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Report for CCDS28825.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
28825.1 Public Mus musculus 17 Abcc10 23 108 98 CCDS HistoryNCBI Gene:224814Re-query CCDS DB by CCDS ID:28825.1Re-query CCDS DB by GeneID:224814See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 28825.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000095261.9 ENSMUSP00000092895.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000095261.9Link to Ensembl Protein Viewer:ENSMUSP00000092895.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000095261Re-query CCDS DB by Protein ID:ENSMUSP00000092895
Original member Current member NCBI NM_145140.2 NP_660122.1 Accepted alive Link to Nucleotide Sequence:NM_145140.2Link to Protein Sequence:NP_660122.1Re-query CCDS DB by Nucleotide ID:NM_145140Re-query CCDS DB by Protein ID:NP_660122Link to BLAST:NP_660122.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_660122.1 1460 Q8R4P9-2 1460 100% 0 0

Chromosomal Locations for CCDS 28825.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 46303490 46303652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46303913 46304025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46304157 46304254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46304330 46304475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46305401 46305666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46305961 46306121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46306549 46306718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46306957 46307300 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46310038 46310233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46310377 46310530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46312290 46312487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46312835 46312912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46313631 46313820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46314216 46314314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46315384 46315555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46316557 46316636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46321553 46321662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46322137 46322293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46323352 46323579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46323693 46324952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4383 nt):
ATGATCTGCGGTCTTCTTTTCTTCTCTTTCTTTCCCAGGACTACCAATCACTCCCCAGCTCTCAATCCTG
GCTGGCGCCTCCGACTCGCAGCATCCTTCCTCCTTTCCATCTTCCCACTGCTAGACCTCCTTCCAGTTGT
TTTGCCTCCAGGGTCACGCCCAGGGCCCTTATGGCTAGAGGTGCTAGCAGGGTGTGTGACAGCTGTGGCC
TGGTTCACCCACAGCCTGGCCCTGTGGGCACTGGTTCATTCCCCTCATGGCCGTTCCCGTGGACCCTTGG
CCTTGGCTCTGGCAGCCTTTCTACCAACCCCGGCCCTGGTACTAACTCTGCTGTGGCATTGCCAGCGAGG
