
AAAGAAGAACTTTTGAAAGAGCTTCAGTTCGTCACCCCACAGAAACGTACCCAAGATGAATTAGAACGCC
TAGAAGCTGAAAGGCAGCGGCTGGAAGAAGAGTTGCTGTCTGTGAGGGGAACACCAAGCAGAGCTCTGGC
CGAGAGATTGAGATTGGAAGAGAGAAGAAAAGAGCTGCTACAGAAACTTGAAGAAACTACTAAATTAACT
ACTTATTTGCATTCACAACTTAAAAGCCTCTCTGCCAGCACCCTGTCCATGTCATCTGGGAGCAGCCTGG
GTTCCCTGGCATCGAGTCGGGGCTCTCTGAACACCTCCAGCAGAGGGTCACTCAACTCCCTCAGTTCCAC
CGAACTCTATTACAGCAGTCAAAGTGATCAGATAGATGTGGATTATCAGTATAAACTGGACTTCCTTCTG
CAAGAGAAAAGCGGTTACATTCCTTCTGGACCCATCACCACCATCCATGAAAACGAGGTGGTCAAGTCCC
CTAGCCAGCCTGGCCAGAGTGGACTCTGTGGAGTGGCAGCTGCAGCAACAGGCCACACTCCTCCACTGGC
TGAGGCCCCGAAGTCTGTGGCCTCCCTGTCCTCGAGGTCCTCCCTTTCCTCCTTGTCTCCTCCAGGCTCT
CCCTTGGTTTTGGAAGGCACGTTTCCCATGTCTTCTTCTCATGATGCCTCTCTCCATCAGTTCACTGCTG
ACTTTGAAGACTGTGAGTTGAGTAGCCATTTTGCAGATATCAGCCTCATCGAAAATCAGATTTTGCTGGA
TTCTGATTCAGGAGGAGCCTCCCAGTCTCTTTCAGAGGATAAAGACCTTAATGAATGTGCTAGGGAGCCA
TTATATGAAGGAACTGCAGATGTGGAAAAATCATTACCAAAAAGAAGAGTGATCCACTTGCTTGGGGAGA
AAACCACTTGTGTGTCGGCTGCTGTGTCTGATGAGTCTGTGGCTGGAGACAGTGGGGTCTATGAAGCTTT
CGTGAAACAACCTAGTGAAATGGAAGATGTCACATACAGTGAAGAGGATGTAGCCATTGTAGAGACCGCC
CAGGTTCAGATAGGACTCAGATACAATGCAAAAAGTTCAAGTTTCATGGTGATTATAGCACAGCTCCGAA
ACCTTCATGCCTTCTTGATACCTCATACTTCAAAAGTATATTTTAGGGTTGCCGTTCTTCCTTCCTCAAC
TGATGTCAGCTGTCTGTTTCGCACAAAAGTTCATCCGCCCACAGAATCCATTTTATTCAATGATGTGTTC
AGAGTCGCCATTTCCCAAACAGCCTTACAACAGAAGACACTGAGGGTAGACCTTTGCTCTGTCAGTAAAC
ACCGAAGGGAAGAATGCCTGGCTGGAACTCAGATCAGCCTGGCAGATTTACCATTTTCCAGTGAGGTTTT
CACTCTATGGTATAACTTGCTTCCTTCCAAGCAAATGCCTTGCAAAAAGAATGAAGAAAATGAGGACTCT
GTATTTCAACCAAACCAGCCGTTAGTAGATTCTATAGACTTGGATGCAGTGTCAGCCTTACTTGCAAGAA
CATCAGCTGAGTTGTTAGCTGTGGAACAAGAATTAGCACAAGAAGAAGAAGAAGAATCAGGACAAGAAGA
GCCAAGGGGCCCAGATGGAGACTGGCTAACAATGCTAAGAGAGGCCTCTGATGAAATTGTGGCTGAAAAA
GAGGCTGAAGTTAAATTGCCAGAGGACAGTAGCTGTACAGAAGATTTAAGTTCATGCACTAGTGTGCCTG
AGATGAATGAAGACGGGAACAGGAAAGAAAGCAACTGTGCCAAAGACCTCAGAAGTCAGCCACCTACTAG
AATACCAACACTGGTTGACAAAGAGACAAACACTGATGAAGCCGCTAATGACAATATGGCAGTTCGCCCC
