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Report for CCDS34060.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34060.1 Public Homo sapiens 4 ANKRD50 24 110 108 CCDS HistoryNCBI Gene:57182Re-query CCDS DB by CCDS ID:34060.1Re-query CCDS DB by GeneID:57182See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34060.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000504087.6 ENSP00000425658.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000504087.6Link to Ensembl Protein Viewer:ENSP00000425658.1Re-query CCDS DB by Nucleotide ID:ENST00000504087Re-query CCDS DB by Protein ID:ENSP00000425658
Original member Current member NCBI NM_020337.3 NP_065070.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020337.3Link to Protein Sequence:NP_065070.1Re-query CCDS DB by Nucleotide ID:NM_020337Re-query CCDS DB by Protein ID:NP_065070Link to BLAST:NP_065070.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065070.1 1429 Q9ULJ7-1 1429 100% 0 0

Chromosomal Locations for CCDS 34060.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 124668987 124672534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 124678676 124678905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 124710000 124710511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4290 nt):
ATGACTAATCCTTGGGAAGAGAAAGTCTGCAAAATGGCTCAAACCAGTTTACTGCAAGGGAAGCAGTTTT
ACTGTAGGGAGTGGGTTTTCCACAAGCTTCAGCATTGCCTCCAGGAGAAAAGTAACTGCTGCAATAGTGC
TGTCAATGCACCATCACTTGTAATGAATTCTGGGAATAATGCTAGTGGTGTCTCTGGAAAGGGAGCTGCC
TGGGGTGTGTTGTTGGTAGGAGGGCCTGGCAGTGGCAAGACGGCCCTATGTACTGAACTCTTATGGCCAA
GTTCACCTGCAAGTTTGCAGAGAGGTTTACATCGCCAAGCTTTGGCCTTTCATTTCTGCAAAGCCCAGGA
CTCTGATACTTTGTGTGTTGGAGGGTTTATTAGAGGTCTAGTAGCCCAGATCTGCCGCAGTGGACTACTC
CAAGGATATGAGGACAAGCTAAGGGATCCAGCAGTCCAAAGCCTCTTACAGCCTGGGGAGTGCGAGAGAA
ACCCAGCCGAAGCATTTAAAAGGTGTGTTCTACTCCCTCTTCTGGGAATGAAGCCTCCCCAGCAAAGCCT
ATACCTGCTTGTTGATTCTGTTGATGAAGGGTGTAACATTACTGAAGGTGAACAAACGTCTACCAGCTTA
TCTGGGACTGTTGCAGCACTTTTAGCTGGTCACCATGAGTTCTTTCCACCATGGCTATTGCTTCTCTGTT
CTGCCCGAAAGCAGAGTAAGGCTGTTACTAAAATGTTTACTGGTTTTCGAAAAATAAGTTTAGATGACCT
TCGGAAGGCATATATCGTCAAGGATGTTCAGCAGTACATTCTTCATCGTTTAGATCAAGAAGAAGCTTTG
CGACAACACCTCACAAAAGAAACTGCAGAGATGTTAAATCAACTGCACATTAAAAGCAGTGGATGCTTTC
TTTACCTAGAACGAGTTTTAGATGGAGTTGTAGAAAATTTTATTATGTTAAGAGAAATTCGTGACATCCC
AGGAACTCTAAATGGTTTATATCTCTGGCTGTGCCAAAGACTTTTTGTAAGAAAACAATTTGCAAAGGTT
CAGCCTATTTTGAATGTGATTCTTGCAGCCTGCCGACCTTTGACCATAACGGAATTATATCACGCAGTAT