TACATTTCTGCCCCCACTTCTCCCAGGACCTCTGGGCCGTGTGTGTCTTCTCATTCTGCAACTGGCAGCA
GTCTTGGCCTATGGGTTGGGCTGGGCAGCCCCTGGGGGACCACAAGAGCCCTGGACTCATGATCCCTTCC
TGTCCTCTGAGAGTCAAGAAACAGAGGTAGCTGAAGATGGAGAGAGTTGGCTGTCACGCTTTTCCTATGC
CTGGTTGGCACCCTTGCTTGCTCGTGGAGTCCGAGGAGAGCTCCAGCAGCCCCGGGACACTTGCCGCCTC
CCCCGCAGGCTGCATCCTGCCTTCCTGGCCCGAGTTTTCCAAGCACATTGGAAGGAGGGGGCCCAACTGT
GGAGGGCCCTGTACAGGGCCTTTGGATGTTGCTACCTGGCCCTTGGACTGTTGAAGATGGTGGGGACCAT
GCTGGGATTCTCCGGGCCTCTGCTGCTCTCCCTCCTGGTGGGCTTCCTGGAGGAAGGTCAAGAGCCTCTA
AGCCACGGCCTGCTCTATGTCCTGGGGTTGGCTGGTGGGACTGTGATAAGTGCTGTGCTGCAGAATCAGT
ATGGGTATGAGGTCCGTAAAGTGACACTTCAGGCACGAGTGGCTGTGCTGAGCACCCTCTACCGCAAAGC
CCTGAAGCTTGGGCCCAGCCGCCCTCCCACCGGGGAGGTCCTGAACCTACTAGGCACCGACTCCGAGAGG
CTGCTCAACTTTGCTGGCAGCTTCCATGAGGCCTGGGGCCTGCCTCTGCAGCTGGCCATCACTCTCTACC
TGCTGTACCAGCAGGTGGGCATGGCCTTCCTGGCTGGGCTGGTCTTGGCGCTGCTGCTGGTACCTGTCAA
CAAAGTGATTGCCACCCGAATCATGGCCAGCAACCAGGAGATGCTACGGCACAAGGATGCACGGGTTAAG
CTCATGACAGAGTTACTGAGTGGCATTCGAGTCATCAAATTCTTCAGGTGGGAGCAGGCTCTGGGGGACC
GAGTGAAGGCTTGCCGGACTAAAGAGCTGGGACGACTCCGTGTTATCAAATACTTGGATGCAGCCTGTGT
GTACCTCTGGGCTGCCCTGCCAGTGGTCATCTGCATCACCATCTTCATCACCTATGTCCTCATGGGGCAC
CAGCTCACTGCCACCAAGGTGTTTACAGCGCTGGCGCTTGTGCGCATGCTCATTCTTCCTCTCAACAACT
TCCCCTGGGTGATCAATGGTCTCTTGGAATCCAAAGTATCCCTGGACCGGATCCAGCGTTTCCTCGATCT
TCCAAGCTACAGCCCTGAGGCCTATTACAGTCCTGATCCCCCCGCAGAGCCCTCCACAGCACTGGAGCTG
CACGAGGCCCTGTTCTCCTGGGACCCAATTGGAGCAAGCCAGAAGACCTTCATCAGTCACCTCCAAGTGA
AAAAGGGTATGCTGGTGGGCATCGTGGGAAAGGTGGGCTGTGGGAAGAGTTCGCTGCTGGCCGCCATCAC
TGGGGAGCTCCACAGGCTGTGTGGATGGGTGGCAGTGTCAGAACTGTCCAAAGGCTTTGGACTAGCCACC
CAGGAACCCTGGATCCAGTGTGCCACCATCCGAGACAACATCCTCTTTGGGAAGACATTTGATGCTCAAC
TATACAGGGAGGTTCTGGAGGCCTGCGCCCTCAATGATGATCTAAGTATCCTGCCTGCTGGAGACCAGAC
AGAGGTTGGAGAGAAAGGTGTGACCCTCAGCGGGGGACAGAGGGCCCGGATTGCACTTGCCCGTGCTGTC
TACCAGGAGAAAGCACTCTATCTCCTCGACGACCCTCTGGCTGCTGTGGATGCAGATGTGGCCAACCACC
TGTTACACAGGTGCATCCTGGGAGTGCTGAGCCACACCACCCGGCTGCTGTGCACCCACCGCACTGAGTA
CCTGGAAAGGGCTGATGTGGTGCTGTTGATGGAAGCCGGGCAATTGGTCCGAACAGGGCCTCCCTCTGAG
ATCCTGCCGCTGGTACAAGCTGTCCCCACAGCCTGGGCTGAGAAGGAACAAGTGGCTACCTCAGGCCAGT
CCCCATCTGTATGCGACCTGGAGAGAACCACCGAGGAGGAGTTGGAGGTGGAACAGAGCACATGCGGCTG
CCTCGTGCAGGAGGAAAGCAAAAGCGAGGGCGCCGTAGCCCTGCACGTCTACCGAGCATACTGGAGGGCC
ATGGGCAGCGGCCTGGCCGCCGCCATCCTCGTCTCTCTGCTCCTCATGCAAGCCACGCGCAACGGTGCTG
ATTGGTGGCTCGCTCACTGGCTGTCTCAGCTGAAGGCCGGCAGAAATGGATCCAGGGAGGATCCAGCTTC
CTGCAGCCCAGGCTCCACAGCACTCTTCTCCCCACGGCTGCTTCTCTTCTCCCCTGGAAACCTCTACACC
CCACTGCTCAGCACCCCACTGCACAAGGCTGCTTCCAATGGCACCGCAGACGTCCACTTCTACCTCATCG
TGTATGCAACCATTGCAGGGGTGAACTCCCTCTGCACCCTTCTCCGGGCTGTGCTCTTTGCAGCAGGCGC
CCTTCAAGCAGCTGCCAGCCTACACCACCGCCTACTGCATCGACTCCTCATGGCACCGGTGACTTTCTAT
GACTCCACACCTTCCGGCCGGGTCTTGAACCGCTTCTCATCAGACGTAGCCTGTGTAGACGACAGCCTGC
CCTTCCTCCTCAACATCCTGCTGGCCAATTCCGTGGGCCTGCTGGGCCTCCTGGCTGTCCTAGGTTCTGG
TCTGCCCTGGCTGCTGCTCCTGCTACCACCTCTGAGCTTCGTCTACTACAGCGTGCAGGGCTACTACAGG