AAAGAGCGCAGCAGCCTGAGCTCTAGACAGCATCCGTTTGTGAGGAGCAGTGTGATAGTGCGCTCACAGA
CCTTTTCTCCAGGAGAGCGGAACCAGTACATCTGCAGGTTAAATCGGAGTGACAGTGACAGTTCAACCCT
GGCTAAAAAATCACTGTTTGTGAGAAACTCCACCGAACGCCGCAGTTTGAGGGTCAAAAGGACGGTTTGC
CAGTCAGTCCTTAGAAGAACAACACAGGAATGCCCAGTGCGGACATCTCTAGACTTAGAACTGGACCTTC
AGGCATCTCTGACCCGGCAGAGCCGCCTCAATGATGAGCTGCAGGCGCTGAGGGACTTGCGGCAGAAGCT
GGAGGAACTGAAAGCTCAGGGAGAGACTGACCTTCCACCAGGCGTGCTGGAGGATGAGAGGTTCCAGAGG
CTTCTGAAGCAAGCTGAGAAGCAGGCTGAACAGTCCAAAGAAGAGCAGAAGCAAGGTCTGAATGCAGAGA
AGTTGATGAGGCAAGTCTCCAAGGACGTGTGTCGGCTCCGGGAGCAGAGCCAGAAGGTGCCTCGGCAGGT
GCAGTCCTTCAGGGAGAAGATTGCCTACTTCACCAGAGCAAAGATAAGCATCCCATCCCTGCCAGCTGAT
GATGTGTGA

Translation (1192 aa):
MPRRAGSGQLPLPRGWEEARDYDGKVFYIDHNTRRTSWIDPRDRLTKPLSFADCVGDELPWGWEAGFDPQ
IGVYYIDHINKTTQIEDPRKQWRGEQEKMLKDYLSVAQDALRTQKELYHVKEQRLALALDEYVRLNDAYK
EKSSSHTSLFSGSSSSTKYDPDILKAEISTTRLRVKKLKRELSQMKQELLYKEQGFETLQQIDKKMSGGQ
SGYELSEAKAILTELKSIRKAISSGEKEKQDLMQSLAKLQERFHLDQNIGRSEPDLRCSPVNSHLCLSRQ
TLDAGSQTSISGDIGVRSRSNLAEKVRLSLQYEEAKRSMANLKIELSKLDSEAWPGALDIEKEKLMLINE
KEELLKELQFVTPQKRTQDELERLEAERQRLEEELLSVRGTPSRALAERLRLEERRKELLQKLEETTKLT
TYLHSQLKSLSASTLSMSSGSSLGSLASSRGSLNTSSRGSLNSLSSTELYYSSQSDQIDVDYQYKLDFLL
QEKSGYIPSGPITTIHENEVVKSPSQPGQSGLCGVAAAATGHTPPLAEAPKSVASLSSRSSLSSLSPPGS
PLVLEGTFPMSSSHDASLHQFTADFEDCELSSHFADISLIENQILLDSDSGGASQSLSEDKDLNECAREP
LYEGTADVEKSLPKRRVIHLLGEKTTCVSAAVSDESVAGDSGVYEAFVKQPSEMEDVTYSEEDVAIVETA
QVQIGLRYNAKSSSFMVIIAQLRNLHAFLIPHTSKVYFRVAVLPSSTDVSCLFRTKVHPPTESILFNDVF
RVAISQTALQQKTLRVDLCSVSKHRREECLAGTQISLADLPFSSEVFTLWYNLLPSKQMPCKKNEENEDS
VFQPNQPLVDSIDLDAVSALLARTSAELLAVEQELAQEEEEESGQEEPRGPDGDWLTMLREASDEIVAEK
EAEVKLPEDSSCTEDLSSCTSVPEMNEDGNRKESNCAKDLRSQPPTRIPTLVDKETNTDEAANDNMAVRP
KERSSLSSRQHPFVRSSVIVRSQTFSPGERNQYICRLNRSDSDSSTLAKKSLFVRNSTERRSLRVKRTVC
QSVLRRTTQECPVRTSLDLELDLQASLTRQSRLNDELQALRDLRQKLEELKAQGETDLPPGVLEDERFQR
LLKQAEKQAEQSKEEQKQGLNAEKLMRQVSKDVCRLREQSQKVPRQVQSFREKIAYFTRAKISIPSLPAD
DV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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