GGACCAAAAACATGTCGTTAACTTTGGAAGATTTTCAACGCAAGTTAGATATCCTCTCCAAACTTCTTGT
TGATGGACTAGGAAATACAAAAATACTGTTTCATTATAGTTTTGCCGAGTGGCTTCTGGATGTGAAACAC
TGTACTCAGAAGTATTTATGTAATGCAGCAGAAGGACACAGAATGTTGGCTATGAGTTATACCTGTCAAG
CCAAGAATTTAACACCATTGGAAGCACAAGAATTTGCATTGCACTTAATTAACTCAAACTTACAATTAGA
GACAGCGGAGTTAGCTCTGTGGATGATATGGAATGGTACACCTGTCAGAGATTCCCTTTCTACTTTGATA
CCCAAGGAACAAGAAGTGCTACAGCTGTTGGTTAAAGCTGGGGCTCATGTCAACAGTGAAGACGATCGCA
CATCATGCATAGTTCGACAAGCCTTAGAAAGAGAGGATTCCATTCGGACATTATTAGATAATGGAGCTTC
AGTAAATCAGTGTGATTCAAATGGGAGAACATTATTGGCTAATGCTGCATATAGTGGCAGTCTTGATGTA
GTCAATTTACTTGTCTCTAGGGGAGCAGATTTAGAGATAGAAGATGCTCATGGACATACACCACTCACTC
TAGCGGCTAGACAGGGACATACCAAGGTGGTTAATTGTTTGATTGGGTGTGGAGCAAATATTAATCATAC
TGATCAAGATGGTTGGACAGCATTAAGATCTGCTGCTTGGGGTGGCCATACTGAGGTAGTTTCTGCACTA
CTTTATGCTGGCGTAAAAGTGGATTGTGCAGATGCTGATAGCCGAACAGCTTTGAGAGCAGCAGCATGGG
GAGGACACGAGGATATTGTACTGAATTTGCTACAACATGGCGCTGAAGTGAACAAAGCTGATAATGAAGG
TAGAACTGCTTTGATAGCAGCAGCATACATGGGACATAGAGAGATTGTGGAACACCTACTGGACCATGGA
GCAGAAGTAAATCATGAGGATGTTGATGGCAGGACTGCACTCTCTGTAGCTGCACTTTGTGTGCCTGCAA
GTAAAGGGCACGCATCAGTTGTTAGCCTTTTAATTGATCGAGGTGCTGAAGTAGATCATTGTGATAAAGA
TGGCATGACTCCACTGCTGGTAGCTGCCTATGAAGGACATGTTGATGTGGTTGACTTGCTTCTAGAAGGG
GGAGCAGATGTAGATCACACAGATAACAATGGCCGTACACCCCTCTTAGCAGCAGCGTCTATGGGTCATG
CATCAGTTGTAAATACACTTTTGTTTTGGGGTGCAGCTGTGGATAGTATTGATAGTGAAGGTAGGACAGT
CCTCAGTATAGCTTCAGCACAAGGAAATGTTGAGGTGGTACGTACTCTACTGGATAGAGGGTTAGATGAA
AATCACAGAGATGATGCTGGATGGACACCTTTGCACATGGCAGCTTTTGAAGGGCACAGATTGATATGTG
AAGCACTTATTGAACAAGGTGCTAGAACAAATGAGATTGACAATGATGGACGAATCCCTTTCATATTAGC
TTCACAAGAGGGTCATTATGATTGTGTTCAAATATTACTGGAAAACAAATCCAACATTGATCAAAGAGGT
TATGATGGAAGAAATGCACTGCGGGTTGCTGCATTAGAAGGGCACAGGGACATTGTTGAATTGCTTTTTA
GCCATGGTGCTGATGTTAACTGCAAAGATGCTGATGGTCGGCCTACACTTTATATCTTGGCCTTAGAAAA
TCAGCTTACAATGGCCGAATATTTTTTAGAAAATGGTGCAAACGTAGAAGCAAGTGATGCTGAAGGAAGG
ACAGCACTTCATGTGTCTTGTTGGCAAGGCCATATGGAAATGGTGCAGGTCCTGATAGCATACCATGCTG
ACGTCAATGCTGCAGACAATGAAAAGCGCTCTGCTTTGCAGTCTGCAGCCTGGCAGGGCCATGTAAAAGT
GGTTCAGCTTCTGATTGAGCATGGTGCTGTAGTTGACCATACATGTAACCAAGGTGCAACTGCACTCTGT
ATTGCAGCCCAGGAAGGGCACATTGATGTTGTTCAGGTCTTATTAGAGCATGGTGCTGATCCAAACCATG
CTGATCAATTTGGACGCACTGCTATGCGTGTTGCAGCCAAAAATGGACATTCTCAGATAATTAAATTATT
AGAAAAATATGGTGCATCTAGTTTGAATGGCTGTTCCCCATCTCCTGTTCACACAATGGAGCAAAAACCT
CTACAGTCATTGTCTTCAAAAGTGCAGTCATTAACAATTAAATCAAATAGCTCTGGTAGTACTGGTGGAG
GGGATATGCAGCCTTCGTTACGTGGTTTACCTAATGGGCCTACTCATGCTTTTAGTTCTCCTTCAGAATC
