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Report for CCDS29499.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29499.1 Public Mus musculus 19 Ppp2r5b 23 108 98 CCDS HistoryNCBI Gene:225849Re-query CCDS DB by CCDS ID:29499.1Re-query CCDS DB by GeneID:225849See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29499.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000025695.9 ENSMUSP00000025695.9 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000025695.9Link to Ensembl Protein Viewer:ENSMUSP00000025695.9Re-query CCDS DB by Nucleotide ID:ENSMUST00000025695Re-query CCDS DB by Protein ID:ENSMUSP00000025695
Original member Current member NCBI NM_198168.3 NP_937811.1 Accepted alive Link to Nucleotide Sequence:NM_198168.3Link to Protein Sequence:NP_937811.1Re-query CCDS DB by Nucleotide ID:NM_198168Re-query CCDS DB by Protein ID:NP_937811Link to BLAST:NP_937811.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_937811.1 497 Q6PD28 497 100% 0 0

Chromosomal Locations for CCDS 29499.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 6228384 6228531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6228942 6229043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6229222 6229349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6230156 6230275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6230386 6230436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6230502 6230555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6230907 6231015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6231116 6231175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6232270 6232400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6232528 6232620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6232767 6232868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6233777 6233973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6234633 6234831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1494 nt):
ATGGAGACGAAGCTGCCCCCTGCGAGCACCCCCACAAGCCCCTCCTCCCCAGGGCTGTCTCCAGTGCCAC
CACCAGACAAGGTGGATGGCTTCTCCCGCAGGTCCCTCCGCAGGGCCCGGCCCCGTCGCTCACACAGCTC
TTCTCAGTTCCGCTATCAGAGCAACCAGCAAGAGCTCACTCCACTGCCCCTGCTCAAAGATGTGCCAGCC
TCTGAGTTGCATGAGTTGCTGAGCCGGAAACTGGCCCAATGTGGGGTGATGTTTGACTTCTTGGACTGCG
TGGCTGACCTCAAGGGGAAGGAGGTGAAGCGTGCAGCCCTCAATGAACTGGTGGAATGTGTGGGTTGCAC
CCGGGGTGTGCTCATCGAGCCCGTCTACCCAGACATCATCCGCATGATATCAGTAAATATCTTCCGGACC
CTGCCACCCAGCGAGAACCCTGAGTTTGACCCTGAAGAAGATGAGCCCAACCTTGAGCCCTCGTGGCCAC
ATCTGCAGCTGGTATATGAGTTTTTCCTGCGTTTCTTGGAGAGTCCAGATTTCCAGCCCTCTGTGGCCAA
GAGATACGTGGATCAAAAGTTTGTCCTAATGCTCCTGGAGCTATTTGACAGCGAGGACCCCCGGGAACGT
GAGTACCTCAAGACCATCTTGCATCGGGTGTACGGCAAGTTCCTGGGTCTCCGGGCCTACATCCGCAAAC
AGTGCAACCACATCTTCCTCCGGTTCATCTACGAGCTGGAACACTTCAATGGTGTGGCTGAGCTCTTAGA
GATCTTAGGAAGCATCATCAATGGCTTTGCGCTGCCCCTGAAGACTGAGCACAAGCAGTTCCTGGTTCGA
GTCCTGATCCCCTTGCACTCTGTCAAGTCACTATCTGTTTTTCATGCTCAGCTGGCATACTGTGTGGTGC
AGTTCCTGGAGAAGGATGCAACCTTGACAGAGCATGTTATCCGGGGGCTTCTCAAATACTGGCCTAAAAC
CTGCACCCAGAAGGAGGTGATGTTCCTGGGGGAGATGGAAGAGATTCTTGATGTCATCGAGCCCTCCCAG
TTTGTGAAGATCCAGGAGCCCCTCTTCAAGCAGGTGGCTCGCTGTGTCTCCAGCCCCCATTTCCAGGTTG
CAGAGCGGGCTCTGTATTTCTGGAACAATGAGTACATCCTGAGCCTCATTGAGGACAACTGCCACACTGT
GCTGCCTGCGGTATTTGGGACCCTCTACCAAGTGTCCAAGGAGCACTGGAATCAAACCATCGTGTCCCTG
ATCTACAACGTGCTCAAGACTTTCATGGAGATGAACGGAAAGCTGTTTGACGAGCTCACAGCCTCCTACA
AGCTGGAAAAACAACAGGAGCAGCAGAAGGCCCAGGAGCGGCAGGAGCTATGGCGAGGCTTGGAGGAACT
GCGGCTACGCCGGCTACAGGGGACCCAAGGGGCCAAGGAAGCCCCCGTCCCACGGCCTACGCCCCAGGTG
GCTGCCAGTGGGGGTCAGAGCTAG

Translation (497 aa):
METKLPPASTPTSPSSPGLSPVPPPDKVDGFSRRSLRRARPRRSHSSSQFRYQSNQQELTPLPLLKDVPA
SELHELLSRKLAQCGVMFDFLDCVADLKGKEVKRAALNELVECVGCTRGVLIEPVYPDIIRMISVNIFRT
LPPSENPEFDPEEDEPNLEPSWPHLQLVYEFFLRFLESPDFQPSVAKRYVDQKFVLMLLELFDSEDPRER
EYLKTILHRVYGKFLGLRAYIRKQCNHIFLRFIYELEHFNGVAELLEILGSIINGFALPLKTEHKQFLVR
VLIPLHSVKSLSVFHAQLAYCVVQFLEKDATLTEHVIRGLLKYWPKTCTQKEVMFLGEMEEILDVIEPSQ
FVKIQEPLFKQVARCVSSPHFQVAERALYFWNNEYILSLIEDNCHTVLPAVFGTLYQVSKEHWNQTIVSL
IYNVLKTFMEMNGKLFDELTASYKLEKQQEQQKAQERQELWRGLEELRLRRLQGTQGAKEAPVPRPTPQV
AASGGQS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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