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Report for CCDS30444.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30444.1 Public Mus musculus X Psmd10 23 108 98 CCDS HistoryNCBI Gene:53380Re-query CCDS DB by CCDS ID:30444.1Re-query CCDS DB by GeneID:53380See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30444.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033805.14 ENSMUSP00000033805.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033805.14Link to Ensembl Protein Viewer:ENSMUSP00000033805.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000033805Re-query CCDS DB by Protein ID:ENSMUSP00000033805
Original member Current member NCBI NM_016883.4 NP_058579.2 Accepted alive Link to Nucleotide Sequence:NM_016883.4Link to Protein Sequence:NP_058579.2Re-query CCDS DB by Nucleotide ID:NM_016883Re-query CCDS DB by Protein ID:NP_058579Link to BLAST:NP_058579.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_058579.2 231 Q9Z2X2 231 100% 0 0

Chromosomal Locations for CCDS 30444.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 140949141 140949309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 140952147 140952313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 140952405 140952551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 140953800 140953898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 140956554 140956667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (696 nt):
ATGGAGGGGTGTGTGTCTAACATAATGATCTGTAACCTGGCCTACAGTGGGAAGCTGGATGAGTTGAAGG
AGCGCATTTTGGCTGATAAATCTCTGGCTACTAGAACTGATCAGGACAGCAGAACAGCTTTGCACTGGGC
ATGCTCAGCTGGCCATACAGAAATTGTTGAATTCTTGCTGCAACTTGGAGTGCCAGTGAATGATAAAGAT
GACGCAGGTTGGTCTCCTCTTCATATTGCTGCCTCCGCTGGCCGGGATGAGATTGTAAAAGCCCTTCTGG
TGAAAGGTGCACATGTGAATGCTGTCAATCAAAACGGCTGCACTCCACTCCATTATGCAGCTTCGAAGAA
TAGGCATGAGATTGCTGTTATGTTACTAGAAGGTGGGGCTAACCCAGATGCGAAGGACCATTACGATGCT
ACAGCAATGCACCGGGCAGCAGCCAAGGGTAACTTGAAGATGGTTCACATCCTTCTGTTCTACAAAGCAT
CCACAAACATCCAAGACACTGAGGGTAACACTCCTCTACACTTAGCCTGTGATGAAGAGAGAGTGGAAGA
GGCAAAATTTCTGGTGACTCAAGGAGCAAGTATTTACATTGAGAATAAAGAAGAAAAGACACCCCTGCAA
GTGGCCAAAGGGGGCCTGGGTTTAATACTCAAGAGACTAGCAGAAAGTGAAGAGGCTTCTATGTAG

Translation (231 aa):
MEGCVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKD
DAGWSPLHIAASAGRDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDA
TAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQ
VAKGGLGLILKRLAESEEASM


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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