TCCAGATTCTACAGTTGACCGGCAGAAGTCATCACTGTCAAATAATTCCCTGAAAAGCTCAAAAAATTCA
TCTTTGAGAACTACTTCATCTACAGCAACGGCTCAAACAGTGCCAATTGATAGCTTTCATAACTTGTCAT
TTACAGAACAAATTCAGCAGCATTCATTGCCACGCAGTAGAAGTCGACAGTCAATTGTTTCCCCATCTTC
CACAACACAGTCCTTAGGACAGAGTCATAATTCACCAAGTAGTGAATTTGAGTGGAGTCAAGTAAAGCCC
AGTTTGAAGTCAACTAAAGCAAGTAAAGGGGGGAAATCAGAAAATTCTGCCAAGTCTGGATCAGCTGGGA
AAAAAGCGAAACAAAGTAATTCTTCACAGCCAAAGGTTTTAGAATATGAAATGACTCAGTTTGATAGAAG
AGGACCTATAGCCAAATCCGGGACTGCTGCACCACCTAAACAAATGCCAGCAGAATCTCAATGCAAAATT
ATGATACCTTCAGCTCAGCAGGAAATTGGTCGATCTCAACAGCAGTTTCTTATTCACCAACAAAGTGGGG
AACAGAAGAAGAGAAATGGAATAATGACAAATCCAAATTATCATCTTCAGAGCAACCAGGTTTTTCTTGG
TAGGGTTTCAGTCCCACGAACAATGCAAGATAGAGGGCATCAGGAAGTGTTGGAGGGATACCCTTCCTCA
GAGACAGAATTAAGCCTTAAACAAGCTCTGAAGCTTCAGATTGAAGGTTCTGACCCTAGCTTCAACTATA
AAAAGGAAACACCATTATAA

Translation (1429 aa):
MTNPWEEKVCKMAQTSLLQGKQFYCREWVFHKLQHCLQEKSNCCNSAVNAPSLVMNSGNNASGVSGKGAA
WGVLLVGGPGSGKTALCTELLWPSSPASLQRGLHRQALAFHFCKAQDSDTLCVGGFIRGLVAQICRSGLL
QGYEDKLRDPAVQSLLQPGECERNPAEAFKRCVLLPLLGMKPPQQSLYLLVDSVDEGCNITEGEQTSTSL
SGTVAALLAGHHEFFPPWLLLLCSARKQSKAVTKMFTGFRKISLDDLRKAYIVKDVQQYILHRLDQEEAL
RQHLTKETAEMLNQLHIKSSGCFLYLERVLDGVVENFIMLREIRDIPGTLNGLYLWLCQRLFVRKQFAKV
QPILNVILAACRPLTITELYHAVWTKNMSLTLEDFQRKLDILSKLLVDGLGNTKILFHYSFAEWLLDVKH
CTQKYLCNAAEGHRMLAMSYTCQAKNLTPLEAQEFALHLINSNLQLETAELALWMIWNGTPVRDSLSTLI
PKEQEVLQLLVKAGAHVNSEDDRTSCIVRQALEREDSIRTLLDNGASVNQCDSNGRTLLANAAYSGSLDV
VNLLVSRGADLEIEDAHGHTPLTLAARQGHTKVVNCLIGCGANINHTDQDGWTALRSAAWGGHTEVVSAL
LYAGVKVDCADADSRTALRAAAWGGHEDIVLNLLQHGAEVNKADNEGRTALIAAAYMGHREIVEHLLDHG
AEVNHEDVDGRTALSVAALCVPASKGHASVVSLLIDRGAEVDHCDKDGMTPLLVAAYEGHVDVVDLLLEG
GADVDHTDNNGRTPLLAAASMGHASVVNTLLFWGAAVDSIDSEGRTVLSIASAQGNVEVVRTLLDRGLDE
NHRDDAGWTPLHMAAFEGHRLICEALIEQGARTNEIDNDGRIPFILASQEGHYDCVQILLENKSNIDQRG
YDGRNALRVAALEGHRDIVELLFSHGADVNCKDADGRPTLYILALENQLTMAEYFLENGANVEASDAEGR
TALHVSCWQGHMEMVQVLIAYHADVNAADNEKRSALQSAAWQGHVKVVQLLIEHGAVVDHTCNQGATALC
IAAQEGHIDVVQVLLEHGADPNHADQFGRTAMRVAAKNGHSQIIKLLEKYGASSLNGCSPSPVHTMEQKP
LQSLSSKVQSLTIKSNSSGSTGGGDMQPSLRGLPNGPTHAFSSPSESPDSTVDRQKSSLSNNSLKSSKNS
SLRTTSSTATAQTVPIDSFHNLSFTEQIQQHSLPRSRSRQSIVSPSSTTQSLGQSHNSPSSEFEWSQVKP
SLKSTKASKGGKSENSAKSGSAGKKAKQSNSSQPKVLEYEMTQFDRRGPIAKSGTAAPPKQMPAESQCKI
MIPSAQQEIGRSQQQFLIHQQSGEQKKRNGIMTNPNYHLQSNQVFLGRVSVPRTMQDRGHQEVLEGYPSS
ETELSLKQALKLQIEGSDPSFNYKKETPL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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