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Report for CCDS30200.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30200.1 Public Mus musculus X Zfp92 23 108 98 CCDS HistoryNCBI Gene:22754Re-query CCDS DB by CCDS ID:30200.1Re-query CCDS DB by GeneID:22754See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30200.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033740.11 ENSMUSP00000033740.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033740.11Link to Ensembl Protein Viewer:ENSMUSP00000033740.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000033740Re-query CCDS DB by Protein ID:ENSMUSP00000033740
Original member Current member NCBI NM_009566.5 NP_033592.2 Accepted alive Link to Nucleotide Sequence:NM_009566.5Link to Protein Sequence:NP_033592.2Re-query CCDS DB by Nucleotide ID:NM_009566Re-query CCDS DB by Protein ID:NP_033592Link to BLAST:NP_033592.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033592.2 488 Q62396 488 100% 0 0

Chromosomal Locations for CCDS 30200.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 73419874 73419906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73420164 73420290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73421223 73421324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73421665 73422869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1467 nt):
ATGGCAGCCACTCTTCTAAGGGCAAAGCCCAAGGTGACAGTGTCTTTTGAAGATGTGTCTGTGTACTTTA
CAAAGACAGAATGGAGGCTTCTGGACCTCAAACAGAGGACCCTCTACAAGCAAGTGATGCTGGAGAACTA
CAGCCATCTGGTGTCAGTAGGATTTGCTTTCTCCAAGCCTAACCTGGTATCCCAGCTGGAGCGAGGGGAG
AAGCCCTGGATTAGAGATGATGGAATGGAGAGTGCAGCAAGATCCTGTGCTGGGAATAGGATAAAGACCA
AGACTTTGACTTCAAAACCAAAACTTTTCGGAAGAGGTCTCCTCAGAAATACCTCACGATCCTCATTGCA
GAGACGTCCTCACGATTTCAGGCCAAATCCCATTGTAAGGTACCAACACTCCAGAATCGCGGATAAGCGA
TATCTATGTCAGCAGTGTGGAAAATCCTTCAGCCGCAGCTTCAATCTCATCAAACACCGGATTATCCACA
GCAGAGAGAAACCTTATGAGTGCAGCGAGTGTGGGAAGCAGTTCCAGCGCAGCTTAGCGCTGCTGGAGCA
TCAGCGCATCCACAGCGGCGACAAGCCCTATGAATGTGGCGAGTGTGGCAAAACCTTCACGCGCAGCTCC
AACCTCGTCAAGCACCAGGTCATCCACAGCAGTGAGATGCCATTTGTGTGCCGCATGTGTGGTAAAGTGT
TCAGGCGCAGCTTCGCGCTGCTTGAGCACACGCGCATCCACAGCGGCGAGCGGCCCTTCGAGTGCACCGA
GTGCGGCAAGGCATTCAGCCGAAGCTCCAATCTCATAGAGCATCAGCGCATCCACAGTGGCCAGAAGCCC
TACATCTGCAAGGAGTGCGGGAAGGCCTTCAAGGGCGTCTCGCAGCTCATCCACCACCAGCTCATCCACC
GCGGCGACAAGCCCTTCACGTGCCATGAGTATGGCAAGGCCTTCCGAGGCCTCTCAGGGCTCAGCCAACA
CCAGCGGGTCCACAGAGGTGAGAAACCCTATGAGTGCAGCGAATGCGGCCGGGCCTTTGGTCGCCGGGCC
AACCTCTTCAAGCACCAGGTGGTGCATGGTGGGGTGCGGCTCCAGCACCGCACTCGAGGGAAGGGATTCC
AGCGCAAGCTCCTGGAGCATCTGCGGGACCTCCATGGGCAGCAGCCCCAAGAGGCTGGAGAAGGTAGCTC
CGCAGAACCCCAGCCCATCGACACCAATGAGAAGCCCCAAGTTTGTGAGCGCTGCGGCCAGGTCTTCGAG
AACAAGTTGCTGTTGTGTCGCCACTTGCGCATCCATGACGACGAAGATGACAAGAAACAGAAGCCTGTTA
TTTCGAGCACCTCAGTTTTGGAGGATAAGTCATTGCTCAGCCAACATCTGGAAGCCCAGCCCACAGAGGA
AAGCGACAGCGAAGGCAGTGTAGTTTTCGTGTATGCTGAGAAGCCCCACGGTCCATCCTCACCTTGA

Translation (488 aa):
MAATLLRAKPKVTVSFEDVSVYFTKTEWRLLDLKQRTLYKQVMLENYSHLVSVGFAFSKPNLVSQLERGE
KPWIRDDGMESAARSCAGNRIKTKTLTSKPKLFGRGLLRNTSRSSLQRRPHDFRPNPIVRYQHSRIADKR
YLCQQCGKSFSRSFNLIKHRIIHSREKPYECSECGKQFQRSLALLEHQRIHSGDKPYECGECGKTFTRSS
NLVKHQVIHSSEMPFVCRMCGKVFRRSFALLEHTRIHSGERPFECTECGKAFSRSSNLIEHQRIHSGQKP
YICKECGKAFKGVSQLIHHQLIHRGDKPFTCHEYGKAFRGLSGLSQHQRVHRGEKPYECSECGRAFGRRA
NLFKHQVVHGGVRLQHRTRGKGFQRKLLEHLRDLHGQQPQEAGEGSSAEPQPIDTNEKPQVCERCGQVFE
NKLLLCRHLRIHDDEDDKKQKPVISSTSVLEDKSLLSQHLEAQPTEESDSEGSVVFVYAEKPHGPSSP


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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