GCTTCCTTCCGGGAGCTACGGCGCCTGGGCAGCCTCACCTGGTCTCCGCTCTACTCCCATCTGGCTGACA
CCCTGGCAGGCCTCCCTGTGCTCCGGGCTGCAGGGGCCACTTACAGGTTTGAAGAGGAGAACCAGCGACT
CTTGGAGCTGAACCAGAGGTGCCAGTTTGCTTCCTATGCCACGATGCAGTGGTTGGACATTCGACTGCAG
CTCATGGGGGCAGCAGTGGTCAGCGCCATTGCGGGCATTGCCCTGGTGCAGCACCAGCAGGGCCTTGCCA
ACCCAGGGCTGGTGGGCCTCGTGCTTTCTTATGCCCTGTCTCTGACGGGCCTGCTCTCGGGTCTGGTGAG
CAGTTTCACACAGACGGAAGCCATGATGGTGAGCGTCGAGCGACTGGAGGAGTATTCCTGTGACGTTCCC
CAGGAGCCCCACAGCCAGCCACTGCAGTCACCCCACCAGCAGCGCATCAGCTGGCTGACCCAGGGAAGTG
TGGAATTCCAGGACGTGGTGCTGGTGTACCGGCCAGGGCTGCCAAATGCCCTAGATGGGGTGACCTTCCG
TGTGGAGCCTGGAGAGAAGCTGGGCATCGTGGGCCGCACAGGCTCCGGCAAGTCTTCCCTGTTTCTGGTG
CTCTTCCGGCTGCTGGAGCCCAACGCAGGGCGAGTGCTCCTGGACAATGTGGACACCAGCCAGCTGGAGC
TGGCCGAGCTCAGATCCCAGCTGGCTGTCATCCCTCAGGAGCCTTTCCTGTTCAGCGGGACTATTCGGGA
GAACCTGGACCCCCAGGGCCTACACGAGGACAGGGCCCTGTGGCAAGCCTTGGAACAGTGTCACCTGAGT
GAGGTGGCTGTCGCCATGGGTGGCCTGGATGGAGAGCTGGGAGAAAGGGGCCAGAACCTGTCCCTAGGAC
AGAGACAGCTGCTGTGTCTGGCAAGGGCTCTTCTTACAGATGCTAAAATCTTGTGCATTGACGAGGCCAC
AGCAAGTGTGGACCAGAAGACAGACCAGCTGCTCCAGCAAACCATCTGTAAACGCTTTGCCAACAAGACA
GTGCTGACCATCGCCCACAGGCTCAACACGATCCTAAACTCTGACCGTGTGCTGGTGCTCCAAGCCGGGA
GGGTGGTGGAACTGGACTCCCCCTCAGCCCTGCGCAACCAGCCGCACTCCCTGTTCCAGCAGCTCCTGCA
GAGCAGCCAGCAGGGAGCCCACTCCGGACCTTCAGGGTGCTGA

Translation (1460 aa):
MICGLLFFSFFPRTTNHSPALNPGWRLRLAASFLLSIFPLLDLLPVVLPPGSRPGPLWLEVLAGCVTAVA
WFTHSLALWALVHSPHGRSRGPLALALAAFLPTPALVLTLLWHCQRGTFLPPLLPGPLGRVCLLILQLAA
VLAYGLGWAAPGGPQEPWTHDPFLSSESQETEVAEDGESWLSRFSYAWLAPLLARGVRGELQQPRDTCRL
PRRLHPAFLARVFQAHWKEGAQLWRALYRAFGCCYLALGLLKMVGTMLGFSGPLLLSLLVGFLEEGQEPL
SHGLLYVLGLAGGTVISAVLQNQYGYEVRKVTLQARVAVLSTLYRKALKLGPSRPPTGEVLNLLGTDSER
LLNFAGSFHEAWGLPLQLAITLYLLYQQVGMAFLAGLVLALLLVPVNKVIATRIMASNQEMLRHKDARVK
LMTELLSGIRVIKFFRWEQALGDRVKACRTKELGRLRVIKYLDAACVYLWAALPVVICITIFITYVLMGH
QLTATKVFTALALVRMLILPLNNFPWVINGLLESKVSLDRIQRFLDLPSYSPEAYYSPDPPAEPSTALEL
HEALFSWDPIGASQKTFISHLQVKKGMLVGIVGKVGCGKSSLLAAITGELHRLCGWVAVSELSKGFGLAT
QEPWIQCATIRDNILFGKTFDAQLYREVLEACALNDDLSILPAGDQTEVGEKGVTLSGGQRARIALARAV
YQEKALYLLDDPLAAVDADVANHLLHRCILGVLSHTTRLLCTHRTEYLERADVVLLMEAGQLVRTGPPSE
ILPLVQAVPTAWAEKEQVATSGQSPSVCDLERTTEEELEVEQSTCGCLVQEESKSEGAVALHVYRAYWRA
MGSGLAAAILVSLLLMQATRNGADWWLAHWLSQLKAGRNGSREDPASCSPGSTALFSPRLLLFSPGNLYT
PLLSTPLHKAASNGTADVHFYLIVYATIAGVNSLCTLLRAVLFAAGALQAAASLHHRLLHRLLMAPVTFY
DSTPSGRVLNRFSSDVACVDDSLPFLLNILLANSVGLLGLLAVLGSGLPWLLLLLPPLSFVYYSVQGYYR
ASFRELRRLGSLTWSPLYSHLADTLAGLPVLRAAGATYRFEEENQRLLELNQRCQFASYATMQWLDIRLQ
LMGAAVVSAIAGIALVQHQQGLANPGLVGLVLSYALSLTGLLSGLVSSFTQTEAMMVSVERLEEYSCDVP
QEPHSQPLQSPHQQRISWLTQGSVEFQDVVLVYRPGLPNALDGVTFRVEPGEKLGIVGRTGSGKSSLFLV
LFRLLEPNAGRVLLDNVDTSQLELAELRSQLAVIPQEPFLFSGTIRENLDPQGLHEDRALWQALEQCHLS
EVAVAMGGLDGELGERGQNLSLGQRQLLCLARALLTDAKILCIDEATASVDQKTDQLLQQTICKRFANKT
VLTIAHRLNTILNSDRVLVLQAGRVVELDSPSALRNQPHSLFQQLLQSSQQGAHSGPSGC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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